| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is 17546697
Identifier: 17546697
GI number: 17546697
Start: 2152506
End: 2153327
Strand: Reverse
Name: 17546697
Synonym: RSc1978
Alternate gene names: NA
Gene position: 2153327-2152506 (Counterclockwise)
Preceding gene: 17546698
Following gene: 17546696
Centisome position: 57.94
GC content: 71.41
Gene sequence:
>822_bases ATGGGACTGTTTTCCATCTTCTCTTCCCGCAAGCCTGCCGAAAGCGCGCGTGGCGCCGCCGGCAGCGCTGCCGATGTAGC GCGCGACGCGGTGCGCGAGTCGCGGGCCGCCTCGGCATCCCGCAGCCGCGCGGCGCGGCGCGATGATGACGTCGATGACG GTCTCGATCCCGAGTTGCCGCAAAAGCAGCGCGCGCGGCGGCGCCTGATCGGCGCGGTCGTGCTGGTGGGGGCCGCCGTG GTGGTGCTGCCGCTGGTGTTCGATGCCAAGCCGCGCCCGGTGACGGACGGTGTCGCGGTCCAGATCCAGGACCAGCCGGT CGATCGCGGCGCCAAGGCGTCGGCCGATGAACCCAAGGTGGCCAGCCGCCGCTCGGCGCCGCGTGCCGACGGGGCGGCCC CGCAGCAGGCGCAGGCGCTGGATCAGGGGGAAGAGGTCGTGTCTTCCGCCGGCGGCACCTCCGCGGCGAGCACGCCGGCC GCCGCCAAGCCGTCGCCCAAGGCCGCCGCCGGCGCGACGGCAACCGATACCAAGCCGCAGGCGAAGCCTGCCGCGTCCGT CCAGGCTGCACCGGCTGCCGAAGCCAAGGACGGCAAATTCCTGCTGCTGATCGGCGCGTTCGCTTCGGAAGACCGCGCCC GCAACTGGCTGAGCAAGCTCAAGGGCGAGAAGATTCCCGGCTACATCGAGCACAAGAAGGTGCCCGAGAAGGGCGATCTG GCCTTGCTGCGTGCGGGCCCGTTCAATGATCGCGCCTCGGCGGAGATGGCACAGAAGCGCGCCGAGCAACTGGGCCTGAC GCCCAAGCTGGTGCAGCAGTGA
Upstream 100 bases:
>100_bases CCCGCGCGCACTAACGAAGACCAGGCAGCGCCGGGCGATCCGGTGCCGGTGCTGCAGCCCCTCGTTTCGCATCGTCAGAG AGCCAACCCGGGCGCAATCC
Downstream 100 bases:
>100_bases CCATGCGGCCCGATGCGCGTTTGCCAGGCCGACCGATCCGCTGCACCGTCTTCCGCCCAACCCAGCCGCCTCATGCAACC GACTTTCTTTGATTACGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: Sporulation ; Sporulation Domain-Containing Protein
Number of amino acids: Translated: 273; Mature: 272
Protein sequence:
>273_residues MGLFSIFSSRKPAESARGAAGSAADVARDAVRESRAASASRSRAARRDDDVDDGLDPELPQKQRARRRLIGAVVLVGAAV VVLPLVFDAKPRPVTDGVAVQIQDQPVDRGAKASADEPKVASRRSAPRADGAAPQQAQALDQGEEVVSSAGGTSAASTPA AAKPSPKAAAGATATDTKPQAKPAASVQAAPAAEAKDGKFLLLIGAFASEDRARNWLSKLKGEKIPGYIEHKKVPEKGDL ALLRAGPFNDRASAEMAQKRAEQLGLTPKLVQQ
Sequences:
>Translated_273_residues MGLFSIFSSRKPAESARGAAGSAADVARDAVRESRAASASRSRAARRDDDVDDGLDPELPQKQRARRRLIGAVVLVGAAV VVLPLVFDAKPRPVTDGVAVQIQDQPVDRGAKASADEPKVASRRSAPRADGAAPQQAQALDQGEEVVSSAGGTSAASTPA AAKPSPKAAAGATATDTKPQAKPAASVQAAPAAEAKDGKFLLLIGAFASEDRARNWLSKLKGEKIPGYIEHKKVPEKGDL ALLRAGPFNDRASAEMAQKRAEQLGLTPKLVQQ >Mature_272_residues GLFSIFSSRKPAESARGAAGSAADVARDAVRESRAASASRSRAARRDDDVDDGLDPELPQKQRARRRLIGAVVLVGAAVV VLPLVFDAKPRPVTDGVAVQIQDQPVDRGAKASADEPKVASRRSAPRADGAAPQQAQALDQGEEVVSSAGGTSAASTPAA AKPSPKAAAGATATDTKPQAKPAASVQAAPAAEAKDGKFLLLIGAFASEDRARNWLSKLKGEKIPGYIEHKKVPEKGDLA LLRAGPFNDRASAEMAQKRAEQLGLTPKLVQQ
Specific function: Unknown
COG id: COG3147
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28291; Mature: 28160
Theoretical pI: Translated: 10.57; Mature: 10.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLFSIFSSRKPAESARGAAGSAADVARDAVRESRAASASRSRAARRDDDVDDGLDPELP CCHHHHHHCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC QKQRARRRLIGAVVLVGAAVVVLPLVFDAKPRPVTDGVAVQIQDQPVDRGAKASADEPKV HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCH ASRRSAPRADGAAPQQAQALDQGEEVVSSAGGTSAASTPAAAKPSPKAAAGATATDTKPQ HHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCC AKPAASVQAAPAAEAKDGKFLLLIGAFASEDRARNWLSKLKGEKIPGYIEHKKVPEKGDL CCCCCCCCCCCCCCCCCCCEEEEEECHHCHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCE ALLRAGPFNDRASAEMAQKRAEQLGLTPKLVQQ EEEECCCCCCHHHHHHHHHHHHHHCCCHHHHCC >Mature Secondary Structure GLFSIFSSRKPAESARGAAGSAADVARDAVRESRAASASRSRAARRDDDVDDGLDPELP CHHHHHHCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC QKQRARRRLIGAVVLVGAAVVVLPLVFDAKPRPVTDGVAVQIQDQPVDRGAKASADEPKV HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCH ASRRSAPRADGAAPQQAQALDQGEEVVSSAGGTSAASTPAAAKPSPKAAAGATATDTKPQ HHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCC AKPAASVQAAPAAEAKDGKFLLLIGAFASEDRARNWLSKLKGEKIPGYIEHKKVPEKGDL CCCCCCCCCCCCCCCCCCCEEEEEECHHCHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCE ALLRAGPFNDRASAEMAQKRAEQLGLTPKLVQQ EEEECCCCCCHHHHHHHHHHHHHHCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA