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The map label for this gene is yybR [H]

Identifier: 17546857

GI number: 17546857

Start: 2318579

End: 2318956

Strand: Direct

Name: yybR [H]

Synonym: RSc2138

Alternate gene names: 17546857

Gene position: 2318579-2318956 (Clockwise)

Preceding gene: 17546856

Following gene: 17546858

Centisome position: 62.39

GC content: 60.05

Gene sequence:

>378_bases
GTGTGCGGGATCGTGGACGATCCGTACGCGGAGTTTCATGTCGTGCTGGAAGTCCTCGACCGGGTTGGGGACAAATGGAC
AGTGACCGCAATCGGCGCTTTATCGGAAGGGCCGATGCGCTTCAATGCCATCATGCGCGCAATCAGGGGCATCTCTCACC
GCATGCTGACGCTCACGCTCCGTGGTCTCGAACGCGATGGCCTTGTCAGCCGGACCGTCTACGCAACGGTTCCGCCGAAA
GTCGAATATGAACTGACCGAAGTCGGCCGCTCCCTGATTGAACCGCTGCGGACGCTTGCAAACTGGGCGCTGGAGAATCG
CATAGAGATTGAAGCGGCACGCGCCCTGTTCGACACGGAAAAAGCGCGAGCCGACTGA

Upstream 100 bases:

>100_bases
GCGCGATCCGTGCAACCCAGCTTAACCGCGCATTGCGATGGATTTGGCCATGGAAACAAAAAGTCGGGCATTGACAACTG
CGGCGGCACAGGAAAAGCCG

Downstream 100 bases:

>100_bases
CGCATTGGCGTTGGCAGGGAACGCCATTAACGGATGGCTTCACTGTCGGCAGACGTGATTTCAGACCGTCGTCCACAATT
CGTCTCTGATCGTCTTCTCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 125; Mature: 125

Protein sequence:

>125_residues
MCGIVDDPYAEFHVVLEVLDRVGDKWTVTAIGALSEGPMRFNAIMRAIRGISHRMLTLTLRGLERDGLVSRTVYATVPPK
VEYELTEVGRSLIEPLRTLANWALENRIEIEAARALFDTEKARAD

Sequences:

>Translated_125_residues
MCGIVDDPYAEFHVVLEVLDRVGDKWTVTAIGALSEGPMRFNAIMRAIRGISHRMLTLTLRGLERDGLVSRTVYATVPPK
VEYELTEVGRSLIEPLRTLANWALENRIEIEAARALFDTEKARAD
>Mature_125_residues
MCGIVDDPYAEFHVVLEVLDRVGDKWTVTAIGALSEGPMRFNAIMRAIRGISHRMLTLTLRGLERDGLVSRTVYATVPPK
VEYELTEVGRSLIEPLRTLANWALENRIEIEAARALFDTEKARAD

Specific function: Unknown

COG id: COG1733

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH hxlR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082391, Length=106, Percent_Identity=41.5094339622642, Blast_Score=82, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002577
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01638 DUF24 [H]

EC number: NA

Molecular weight: Translated: 14040; Mature: 14040

Theoretical pI: Translated: 5.25; Mature: 5.25

Prosite motif: PS51118 HTH_HXLR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCGIVDDPYAEFHVVLEVLDRVGDKWTVTAIGALSEGPMRFNAIMRAIRGISHRMLTLTL
CCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHH
RGLERDGLVSRTVYATVPPKVEYELTEVGRSLIEPLRTLANWALENRIEIEAARALFDTE
HCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
KARAD
HHCCC
>Mature Secondary Structure
MCGIVDDPYAEFHVVLEVLDRVGDKWTVTAIGALSEGPMRFNAIMRAIRGISHRMLTLTL
CCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHH
RGLERDGLVSRTVYATVPPKVEYELTEVGRSLIEPLRTLANWALENRIEIEAARALFDTE
HCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
KARAD
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]