| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is yfcG [H]
Identifier: 17546740
GI number: 17546740
Start: 2199521
End: 2200213
Strand: Direct
Name: yfcG [H]
Synonym: RSc2021
Alternate gene names: 17546740
Gene position: 2199521-2200213 (Clockwise)
Preceding gene: 17546739
Following gene: 17546741
Centisome position: 59.18
GC content: 64.65
Gene sequence:
>693_bases ATGATCGACGTCTACAGCTGGGCCACACCCAACGGGCACAAGGTTCACATCATGCTGGAGGAATGCGGACTGCCCTACCG CGTCCATGCCGTCAACATCGGCGCTGGCGACCAGTTCAAGCCCGAGTTCCTGAAGATCAGCCCGAACAACAAGATTCCGG CCATCGTCGACCAGGACGGACCGGACGGCCAGCCGATCTCGCTGTTCGAGTCGGGGGCCATCCTGCTGTACCTCGCCGGC AAAACCGGCAAGTTCCTGCCCGAGGACGTGCGCGGCAAGTACGAGGTGCTGCAATGGCTGATGTTCCAGATGGGCGGCGT CGGCCCGATGCTCGGCCAGACGCACCACTTCCGCATCTACGCGCCCGAGAAGATCGACTACGCGATCAACCGCTATACCA ACGAGGCCAAGCGCCTGTATGGCGTGATCGACAAGCGCCTGTCGGAATCCAAGTACCTGGGCGGCCCGGACTACTCCATC GCCGACATCGCCACCTGGCCGTGGCTGCGCAGCTGGCAGAACCAGGGGATCGTGCTGTCGGACTACCCCAGGCTGCAGCG CTGGTTCGAGGCCATCGAGGCGCGCCCCGCCGTGCAGCGCGCGGTGAAGGTGCTGGCCAAGGAACGCTCGCCCCTGCAGG ACGACAAAGAACGCGAGGTGCTGTTCGGCGCGACGCAATACGCGCGCCGCTAG
Upstream 100 bases:
>100_bases TTTTGCGCGCGCGGGCTGTCTGCGCGTTTTCGCGTTCTGTGCTTGAATGGGCGGCTTGCAACGTCTCCCATCTCTCTTTT CCGCTCAGGAGCACCAACTC
Downstream 100 bases:
>100_bases GCAGCGCTGCTGCACAGGGAAAGGGGCCGCGTCGTGCGGCCCTTTTTGCTTGGGGCGCCCCCCTGCGGAAACCGCCGGCC CCGCCCGCGCCGCCTACACT
Product: GST-related protein
Products: HX; R-S-glutathione
Alternate protein names: GST-like protein yfcG [H]
Number of amino acids: Translated: 230; Mature: 230
Protein sequence:
>230_residues MIDVYSWATPNGHKVHIMLEECGLPYRVHAVNIGAGDQFKPEFLKISPNNKIPAIVDQDGPDGQPISLFESGAILLYLAG KTGKFLPEDVRGKYEVLQWLMFQMGGVGPMLGQTHHFRIYAPEKIDYAINRYTNEAKRLYGVIDKRLSESKYLGGPDYSI ADIATWPWLRSWQNQGIVLSDYPRLQRWFEAIEARPAVQRAVKVLAKERSPLQDDKEREVLFGATQYARR
Sequences:
>Translated_230_residues MIDVYSWATPNGHKVHIMLEECGLPYRVHAVNIGAGDQFKPEFLKISPNNKIPAIVDQDGPDGQPISLFESGAILLYLAG KTGKFLPEDVRGKYEVLQWLMFQMGGVGPMLGQTHHFRIYAPEKIDYAINRYTNEAKRLYGVIDKRLSESKYLGGPDYSI ADIATWPWLRSWQNQGIVLSDYPRLQRWFEAIEARPAVQRAVKVLAKERSPLQDDKEREVLFGATQYARR >Mature_230_residues MIDVYSWATPNGHKVHIMLEECGLPYRVHAVNIGAGDQFKPEFLKISPNNKIPAIVDQDGPDGQPISLFESGAILLYLAG KTGKFLPEDVRGKYEVLQWLMFQMGGVGPMLGQTHHFRIYAPEKIDYAINRYTNEAKRLYGVIDKRLSESKYLGGPDYSI ADIATWPWLRSWQNQGIVLSDYPRLQRWFEAIEARPAVQRAVKVLAKERSPLQDDKEREVLFGATQYARR
Specific function: Has disulfide bond reductase activity (in vitro). Has low hydroperoxidase activity with cumene hydroperoxide. Has very low glutathione-S-transferase activity (in vitro) [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 GST N-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI1788640, Length=213, Percent_Identity=57.2769953051643, Blast_Score=242, Evalue=1e-65, Organism=Escherichia coli, GI87082195, Length=227, Percent_Identity=43.6123348017621, Blast_Score=176, Evalue=1e-45, Organism=Escherichia coli, GI87081789, Length=204, Percent_Identity=27.9411764705882, Blast_Score=74, Evalue=1e-14, Organism=Saccharomyces cerevisiae, GI6324100, Length=235, Percent_Identity=32.7659574468085, Blast_Score=126, Evalue=4e-30, Organism=Drosophila melanogaster, GI17933730, Length=228, Percent_Identity=26.3157894736842, Blast_Score=79, Evalue=2e-15, Organism=Drosophila melanogaster, GI17864598, Length=206, Percent_Identity=30.0970873786408, Blast_Score=78, Evalue=4e-15, Organism=Drosophila melanogaster, GI28571670, Length=175, Percent_Identity=26.2857142857143, Blast_Score=78, Evalue=4e-15, Organism=Drosophila melanogaster, GI17864592, Length=195, Percent_Identity=28.7179487179487, Blast_Score=76, Evalue=2e-14, Organism=Drosophila melanogaster, GI24646249, Length=163, Percent_Identity=29.4478527607362, Blast_Score=72, Evalue=2e-13, Organism=Drosophila melanogaster, GI19922160, Length=215, Percent_Identity=25.1162790697674, Blast_Score=72, Evalue=3e-13, Organism=Drosophila melanogaster, GI85725204, Length=194, Percent_Identity=26.8041237113402, Blast_Score=71, Evalue=7e-13, Organism=Drosophila melanogaster, GI17737923, Length=194, Percent_Identity=26.8041237113402, Blast_Score=71, Evalue=7e-13, Organism=Drosophila melanogaster, GI17864594, Length=192, Percent_Identity=27.6041666666667, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI20130115, Length=198, Percent_Identity=27.2727272727273, Blast_Score=67, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010987 - InterPro: IPR004045 - InterPro: IPR017933 - InterPro: IPR004046 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00043 GST_C; PF02798 GST_N [H]
EC number: 2.5.1.18
Molecular weight: Translated: 26252; Mature: 26252
Theoretical pI: Translated: 8.81; Mature: 8.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDVYSWATPNGHKVHIMLEECGLPYRVHAVNIGAGDQFKPEFLKISPNNKIPAIVDQDG CCCEEECCCCCCCEEEEEEHHCCCCEEEEEEEECCCCCCCCCEEEECCCCCCCEEEECCC PDGQPISLFESGAILLYLAGKTGKFLPEDVRGKYEVLQWLMFQMGGVGPMLGQTHHFRIY CCCCCEEEECCCEEEEEEECCCCCCCCHHHCCHHHHHHHHHHHHCCCCCCCCCCCEEEEE APEKIDYAINRYTNEAKRLYGVIDKRLSESKYLGGPDYSIADIATWPWLRSWQNQGIVLS CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCHHHHHHCCCCEEEE DYPRLQRWFEAIEARPAVQRAVKVLAKERSPLQDDKEREVLFGATQYARR CCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCHHEEECCHHHHCC >Mature Secondary Structure MIDVYSWATPNGHKVHIMLEECGLPYRVHAVNIGAGDQFKPEFLKISPNNKIPAIVDQDG CCCEEECCCCCCCEEEEEEHHCCCCEEEEEEEECCCCCCCCCEEEECCCCCCCEEEECCC PDGQPISLFESGAILLYLAGKTGKFLPEDVRGKYEVLQWLMFQMGGVGPMLGQTHHFRIY CCCCCEEEECCCEEEEEEECCCCCCCCHHHCCHHHHHHHHHHHHCCCCCCCCCCCEEEEE APEKIDYAINRYTNEAKRLYGVIDKRLSESKYLGGPDYSIADIATWPWLRSWQNQGIVLS CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCHHHHHHCCCCEEEE DYPRLQRWFEAIEARPAVQRAVKVLAKERSPLQDDKEREVLFGATQYARR CCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCHHEEECCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: RX; glutathione
Specific reaction: RX + glutathione = HX + R-S-glutathione
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503 [H]