Definition Ralstonia solanacearum GMI1000, complete genome.
Accession NC_003295
Length 3,716,413

Click here to switch to the map view.

The map label for this gene is 17546697

Identifier: 17546697

GI number: 17546697

Start: 2152506

End: 2153327

Strand: Reverse

Name: 17546697

Synonym: RSc1978

Alternate gene names: NA

Gene position: 2153327-2152506 (Counterclockwise)

Preceding gene: 17546698

Following gene: 17546696

Centisome position: 57.94

GC content: 71.41

Gene sequence:

>822_bases
ATGGGACTGTTTTCCATCTTCTCTTCCCGCAAGCCTGCCGAAAGCGCGCGTGGCGCCGCCGGCAGCGCTGCCGATGTAGC
GCGCGACGCGGTGCGCGAGTCGCGGGCCGCCTCGGCATCCCGCAGCCGCGCGGCGCGGCGCGATGATGACGTCGATGACG
GTCTCGATCCCGAGTTGCCGCAAAAGCAGCGCGCGCGGCGGCGCCTGATCGGCGCGGTCGTGCTGGTGGGGGCCGCCGTG
GTGGTGCTGCCGCTGGTGTTCGATGCCAAGCCGCGCCCGGTGACGGACGGTGTCGCGGTCCAGATCCAGGACCAGCCGGT
CGATCGCGGCGCCAAGGCGTCGGCCGATGAACCCAAGGTGGCCAGCCGCCGCTCGGCGCCGCGTGCCGACGGGGCGGCCC
CGCAGCAGGCGCAGGCGCTGGATCAGGGGGAAGAGGTCGTGTCTTCCGCCGGCGGCACCTCCGCGGCGAGCACGCCGGCC
GCCGCCAAGCCGTCGCCCAAGGCCGCCGCCGGCGCGACGGCAACCGATACCAAGCCGCAGGCGAAGCCTGCCGCGTCCGT
CCAGGCTGCACCGGCTGCCGAAGCCAAGGACGGCAAATTCCTGCTGCTGATCGGCGCGTTCGCTTCGGAAGACCGCGCCC
GCAACTGGCTGAGCAAGCTCAAGGGCGAGAAGATTCCCGGCTACATCGAGCACAAGAAGGTGCCCGAGAAGGGCGATCTG
GCCTTGCTGCGTGCGGGCCCGTTCAATGATCGCGCCTCGGCGGAGATGGCACAGAAGCGCGCCGAGCAACTGGGCCTGAC
GCCCAAGCTGGTGCAGCAGTGA

Upstream 100 bases:

>100_bases
CCCGCGCGCACTAACGAAGACCAGGCAGCGCCGGGCGATCCGGTGCCGGTGCTGCAGCCCCTCGTTTCGCATCGTCAGAG
AGCCAACCCGGGCGCAATCC

Downstream 100 bases:

>100_bases
CCATGCGGCCCGATGCGCGTTTGCCAGGCCGACCGATCCGCTGCACCGTCTTCCGCCCAACCCAGCCGCCTCATGCAACC
GACTTTCTTTGATTACGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: Sporulation ; Sporulation Domain-Containing Protein

Number of amino acids: Translated: 273; Mature: 272

Protein sequence:

>273_residues
MGLFSIFSSRKPAESARGAAGSAADVARDAVRESRAASASRSRAARRDDDVDDGLDPELPQKQRARRRLIGAVVLVGAAV
VVLPLVFDAKPRPVTDGVAVQIQDQPVDRGAKASADEPKVASRRSAPRADGAAPQQAQALDQGEEVVSSAGGTSAASTPA
AAKPSPKAAAGATATDTKPQAKPAASVQAAPAAEAKDGKFLLLIGAFASEDRARNWLSKLKGEKIPGYIEHKKVPEKGDL
ALLRAGPFNDRASAEMAQKRAEQLGLTPKLVQQ

Sequences:

>Translated_273_residues
MGLFSIFSSRKPAESARGAAGSAADVARDAVRESRAASASRSRAARRDDDVDDGLDPELPQKQRARRRLIGAVVLVGAAV
VVLPLVFDAKPRPVTDGVAVQIQDQPVDRGAKASADEPKVASRRSAPRADGAAPQQAQALDQGEEVVSSAGGTSAASTPA
AAKPSPKAAAGATATDTKPQAKPAASVQAAPAAEAKDGKFLLLIGAFASEDRARNWLSKLKGEKIPGYIEHKKVPEKGDL
ALLRAGPFNDRASAEMAQKRAEQLGLTPKLVQQ
>Mature_272_residues
GLFSIFSSRKPAESARGAAGSAADVARDAVRESRAASASRSRAARRDDDVDDGLDPELPQKQRARRRLIGAVVLVGAAVV
VLPLVFDAKPRPVTDGVAVQIQDQPVDRGAKASADEPKVASRRSAPRADGAAPQQAQALDQGEEVVSSAGGTSAASTPAA
AKPSPKAAAGATATDTKPQAKPAASVQAAPAAEAKDGKFLLLIGAFASEDRARNWLSKLKGEKIPGYIEHKKVPEKGDLA
LLRAGPFNDRASAEMAQKRAEQLGLTPKLVQQ

Specific function: Unknown

COG id: COG3147

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28291; Mature: 28160

Theoretical pI: Translated: 10.57; Mature: 10.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLFSIFSSRKPAESARGAAGSAADVARDAVRESRAASASRSRAARRDDDVDDGLDPELP
CCHHHHHHCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
QKQRARRRLIGAVVLVGAAVVVLPLVFDAKPRPVTDGVAVQIQDQPVDRGAKASADEPKV
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCH
ASRRSAPRADGAAPQQAQALDQGEEVVSSAGGTSAASTPAAAKPSPKAAAGATATDTKPQ
HHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCC
AKPAASVQAAPAAEAKDGKFLLLIGAFASEDRARNWLSKLKGEKIPGYIEHKKVPEKGDL
CCCCCCCCCCCCCCCCCCCEEEEEECHHCHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCE
ALLRAGPFNDRASAEMAQKRAEQLGLTPKLVQQ
EEEECCCCCCHHHHHHHHHHHHHHCCCHHHHCC
>Mature Secondary Structure 
GLFSIFSSRKPAESARGAAGSAADVARDAVRESRAASASRSRAARRDDDVDDGLDPELP
CHHHHHHCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
QKQRARRRLIGAVVLVGAAVVVLPLVFDAKPRPVTDGVAVQIQDQPVDRGAKASADEPKV
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCH
ASRRSAPRADGAAPQQAQALDQGEEVVSSAGGTSAASTPAAAKPSPKAAAGATATDTKPQ
HHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCC
AKPAASVQAAPAAEAKDGKFLLLIGAFASEDRARNWLSKLKGEKIPGYIEHKKVPEKGDL
CCCCCCCCCCCCCCCCCCCEEEEEECHHCHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCE
ALLRAGPFNDRASAEMAQKRAEQLGLTPKLVQQ
EEEECCCCCCHHHHHHHHHHHHHHCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA