| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is 17546741
Identifier: 17546741
GI number: 17546741
Start: 2200351
End: 2201010
Strand: Direct
Name: 17546741
Synonym: RSc2022
Alternate gene names: NA
Gene position: 2200351-2201010 (Clockwise)
Preceding gene: 17546740
Following gene: 17546742
Centisome position: 59.21
GC content: 72.42
Gene sequence:
>660_bases ATGGCACCCTCCCCCAAGCTCGCGGCCATTACGGTGGTCTCCGTGCTGGCGTTTCTCGGCCTGGCCGTGCTGGGCTGGGG CGGCCTGGCGGCCTTTCTCGCCCACCCGGCGCGCGTGGCGCTGGTGGCGGTCACCGCCGTGCTGACGGCGGCGGCGCTGT GCTCCGAAGGCAACCTCAGCGCCGGCGAGCGCGAAGACCGCGCCAACCGCTGGGTGCTGCCGGTCTTTGGCGTGATCGGC GTGCTCAGCGCCTGGCTGCCCGCCTACACCGACCGGCACGACCTCTGGAGCCTCGACGGCGACACAGCGCGCTGGCTGGG CATCGTGCTGTACGCGGCGGGCGGCGCGCTGCGGCTGTGGCCGGTGTTCGTGCTGGGCAAGCGGTTCAGCGGCCTGGTGG CGATCCAGCCGGGGCATCAGCTGGTGACCGACGGCGTGTACGGCGTGGTGCGCAACCCGAGCTACCTGGGCTTGCTGGCC AACACGCTCGGCTGGGTGCTGGCGTTCCGCTCGCTGGCGGGCGTGGTGCTCACGCTGCTGCTGATTCCGCCGCTGGTGGC CCGCATCCGCGCGGAGGAGGCGCTGCTGCGCACCCAGTTCGGCGAGGCCTACGACGCCTACTGCGCACGAACGTGGCGGC TGATCCCCGGTGTGTACTGA
Upstream 100 bases:
>100_bases GGCCCTTTTTGCTTGGGGCGCCCCCCTGCGGAAACCGCCGGCCCCGCCCGCGCCGCCTACACTGGCATGAGACCCATCCC ATTCCCGAGACGACGCGGCC
Downstream 100 bases:
>100_bases GCCGGGCGCGCGGTCATGCCCTCGCCCGCCGTCAGGCCGGCAGCGCGACGCATCGGATGTCCGGCGCCGTGTAGGGCGTC GGATACGGCGCACGCGGCCC
Product: hypothetical protein
Products: NA
Alternate protein names: Isoprenylcysteine Carboxyl Methyltransferase Family Protein; S-Isoprenylcysteine Methyltransferase-Like Protein; Protein-S-Isoprenylcysteine O-Methyltransferase
Number of amino acids: Translated: 219; Mature: 218
Protein sequence:
>219_residues MAPSPKLAAITVVSVLAFLGLAVLGWGGLAAFLAHPARVALVAVTAVLTAAALCSEGNLSAGEREDRANRWVLPVFGVIG VLSAWLPAYTDRHDLWSLDGDTARWLGIVLYAAGGALRLWPVFVLGKRFSGLVAIQPGHQLVTDGVYGVVRNPSYLGLLA NTLGWVLAFRSLAGVVLTLLLIPPLVARIRAEEALLRTQFGEAYDAYCARTWRLIPGVY
Sequences:
>Translated_219_residues MAPSPKLAAITVVSVLAFLGLAVLGWGGLAAFLAHPARVALVAVTAVLTAAALCSEGNLSAGEREDRANRWVLPVFGVIG VLSAWLPAYTDRHDLWSLDGDTARWLGIVLYAAGGALRLWPVFVLGKRFSGLVAIQPGHQLVTDGVYGVVRNPSYLGLLA NTLGWVLAFRSLAGVVLTLLLIPPLVARIRAEEALLRTQFGEAYDAYCARTWRLIPGVY >Mature_218_residues APSPKLAAITVVSVLAFLGLAVLGWGGLAAFLAHPARVALVAVTAVLTAAALCSEGNLSAGEREDRANRWVLPVFGVIGV LSAWLPAYTDRHDLWSLDGDTARWLGIVLYAAGGALRLWPVFVLGKRFSGLVAIQPGHQLVTDGVYGVVRNPSYLGLLAN TLGWVLAFRSLAGVVLTLLLIPPLVARIRAEEALLRTQFGEAYDAYCARTWRLIPGVY
Specific function: Unknown
COG id: COG2020
COG function: function code O; Putative protein-S-isoprenylcysteine methyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23371; Mature: 23240
Theoretical pI: Translated: 9.43; Mature: 9.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAPSPKLAAITVVSVLAFLGLAVLGWGGLAAFLAHPARVALVAVTAVLTAAALCSEGNLS CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCC AGEREDRANRWVLPVFGVIGVLSAWLPAYTDRHDLWSLDGDTARWLGIVLYAAGGALRLW CCCCHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHH PVFVLGKRFSGLVAIQPGHQLVTDGVYGVVRNPSYLGLLANTLGWVLAFRSLAGVVLTLL HHHHHHHHHCCEEEECCCCHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LIPPLVARIRAEEALLRTQFGEAYDAYCARTWRLIPGVY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure APSPKLAAITVVSVLAFLGLAVLGWGGLAAFLAHPARVALVAVTAVLTAAALCSEGNLS CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCC AGEREDRANRWVLPVFGVIGVLSAWLPAYTDRHDLWSLDGDTARWLGIVLYAAGGALRLW CCCCHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHH PVFVLGKRFSGLVAIQPGHQLVTDGVYGVVRNPSYLGLLANTLGWVLAFRSLAGVVLTLL HHHHHHHHHCCEEEECCCCHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LIPPLVARIRAEEALLRTQFGEAYDAYCARTWRLIPGVY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA