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The map label for this gene is 17546790

Identifier: 17546790

GI number: 17546790

Start: 2243930

End: 2244451

Strand: Direct

Name: 17546790

Synonym: RSc2071

Alternate gene names: NA

Gene position: 2243930-2244451 (Clockwise)

Preceding gene: 17546747

Following gene: 17546797

Centisome position: 60.38

GC content: 67.43

Gene sequence:

>522_bases
ATGAAAGTGCGTTGGATCGTTCGCATGGGGGCGTCGGCCATGGCATCGGTGGCGGCCGCCGGCTGCGCGGTGCTGGCACC
CGTCCCGGCCGGCGAGGCCCTGATCGGCCAGCCCGCGTCCGTCGTGGAAGCGCGCTTCGGCAAGCCGCCCGAACAGTACC
CGCGCGCCGGCGGCGGCACGCGCTGGCTGTATCCGACCCAGCCCTACGGGCAGTTCACCTACGCCGCGGATTTCGACGCC
TCGGGGCGCCTGGTGTCATTCCGGCAGATCCTGACCACGCTGGATTTCGCGCAGATCCGCGTCGGCACCTCGACGCAGCA
GGATGTGCTGCGGATGTTCGGCAAGCCCGAGGAGACCGCCTACTTCCGCCTGATGGACCGGCAGGTGTGGTCCTATCGTT
TTAAGCAGGAAGGCGTGTGGCCGTCACTGATGCACTTCTATTTCGACCGCGACGGCATCGTCCGGCTCACGCAGATCAGC
CCCGACCCGATGTACGACCACGATGCGAACTCGCGCTGCTGA

Upstream 100 bases:

>100_bases
CATATGGAACTCCCCGTGAGGAGCGGATGGTAAGGCGTGGCGCCGCGCCGGCACAAGCCGCGTTCCGCCCTACACTCAAG
GCATTGCAGGAGGCCGCATC

Downstream 100 bases:

>100_bases
GCGCGCCGCAACGGCAACATCCACGCGAGGCGCCTGGCCTGGCGTGGATGCTCGGGTCGGCCATGCCGTGGATCGCACGG
GCATTGCCTTTCAAAGGCGG

Product: hypothetical protein

Products: NA

Alternate protein names: Lipoprotein Transmembrane; Transmembrane Protein; Transmembrane Lipoprotein; Exported Protein

Number of amino acids: Translated: 173; Mature: 173

Protein sequence:

>173_residues
MKVRWIVRMGASAMASVAAAGCAVLAPVPAGEALIGQPASVVEARFGKPPEQYPRAGGGTRWLYPTQPYGQFTYAADFDA
SGRLVSFRQILTTLDFAQIRVGTSTQQDVLRMFGKPEETAYFRLMDRQVWSYRFKQEGVWPSLMHFYFDRDGIVRLTQIS
PDPMYDHDANSRC

Sequences:

>Translated_173_residues
MKVRWIVRMGASAMASVAAAGCAVLAPVPAGEALIGQPASVVEARFGKPPEQYPRAGGGTRWLYPTQPYGQFTYAADFDA
SGRLVSFRQILTTLDFAQIRVGTSTQQDVLRMFGKPEETAYFRLMDRQVWSYRFKQEGVWPSLMHFYFDRDGIVRLTQIS
PDPMYDHDANSRC
>Mature_173_residues
MKVRWIVRMGASAMASVAAAGCAVLAPVPAGEALIGQPASVVEARFGKPPEQYPRAGGGTRWLYPTQPYGQFTYAADFDA
SGRLVSFRQILTTLDFAQIRVGTSTQQDVLRMFGKPEETAYFRLMDRQVWSYRFKQEGVWPSLMHFYFDRDGIVRLTQIS
PDPMYDHDANSRC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19438; Mature: 19438

Theoretical pI: Translated: 9.04; Mature: 9.04

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVRWIVRMGASAMASVAAAGCAVLAPVPAGEALIGQPASVVEARFGKPPEQYPRAGGGT
CCEEEEEECCHHHHHHHHHCCCEEEECCCCCCHHHCCCHHHHHHHCCCCHHHCCCCCCCC
RWLYPTQPYGQFTYAADFDASGRLVSFRQILTTLDFAQIRVGTSTQQDVLRMFGKPEETA
EECCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHEEECCCCHHHHHHHHCCCCHHH
YFRLMDRQVWSYRFKQEGVWPSLMHFYFDRDGIVRLTQISPDPMYDHDANSRC
HHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCC
>Mature Secondary Structure
MKVRWIVRMGASAMASVAAAGCAVLAPVPAGEALIGQPASVVEARFGKPPEQYPRAGGGT
CCEEEEEECCHHHHHHHHHCCCEEEECCCCCCHHHCCCHHHHHHHCCCCHHHCCCCCCCC
RWLYPTQPYGQFTYAADFDASGRLVSFRQILTTLDFAQIRVGTSTQQDVLRMFGKPEETA
EECCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHEEECCCCHHHHHHHHCCCCHHH
YFRLMDRQVWSYRFKQEGVWPSLMHFYFDRDGIVRLTQISPDPMYDHDANSRC
HHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA