| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is ureE
Identifier: 17546750
GI number: 17546750
Start: 2205432
End: 2206067
Strand: Reverse
Name: ureE
Synonym: RSc2031
Alternate gene names: 17546750
Gene position: 2206067-2205432 (Counterclockwise)
Preceding gene: 17546751
Following gene: 17546749
Centisome position: 59.36
GC content: 69.81
Gene sequence:
>636_bases ATGCTGTCGATCGATAAACATCTTCCCGCGCCGCATGGCCTGGCCGCCGTGCTGGTCAGGCGCGCGCCCAAGCTGGTGCT GCCGTTCCTGGCGCGCAGCCGCAGCCGCCTGCGCGCCACGCTGGATGACGGACGCGAAGTCGCCGTCGTATTGCCGCGCG GCACCGTGATGCGCGGCGGCGACGTGCTGGTCGCCGAGGACGGTACGCTGGTGGAAGTGCAGGCCGCGCCCGAGCAGGTG CTGCGCGTCACCAGCGACAGCCGCCTGGCGCTGATGCGCGCGGCGTACCACCTCGGTAATCGCCATACGCCGGTGCAGGT GGTGGCCGACGCGCTGCAGCTCGAAGCCGACCCCGTGCTCGAAGACATGCTGGTGCGCCTGGGCGTGACCGTCACGCACG TGCAAGCCCCGTTCGAGCCCGAGGCGGGAGCCTATGGCGGCGGCCACCGTCATGGGCACGACGCCACGTTCGAGGAAGAC TACGCCGCCGCGCAGGCGCTATACCGGGAACATCACGGCCATTCGCACGACCGCGGTTGCGATCACAGCCACAGCCACAG CCACGATCACGATCACGATCACGGCCATGTGCACGGCCCCGGCTGCGGTCACGCGCCTCACCATCGCCATGACTAG
Upstream 100 bases:
>100_bases TCGATCCCGAGACCTACCAGGTCGTCGCCGACGGCATGCTGCTGACCTGCGAGCCGGCCGAGGTGCTGCCGATGGCGCAG CGCTATTTCCTGTTCTGAAC
Downstream 100 bases:
>100_bases CGCCGCGCAGCTGACCGCGTTGCTGCACCTCGCCTCACCGGCGCTGCCGGTGGGGGCGTTCAGCTATTCGCAGGGGCTGG AAGCGGCGGTGGAGGCGCGC
Product: urease accessory protein UreE
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 211; Mature: 211
Protein sequence:
>211_residues MLSIDKHLPAPHGLAAVLVRRAPKLVLPFLARSRSRLRATLDDGREVAVVLPRGTVMRGGDVLVAEDGTLVEVQAAPEQV LRVTSDSRLALMRAAYHLGNRHTPVQVVADALQLEADPVLEDMLVRLGVTVTHVQAPFEPEAGAYGGGHRHGHDATFEED YAAAQALYREHHGHSHDRGCDHSHSHSHDHDHDHGHVHGPGCGHAPHHRHD
Sequences:
>Translated_211_residues MLSIDKHLPAPHGLAAVLVRRAPKLVLPFLARSRSRLRATLDDGREVAVVLPRGTVMRGGDVLVAEDGTLVEVQAAPEQV LRVTSDSRLALMRAAYHLGNRHTPVQVVADALQLEADPVLEDMLVRLGVTVTHVQAPFEPEAGAYGGGHRHGHDATFEED YAAAQALYREHHGHSHDRGCDHSHSHSHDHDHDHGHVHGPGCGHAPHHRHD >Mature_211_residues MLSIDKHLPAPHGLAAVLVRRAPKLVLPFLARSRSRLRATLDDGREVAVVLPRGTVMRGGDVLVAEDGTLVEVQAAPEQV LRVTSDSRLALMRAAYHLGNRHTPVQVVADALQLEADPVLEDMLVRLGVTVTHVQAPFEPEAGAYGGGHRHGHDATFEED YAAAQALYREHHGHSHDRGCDHSHSHSHDHDHDHGHVHGPGCGHAPHHRHD
Specific function: Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly
COG id: COG2371
COG function: function code O; Urease accessory protein UreE
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ureE family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): UREE_RALSO (Q8XXT2)
Other databases:
- EMBL: AL646052 - RefSeq: NP_520152.1 - ProteinModelPortal: Q8XXT2 - SMR: Q8XXT2 - GeneID: 1220871 - GenomeReviews: AL646052_GR - KEGG: rso:RSc2031 - NMPDR: fig|267608.1.peg.2031 - HOGENOM: HBG635302 - OMA: DARCKSR - ProtClustDB: PRK13263 - BioCyc: RSOL267608:RSC2031-MONOMER - GO: GO:0005737 - HAMAP: MF_00822 - InterPro: IPR012406 - InterPro: IPR007864 - InterPro: IPR004029 - Gene3D: G3DSA:3.30.70.790 - PIRSF: PIRSF036402
Pfam domain/function: PF05194 UreE_C; PF02814 UreE_N; SSF69737 UreE_C; SSF69287 UreE_N
EC number: NA
Molecular weight: Translated: 23002; Mature: 23002
Theoretical pI: Translated: 6.83; Mature: 6.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSIDKHLPAPHGLAAVLVRRAPKLVLPFLARSRSRLRATLDDGREVAVVLPRGTVMRGG CCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCEEEECC DVLVAEDGTLVEVQAAPEQVLRVTSDSRLALMRAAYHLGNRHTPVQVVADALQLEADPVL CEEEECCCCEEEEECCHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHH EDMLVRLGVTVTHVQAPFEPEAGAYGGGHRHGHDATFEEDYAAAQALYREHHGHSHDRGC HHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCC DHSHSHSHDHDHDHGHVHGPGCGHAPHHRHD CCCCCCCCCCCCCCCEECCCCCCCCCCCCCC >Mature Secondary Structure MLSIDKHLPAPHGLAAVLVRRAPKLVLPFLARSRSRLRATLDDGREVAVVLPRGTVMRGG CCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCEEEECC DVLVAEDGTLVEVQAAPEQVLRVTSDSRLALMRAAYHLGNRHTPVQVVADALQLEADPVL CEEEECCCCEEEEECCHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHH EDMLVRLGVTVTHVQAPFEPEAGAYGGGHRHGHDATFEEDYAAAQALYREHHGHSHDRGC HHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCC DHSHSHSHDHDHDHGHVHGPGCGHAPHHRHD CCCCCCCCCCCCCCCEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11823852