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The map label for this gene is ureF

Identifier: 17546749

GI number: 17546749

Start: 2204750

End: 2205439

Strand: Reverse

Name: ureF

Synonym: RSc2030

Alternate gene names: 17546749

Gene position: 2205439-2204750 (Counterclockwise)

Preceding gene: 17546750

Following gene: 17546748

Centisome position: 59.34

GC content: 73.04

Gene sequence:

>690_bases
ATGACTAGCGCCGCGCAGCTGACCGCGTTGCTGCACCTCGCCTCACCGGCGCTGCCGGTGGGGGCGTTCAGCTATTCGCA
GGGGCTGGAAGCGGCGGTGGAGGCGCGCCACGTGCACGATGAGGCGTCCGCCGCGCGATGGATCGCCGAAGGGCTGGCGG
TGCTGGCCGCCTGCGAGGCGCCGTTGTGGCTGCTGCAGTACGCCGACTGGCAGGCCGGCCGCCTGGACGCGGTGGCCGAG
CGCGACGGCTGGTTTCTGGCCACGCGCGAGACCCGCGAACTGCGGCTGGAGACCGCGCAGATGGGCTGGTCGCTCGCCCG
CCTGATCGCGCAGATGGGGTGGGGCGCCCCGGCCATGCGCGATGCGTTGGCCGCCCGTGCCGCCATCACGTTCCCGACCG
CCTTTGCCGCCGCCGCCGTCGCGCTGGGCATCGAAGCACGCGACGGCCTCACCGCGTACAGCTTCGCCTGGGTGGAAAAC
CAGGTGGCCGCGGCGGTCAAGGCCATTCCGCTGGGGCAGGCGGCCGGCCAGCGCATCCTGTTCGGCCTGCATGCGGCGGT
GGGGCAGGCGGCGGAAGACGCCGCGCGGCGCGCAGCCTGCCATCCGCCCGAACTCTCGACCTTCTCGCCCGGGCTCGGTG
TCCTGTCGGCCCGGCACGAGACGCAATACTCACGACTCTTCCGTTCCTGA

Upstream 100 bases:

>100_bases
GACCGCGGTTGCGATCACAGCCACAGCCACAGCCACGATCACGATCACGATCACGGCCATGTGCACGGCCCCGGCTGCGG
TCACGCGCCTCACCATCGCC

Downstream 100 bases:

>100_bases
ACCTCATCATGCGTACCAAGAAACTGCCCGCCCTGCGCGTCGGCGTGGGCGGCCCCGTCGGTTCCGGCAAGACCACGCTG
CTGGAGATGCTGTGCAAGGC

Product: urease accessory protein UreF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 229; Mature: 228

Protein sequence:

>229_residues
MTSAAQLTALLHLASPALPVGAFSYSQGLEAAVEARHVHDEASAARWIAEGLAVLAACEAPLWLLQYADWQAGRLDAVAE
RDGWFLATRETRELRLETAQMGWSLARLIAQMGWGAPAMRDALAARAAITFPTAFAAAAVALGIEARDGLTAYSFAWVEN
QVAAAVKAIPLGQAAGQRILFGLHAAVGQAAEDAARRAACHPPELSTFSPGLGVLSARHETQYSRLFRS

Sequences:

>Translated_229_residues
MTSAAQLTALLHLASPALPVGAFSYSQGLEAAVEARHVHDEASAARWIAEGLAVLAACEAPLWLLQYADWQAGRLDAVAE
RDGWFLATRETRELRLETAQMGWSLARLIAQMGWGAPAMRDALAARAAITFPTAFAAAAVALGIEARDGLTAYSFAWVEN
QVAAAVKAIPLGQAAGQRILFGLHAAVGQAAEDAARRAACHPPELSTFSPGLGVLSARHETQYSRLFRS
>Mature_228_residues
TSAAQLTALLHLASPALPVGAFSYSQGLEAAVEARHVHDEASAARWIAEGLAVLAACEAPLWLLQYADWQAGRLDAVAER
DGWFLATRETRELRLETAQMGWSLARLIAQMGWGAPAMRDALAARAAITFPTAFAAAAVALGIEARDGLTAYSFAWVENQ
VAAAVKAIPLGQAAGQRILFGLHAAVGQAAEDAARRAACHPPELSTFSPGLGVLSARHETQYSRLFRS

Specific function: Required for maturation of urease via the functional incorporation of the urease nickel metallocenter

COG id: COG0830

COG function: function code O; Urease accessory protein UreF

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ureF family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): UREF_RALSO (Q8XXT3)

Other databases:

- EMBL:   AL646052
- RefSeq:   NP_520151.1
- GeneID:   1220870
- GenomeReviews:   AL646052_GR
- KEGG:   rso:RSc2030
- NMPDR:   fig|267608.1.peg.2030
- HOGENOM:   HBG709295
- OMA:   SPQLPIG
- ProtClustDB:   CLSK897184
- BioCyc:   RSOL267608:RSC2030-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_01385
- InterPro:   IPR002639
- PIRSF:   PIRSF009467

Pfam domain/function: PF01730 UreF

EC number: NA

Molecular weight: Translated: 24274; Mature: 24143

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSAAQLTALLHLASPALPVGAFSYSQGLEAAVEARHVHDEASAARWIAEGLAVLAACEA
CCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PLWLLQYADWQAGRLDAVAERDGWFLATRETRELRLETAQMGWSLARLIAQMGWGAPAMR
CHHHHHHCCCCCCCCHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
DALAARAAITFPTAFAAAAVALGIEARDGLTAYSFAWVENQVAAAVKAIPLGQAAGQRIL
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHCHHHH
FGLHAAVGQAAEDAARRAACHPPELSTFSPGLGVLSARHETQYSRLFRS
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TSAAQLTALLHLASPALPVGAFSYSQGLEAAVEARHVHDEASAARWIAEGLAVLAACEA
CCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PLWLLQYADWQAGRLDAVAERDGWFLATRETRELRLETAQMGWSLARLIAQMGWGAPAMR
CHHHHHHCCCCCCCCHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
DALAARAAITFPTAFAAAAVALGIEARDGLTAYSFAWVENQVAAAVKAIPLGQAAGQRIL
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHCHHHH
FGLHAAVGQAAEDAARRAACHPPELSTFSPGLGVLSARHETQYSRLFRS
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11823852