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The map label for this gene is 17546834

Identifier: 17546834

GI number: 17546834

Start: 2291451

End: 2292695

Strand: Reverse

Name: 17546834

Synonym: RSc2115

Alternate gene names: NA

Gene position: 2292695-2291451 (Counterclockwise)

Preceding gene: 17546835

Following gene: 17546832

Centisome position: 61.69

GC content: 66.91

Gene sequence:

>1245_bases
ATGGAAGGCTATCTCCTCGACTGGGCCAACCTGCTGCTGCGCTGGCTGCACGTGATCACGGCGATCGCGTGGATCGGCTC
GTCGTTCTACTTCGTCTGGCTCGACAACAGCCTGACCCGGCCGAGCGCGCCGGACCTGCTGGACAAGGGCGTGGACGGCG
AGCTGTGGGCCGTGCACGGCGGCGGGTTCTACCACCCGCAGAAGTACCTGCTGGCGCCGAAGCAGCTGCCCGAACACCTG
CACTGGTTCTACTGGGAGTCGTATTCGACGTGGATGTCCGGCTTTGCGCTGCTGACGGTGGTGTACCTGTTCAACGCCAA
CGTCTACCTGATCGACCGCAGTGTGTTCGACATGACGGCGACCACAGCGGTGCTGCTGGCGCTGGCGTTCCTGGCGGTCG
GCTGGCTGGTGTACGACACCATCTGCCGCGTGTTCGGCAAGAGCGACCGGCTGGTGGGCGCGCTGGTGGCGGTCTACGTG
GTGATCGCGGCGTATGCGGCGTGCCACCTGTTCGCGGGCCGCGCGGCCTTCCTGCTGATCGGCGCGATGATCGCGACCAT
CATGAGCGCCAACGTGTTCTTCTGGATCATCCCGGGGCAGCGCAAGGTGGTGGCCGCGCTCAAGGCCGGCGAGAAGCCGG
ACCCGATCCACGGCAAGCGCGGCAAGCAGCGCAGCGTGCACAACACGTATTTCACGCTGCCGGTGCTGTTCGCCATGCTG
TCGAACCACTACAGCATGACGTACTCGCACCCATTCAACTGGGTGGTGCTGGTGCTGATCATGCTGGCCGGGGTGCTGAT
CCGCCAGTTCTTCATCCTCAAACACAAGGGCGTGTGGAACGGGTGGTATCCGGCGGGCGGCGTGGCGCTGCTGCTGGGCA
CGGCGGTGTGGCTGGCGCCGGTGCAGCGTCCGTCGGCGCCGCAGGCGAATACCGCGGCGGCTGCCACGGCGCTGGCGGCG
CAGGGCGGGGCGGCGGCATCCGGCGGCTCGGCCTTCGCCAAAGTACAGGCAGTCGTGACCGCCCGGTGCTACCAATGCCA
CTCGGCGCATCCTACGCTGATGCCATCGCCGGCCAAGGGCGTGCTGCTCGACACGCCGGAACAGCTGGCCGCGCATGCAC
AGCTCGTGTACCAGCAGGCCGTGCAGCAGAAGCTGATGCCGCTGGGCAACGTCACGCAGATGACCGACGAGGAGCGCACG
GTGATCGCCAAGTGGTTCGAGGACGGTGCCAGCACCACCCGCTGA

Upstream 100 bases:

>100_bases
GCGCTTCGGCGTGGCCGATGCCGGCGCGCACTACCACGTGCCGCTGCTGGTGTCGCCGTGGTCGTACTCGACCTATCGCG
GCAGCTGAGCGGGAGGCGTC

Downstream 100 bases:

>100_bases
CGAGGCGAGCTTGGATGATCGGAGCATGCCGTCTGCCTTCGGGCGGGCGGCATGGCCGGTGAGGGTTGAACGGGGCTGCG
GTCCCGTTTTTTTTTTTTTG

Product: hypothetical protein

Products: NA

Alternate protein names: Transmembrane Protein; Cytochrome C Subfamily; Cytochrome C Region

Number of amino acids: Translated: 414; Mature: 414

Protein sequence:

>414_residues
MEGYLLDWANLLLRWLHVITAIAWIGSSFYFVWLDNSLTRPSAPDLLDKGVDGELWAVHGGGFYHPQKYLLAPKQLPEHL
HWFYWESYSTWMSGFALLTVVYLFNANVYLIDRSVFDMTATTAVLLALAFLAVGWLVYDTICRVFGKSDRLVGALVAVYV
VIAAYAACHLFAGRAAFLLIGAMIATIMSANVFFWIIPGQRKVVAALKAGEKPDPIHGKRGKQRSVHNTYFTLPVLFAML
SNHYSMTYSHPFNWVVLVLIMLAGVLIRQFFILKHKGVWNGWYPAGGVALLLGTAVWLAPVQRPSAPQANTAAAATALAA
QGGAAASGGSAFAKVQAVVTARCYQCHSAHPTLMPSPAKGVLLDTPEQLAAHAQLVYQQAVQQKLMPLGNVTQMTDEERT
VIAKWFEDGASTTR

Sequences:

>Translated_414_residues
MEGYLLDWANLLLRWLHVITAIAWIGSSFYFVWLDNSLTRPSAPDLLDKGVDGELWAVHGGGFYHPQKYLLAPKQLPEHL
HWFYWESYSTWMSGFALLTVVYLFNANVYLIDRSVFDMTATTAVLLALAFLAVGWLVYDTICRVFGKSDRLVGALVAVYV
VIAAYAACHLFAGRAAFLLIGAMIATIMSANVFFWIIPGQRKVVAALKAGEKPDPIHGKRGKQRSVHNTYFTLPVLFAML
SNHYSMTYSHPFNWVVLVLIMLAGVLIRQFFILKHKGVWNGWYPAGGVALLLGTAVWLAPVQRPSAPQANTAAAATALAA
QGGAAASGGSAFAKVQAVVTARCYQCHSAHPTLMPSPAKGVLLDTPEQLAAHAQLVYQQAVQQKLMPLGNVTQMTDEERT
VIAKWFEDGASTTR
>Mature_414_residues
MEGYLLDWANLLLRWLHVITAIAWIGSSFYFVWLDNSLTRPSAPDLLDKGVDGELWAVHGGGFYHPQKYLLAPKQLPEHL
HWFYWESYSTWMSGFALLTVVYLFNANVYLIDRSVFDMTATTAVLLALAFLAVGWLVYDTICRVFGKSDRLVGALVAVYV
VIAAYAACHLFAGRAAFLLIGAMIATIMSANVFFWIIPGQRKVVAALKAGEKPDPIHGKRGKQRSVHNTYFTLPVLFAML
SNHYSMTYSHPFNWVVLVLIMLAGVLIRQFFILKHKGVWNGWYPAGGVALLLGTAVWLAPVQRPSAPQANTAAAATALAA
QGGAAASGGSAFAKVQAVVTARCYQCHSAHPTLMPSPAKGVLLDTPEQLAAHAQLVYQQAVQQKLMPLGNVTQMTDEERT
VIAKWFEDGASTTR

Specific function: Unknown

COG id: COG3748

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45487; Mature: 45487

Theoretical pI: Translated: 9.29; Mature: 9.29

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEGYLLDWANLLLRWLHVITAIAWIGSSFYFVWLDNSLTRPSAPDLLDKGVDGELWAVHG
CCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHCCCCCCEEEEEC
GGFYHPQKYLLAPKQLPEHLHWFYWESYSTWMSGFALLTVVYLFNANVYLIDRSVFDMTA
CCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHH
TTAVLLALAFLAVGWLVYDTICRVFGKSDRLVGALVAVYVVIAAYAACHLFAGRAAFLLI
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GAMIATIMSANVFFWIIPGQRKVVAALKAGEKPDPIHGKRGKQRSVHNTYFTLPVLFAML
HHHHHHHHCCCEEEEEECCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
SNHYSMTYSHPFNWVVLVLIMLAGVLIRQFFILKHKGVWNGWYPAGGVALLLGTAVWLAP
HCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHH
VQRPSAPQANTAAAATALAAQGGAAASGGSAFAKVQAVVTARCYQCHSAHPTLMPSPAKG
CCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
VLLDTPEQLAAHAQLVYQQAVQQKLMPLGNVTQMTDEERTVIAKWFEDGASTTR
CEECCHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MEGYLLDWANLLLRWLHVITAIAWIGSSFYFVWLDNSLTRPSAPDLLDKGVDGELWAVHG
CCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHCCCCCCEEEEEC
GGFYHPQKYLLAPKQLPEHLHWFYWESYSTWMSGFALLTVVYLFNANVYLIDRSVFDMTA
CCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHH
TTAVLLALAFLAVGWLVYDTICRVFGKSDRLVGALVAVYVVIAAYAACHLFAGRAAFLLI
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GAMIATIMSANVFFWIIPGQRKVVAALKAGEKPDPIHGKRGKQRSVHNTYFTLPVLFAML
HHHHHHHHCCCEEEEEECCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
SNHYSMTYSHPFNWVVLVLIMLAGVLIRQFFILKHKGVWNGWYPAGGVALLLGTAVWLAP
HCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHH
VQRPSAPQANTAAAATALAAQGGAAASGGSAFAKVQAVVTARCYQCHSAHPTLMPSPAKG
CCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
VLLDTPEQLAAHAQLVYQQAVQQKLMPLGNVTQMTDEERTVIAKWFEDGASTTR
CEECCHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA