| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is acsA [H]
Identifier: 17546671
GI number: 17546671
Start: 2129296
End: 2131278
Strand: Reverse
Name: acsA [H]
Synonym: RSc1952
Alternate gene names: 17546671
Gene position: 2131278-2129296 (Counterclockwise)
Preceding gene: 17546676
Following gene: 17546670
Centisome position: 57.35
GC content: 68.28
Gene sequence:
>1983_bases ATGGCTGGCATTGAATCTGTTCTGCAGGAAACGCGTGTCTTCGAGCCGCCCGCGTCCTTCGTCAAACAGGCCAACATCGC CGGCATGGACGCCTACCGCACCCTGTGCGCCGAGGCCGAGCGCGACTACGAAGGCTTCTGGGCGCGTCTGGCGCACGAGC ACCTGCTGTGGCACAAGCCCTTCTCCAAGGTCCTCGACGAATCCAGGGCGCCGTTCTACACCTGGTTCGAGGACGGTGAG CTCAACGCCTCGTACAACTGCCTCGAGCGCAACCTGGAGAACGGCAACGCCGACAAGGTCGCCGTGATCTTCGAGGCCGA CGATGGCTCGGTCGCGCGCATCACCTATCGCGAGCTGCATGCCCGCGTGTGCCGCTTCGCCAATGGCCTGAAGGCACTGG GCATCCGCAAGGGCGACCGCGTGGTGATCTACATGCCGATGTCGATCGAGGGCGTCGTCGCCATGCAGGCCTGCGCGCGC ATCGGGGCGACGCACTCGGTGGTGTTCGGCGGGTTCTCGGCCAAGTCGTTGCAGGAGCGGATCGTCGACGTGGGGGCCGT TGCCGTCATCACGGCCGACGAGCAGATGCGCGGCGGCAAGGCGCTGCCGCTCAAGGCCATCGCCGACGAGGCGCTGGCGA TGGAGGGCAGCGAGGCCGTCCGCCACGTGATCGTCTATCGGCGCACCGGCGCCGGCGTGAACTGGGTCGAGGGCCGCGAC CGCGCCATGGACGAAGTCGAAGCCGGCCAGCCCGACACCTGCGAGGTCACCCCGGTCGGCGCCGAGCATCCGCTGTTCAT CCTCTACACCTCGGGCTCGACCGGCAAGCCCAAGGGCGTGCAGCACAGCACCGGCGGCTACCTGCTGTGGGCGCTGCTGA CGATGCAGTGGACCTTCGACCTGAAGCCCGACGATGTCTTCTGGTGCACCGCCGACATCGGCTGGGTCACCGGCCACACC TATATCGCGTATGGCCCGCTCGCCGCCGGCGCCACCCAGGTGGTGTTCGAGGGCGTGCCGACCTACCCGAACGCCGGCCG CTTCTGGGACATGATCCAGAAGCACCGGGTCAACACCTTCTACACTGCGCCGACGGCGATCCGCTCGCTGATCAAGGCCG CCGAGGCCGATGAGACGAGCCACCCGAAGCGGTACGACCTGTCCAGCCTGCGCCTGCTGGGCACCGTGGGCGAGCCGATC AACCCGGAAGCCTGGATGTGGTACCACACGAACATCGGCGGCGGCCGCTGCCCGATCGTCGACACCTTCTGGCAGACCGA GACCGGCGGCCACATGATCTCGCCGCTGCCGGGCGCGACGCCGCTGGTGCCGGGCTCATGCACGCTGCCGCTGCCGGGCA TCATGGCCGCCATCGTCGACGAGACCGGGCAGGACCTGCCGGACGGGCAGGGCGGCATCCTCGTCGTCAAGCGGCCGTGG CCGGCGATGATCCGCACCATCTGGGGCGATCCGGAGCGCTTCCGCAAGAGCTACTTCCCGGCCGAACTGGGCGGCAAGCT CTACTTGGCCGGCGACGGCTCGGTGCGCGACAAGGAAACCGGCTACTTCACCATCATGGGCCGCATCGACGACGTGCTGA ACGTCTCGGGCCACCGCATGGGCACGATGGAGATCGAATCGGCGCTGGTGGCCAACCCGCTGGTGGCCGAGGCCGCCGTG GTGGGCCGCCCGGACGACATGACCGGCGAGGCCATCTGCGCCTTCGTGGTGCTCAAGCGCACGCGCCCGAACGGGGACGA GGCCCGGCAGATCGCCACCGACCTGCGCAACTGGGTCGGCAAGGAGATCGGCCCGATCGCCAAGCCGAAGGACATCCGCT TCGGCGACAACCTGCCCAAGACGCGCTCGGGCAAGATCATGCGGCGCCTGCTGCGCTCGATCGCCAAGGGCGAGGACATC ACGCAGGACACCTCCACGCTGGAGAACCCGGCCATCCTGGAGCAGCTCAAGGAAGCCCGCTGA
Upstream 100 bases:
>100_bases TGCGGCGGCCGGCGCACGTCGCGCTTGCGTAAGGCTGGAGTAAGGCCGGCTGCTTAGATTCGCGGCAAAACGATCACAGA CTTCGCTATCAGGAGACATC
Downstream 100 bases:
>100_bases TCCGGCACCGGCCTGTCTGCCTTGGCCGCCGCCGCCGCTGCCACGGACAGCCGCTTTCGCAGGCGGCTGTTTGTCTATTA CGGGCTGTACACCGCCGGCC
Product: acetyl-CoA synthetase
Products: NA
Alternate protein names: Acetate--CoA ligase; Acyl-activating enzyme [H]
Number of amino acids: Translated: 660; Mature: 659
Protein sequence:
>660_residues MAGIESVLQETRVFEPPASFVKQANIAGMDAYRTLCAEAERDYEGFWARLAHEHLLWHKPFSKVLDESRAPFYTWFEDGE LNASYNCLERNLENGNADKVAVIFEADDGSVARITYRELHARVCRFANGLKALGIRKGDRVVIYMPMSIEGVVAMQACAR IGATHSVVFGGFSAKSLQERIVDVGAVAVITADEQMRGGKALPLKAIADEALAMEGSEAVRHVIVYRRTGAGVNWVEGRD RAMDEVEAGQPDTCEVTPVGAEHPLFILYTSGSTGKPKGVQHSTGGYLLWALLTMQWTFDLKPDDVFWCTADIGWVTGHT YIAYGPLAAGATQVVFEGVPTYPNAGRFWDMIQKHRVNTFYTAPTAIRSLIKAAEADETSHPKRYDLSSLRLLGTVGEPI NPEAWMWYHTNIGGGRCPIVDTFWQTETGGHMISPLPGATPLVPGSCTLPLPGIMAAIVDETGQDLPDGQGGILVVKRPW PAMIRTIWGDPERFRKSYFPAELGGKLYLAGDGSVRDKETGYFTIMGRIDDVLNVSGHRMGTMEIESALVANPLVAEAAV VGRPDDMTGEAICAFVVLKRTRPNGDEARQIATDLRNWVGKEIGPIAKPKDIRFGDNLPKTRSGKIMRRLLRSIAKGEDI TQDTSTLENPAILEQLKEAR
Sequences:
>Translated_660_residues MAGIESVLQETRVFEPPASFVKQANIAGMDAYRTLCAEAERDYEGFWARLAHEHLLWHKPFSKVLDESRAPFYTWFEDGE LNASYNCLERNLENGNADKVAVIFEADDGSVARITYRELHARVCRFANGLKALGIRKGDRVVIYMPMSIEGVVAMQACAR IGATHSVVFGGFSAKSLQERIVDVGAVAVITADEQMRGGKALPLKAIADEALAMEGSEAVRHVIVYRRTGAGVNWVEGRD RAMDEVEAGQPDTCEVTPVGAEHPLFILYTSGSTGKPKGVQHSTGGYLLWALLTMQWTFDLKPDDVFWCTADIGWVTGHT YIAYGPLAAGATQVVFEGVPTYPNAGRFWDMIQKHRVNTFYTAPTAIRSLIKAAEADETSHPKRYDLSSLRLLGTVGEPI NPEAWMWYHTNIGGGRCPIVDTFWQTETGGHMISPLPGATPLVPGSCTLPLPGIMAAIVDETGQDLPDGQGGILVVKRPW PAMIRTIWGDPERFRKSYFPAELGGKLYLAGDGSVRDKETGYFTIMGRIDDVLNVSGHRMGTMEIESALVANPLVAEAAV VGRPDDMTGEAICAFVVLKRTRPNGDEARQIATDLRNWVGKEIGPIAKPKDIRFGDNLPKTRSGKIMRRLLRSIAKGEDI TQDTSTLENPAILEQLKEAR >Mature_659_residues AGIESVLQETRVFEPPASFVKQANIAGMDAYRTLCAEAERDYEGFWARLAHEHLLWHKPFSKVLDESRAPFYTWFEDGEL NASYNCLERNLENGNADKVAVIFEADDGSVARITYRELHARVCRFANGLKALGIRKGDRVVIYMPMSIEGVVAMQACARI GATHSVVFGGFSAKSLQERIVDVGAVAVITADEQMRGGKALPLKAIADEALAMEGSEAVRHVIVYRRTGAGVNWVEGRDR AMDEVEAGQPDTCEVTPVGAEHPLFILYTSGSTGKPKGVQHSTGGYLLWALLTMQWTFDLKPDDVFWCTADIGWVTGHTY IAYGPLAAGATQVVFEGVPTYPNAGRFWDMIQKHRVNTFYTAPTAIRSLIKAAEADETSHPKRYDLSSLRLLGTVGEPIN PEAWMWYHTNIGGGRCPIVDTFWQTETGGHMISPLPGATPLVPGSCTLPLPGIMAAIVDETGQDLPDGQGGILVVKRPWP AMIRTIWGDPERFRKSYFPAELGGKLYLAGDGSVRDKETGYFTIMGRIDDVLNVSGHRMGTMEIESALVANPLVAEAAVV GRPDDMTGEAICAFVVLKRTRPNGDEARQIATDLRNWVGKEIGPIAKPKDIRFGDNLPKTRSGKIMRRLLRSIAKGEDIT QDTSTLENPAILEQLKEAR
Specific function: Enables The Cell To Use Acetate During Aerobic Growth To Generate Energy Via The Tca Cycle, And Biosynthetic Compounds Via The Glyoxylate Shunt. Acetylates Chey, The Response Regulator Involved In Flagellar Movement And Chemotaxis. [C]
COG id: COG0365
COG function: function code I; Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ATP-dependent AMP-binding enzyme family [H]
Homologues:
Organism=Homo sapiens, GI8923896, Length=681, Percent_Identity=46.5491923641703, Blast_Score=580, Evalue=1e-165, Organism=Homo sapiens, GI253970489, Length=694, Percent_Identity=45.6772334293948, Blast_Score=575, Evalue=1e-164, Organism=Homo sapiens, GI28416953, Length=635, Percent_Identity=46.4566929133858, Blast_Score=542, Evalue=1e-154, Organism=Homo sapiens, GI13375727, Length=635, Percent_Identity=37.6377952755906, Blast_Score=397, Evalue=1e-110, Organism=Homo sapiens, GI122937307, Length=529, Percent_Identity=29.4896030245747, Blast_Score=187, Evalue=2e-47, Organism=Homo sapiens, GI42544132, Length=530, Percent_Identity=29.622641509434, Blast_Score=187, Evalue=3e-47, Organism=Homo sapiens, GI38505220, Length=535, Percent_Identity=30.4672897196262, Blast_Score=179, Evalue=5e-45, Organism=Homo sapiens, GI31982927, Length=652, Percent_Identity=24.5398773006135, Blast_Score=166, Evalue=6e-41, Organism=Homo sapiens, GI115511026, Length=536, Percent_Identity=27.7985074626866, Blast_Score=164, Evalue=4e-40, Organism=Homo sapiens, GI58082049, Length=522, Percent_Identity=27.9693486590038, Blast_Score=160, Evalue=3e-39, Organism=Homo sapiens, GI157311624, Length=536, Percent_Identity=26.1194029850746, Blast_Score=149, Evalue=8e-36, Organism=Homo sapiens, GI157311622, Length=536, Percent_Identity=26.1194029850746, Blast_Score=149, Evalue=8e-36, Organism=Homo sapiens, GI187761345, Length=574, Percent_Identity=25.0871080139373, Blast_Score=99, Evalue=1e-20, Organism=Homo sapiens, GI187761343, Length=574, Percent_Identity=25.0871080139373, Blast_Score=99, Evalue=1e-20, Organism=Homo sapiens, GI195947378, Length=455, Percent_Identity=25.7142857142857, Blast_Score=92, Evalue=2e-18, Organism=Homo sapiens, GI42544134, Length=322, Percent_Identity=26.0869565217391, Blast_Score=89, Evalue=2e-17, Organism=Escherichia coli, GI1790505, Length=635, Percent_Identity=52.1259842519685, Blast_Score=638, Evalue=0.0, Organism=Escherichia coli, GI1786529, Length=626, Percent_Identity=39.1373801916933, Blast_Score=407, Evalue=1e-114, Organism=Escherichia coli, GI1788107, Length=611, Percent_Identity=26.3502454991817, Blast_Score=120, Evalue=3e-28, Organism=Escherichia coli, GI221142682, Length=542, Percent_Identity=25.4612546125461, Blast_Score=120, Evalue=3e-28, Organism=Escherichia coli, GI1786810, Length=544, Percent_Identity=23.7132352941176, Blast_Score=96, Evalue=6e-21, Organism=Escherichia coli, GI145693145, Length=371, Percent_Identity=26.6846361185984, Blast_Score=89, Evalue=8e-19, Organism=Caenorhabditis elegans, GI71983001, Length=677, Percent_Identity=43.7223042836041, Blast_Score=507, Evalue=1e-144, Organism=Caenorhabditis elegans, GI71982997, Length=676, Percent_Identity=43.7869822485207, Blast_Score=506, Evalue=1e-143, Organism=Caenorhabditis elegans, GI17569507, Length=651, Percent_Identity=24.4239631336406, Blast_Score=148, Evalue=9e-36, Organism=Caenorhabditis elegans, GI71985884, Length=604, Percent_Identity=25, Blast_Score=100, Evalue=2e-21, Organism=Caenorhabditis elegans, GI17560308, Length=569, Percent_Identity=25.6590509666081, Blast_Score=92, Evalue=7e-19, Organism=Caenorhabditis elegans, GI17559526, Length=571, Percent_Identity=24.3432574430823, Blast_Score=89, Evalue=6e-18, Organism=Caenorhabditis elegans, GI17538037, Length=141, Percent_Identity=30.4964539007092, Blast_Score=66, Evalue=7e-11, Organism=Saccharomyces cerevisiae, GI6319264, Length=664, Percent_Identity=47.5903614457831, Blast_Score=573, Evalue=1e-164, Organism=Saccharomyces cerevisiae, GI6323182, Length=670, Percent_Identity=45.0746268656716, Blast_Score=553, Evalue=1e-158, Organism=Saccharomyces cerevisiae, GI6319699, Length=549, Percent_Identity=22.4043715846995, Blast_Score=110, Evalue=5e-25, Organism=Drosophila melanogaster, GI24667955, Length=675, Percent_Identity=46.5185185185185, Blast_Score=576, Evalue=1e-164, Organism=Drosophila melanogaster, GI62472339, Length=562, Percent_Identity=50.5338078291815, Blast_Score=536, Evalue=1e-152, Organism=Drosophila melanogaster, GI24667959, Length=531, Percent_Identity=49.3408662900188, Blast_Score=493, Evalue=1e-139, Organism=Drosophila melanogaster, GI21355225, Length=649, Percent_Identity=33.4360554699538, Blast_Score=352, Evalue=3e-97, Organism=Drosophila melanogaster, GI21355181, Length=528, Percent_Identity=26.3257575757576, Blast_Score=102, Evalue=6e-22, Organism=Drosophila melanogaster, GI24656500, Length=373, Percent_Identity=27.0777479892761, Blast_Score=87, Evalue=5e-17, Organism=Drosophila melanogaster, GI24581924, Length=572, Percent_Identity=23.4265734265734, Blast_Score=76, Evalue=9e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011904 - InterPro: IPR020845 - InterPro: IPR000873 [H]
Pfam domain/function: PF00501 AMP-binding [H]
EC number: =6.2.1.1 [H]
Molecular weight: Translated: 72439; Mature: 72308
Theoretical pI: Translated: 5.93; Mature: 5.93
Prosite motif: PS00455 AMP_BINDING
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGIESVLQETRVFEPPASFVKQANIAGMDAYRTLCAEAERDYEGFWARLAHEHLLWHKP CCCHHHHHHHHHCCCCCHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCC FSKVLDESRAPFYTWFEDGELNASYNCLERNLENGNADKVAVIFEADDGSVARITYRELH HHHHHHCCCCCEEEEEECCCCCCCHHHHHHHCCCCCCCEEEEEEECCCCCEEEEEHHHHH ARVCRFANGLKALGIRKGDRVVIYMPMSIEGVVAMQACARIGATHSVVFGGFSAKSLQER HHHHHHHCCHHEECCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCEEEECCCCHHHHHHH IVDVGAVAVITADEQMRGGKALPLKAIADEALAMEGSEAVRHVIVYRRTGAGVNWVEGRD HHHCCEEEEEECCHHHCCCCCCCHHHHHHHHHHCCCHHHHEEEEEEEECCCCCCCCCCCH RAMDEVEAGQPDTCEVTPVGAEHPLFILYTSGSTGKPKGVQHSTGGYLLWALLTMQWTFD HHHHHHHCCCCCCEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHEEEE LKPDDVFWCTADIGWVTGHTYIAYGPLAAGATQVVFEGVPTYPNAGRFWDMIQKHRVNTF CCCCCEEEEECCCCEEECCCEEEECCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHCCCEE YTAPTAIRSLIKAAEADETSHPKRYDLSSLRLLGTVGEPINPEAWMWYHTNIGGGRCPIV EECHHHHHHHHHHHCCCCCCCCCCCCHHHHHEEECCCCCCCCCEEEEEEECCCCCCCCEE DTFWQTETGGHMISPLPGATPLVPGSCTLPLPGIMAAIVDETGQDLPDGQGGILVVKRPW ECCCCCCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCEEEEECCC PAMIRTIWGDPERFRKSYFPAELGGKLYLAGDGSVRDKETGYFTIMGRIDDVLNVSGHRM HHHHHHHCCCHHHHHHHCCCHHHCCEEEEECCCCCCCCCCCEEEEEECHHHHHCCCCCEE GTMEIESALVANPLVAEAAVVGRPDDMTGEAICAFVVLKRTRPNGDEARQIATDLRNWVG EHHHHHHHHHCCCHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH KEIGPIAKPKDIRFGDNLPKTRSGKIMRRLLRSIAKGEDITQDTSTLENPAILEQLKEAR HHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHCCCHHHHHHHHHCC >Mature Secondary Structure AGIESVLQETRVFEPPASFVKQANIAGMDAYRTLCAEAERDYEGFWARLAHEHLLWHKP CCHHHHHHHHHCCCCCHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCC FSKVLDESRAPFYTWFEDGELNASYNCLERNLENGNADKVAVIFEADDGSVARITYRELH HHHHHHCCCCCEEEEEECCCCCCCHHHHHHHCCCCCCCEEEEEEECCCCCEEEEEHHHHH ARVCRFANGLKALGIRKGDRVVIYMPMSIEGVVAMQACARIGATHSVVFGGFSAKSLQER HHHHHHHCCHHEECCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCEEEECCCCHHHHHHH IVDVGAVAVITADEQMRGGKALPLKAIADEALAMEGSEAVRHVIVYRRTGAGVNWVEGRD HHHCCEEEEEECCHHHCCCCCCCHHHHHHHHHHCCCHHHHEEEEEEEECCCCCCCCCCCH RAMDEVEAGQPDTCEVTPVGAEHPLFILYTSGSTGKPKGVQHSTGGYLLWALLTMQWTFD HHHHHHHCCCCCCEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHEEEE LKPDDVFWCTADIGWVTGHTYIAYGPLAAGATQVVFEGVPTYPNAGRFWDMIQKHRVNTF CCCCCEEEEECCCCEEECCCEEEECCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHCCCEE YTAPTAIRSLIKAAEADETSHPKRYDLSSLRLLGTVGEPINPEAWMWYHTNIGGGRCPIV EECHHHHHHHHHHHCCCCCCCCCCCCHHHHHEEECCCCCCCCCEEEEEEECCCCCCCCEE DTFWQTETGGHMISPLPGATPLVPGSCTLPLPGIMAAIVDETGQDLPDGQGGILVVKRPW ECCCCCCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCEEEEECCC PAMIRTIWGDPERFRKSYFPAELGGKLYLAGDGSVRDKETGYFTIMGRIDDVLNVSGHRM HHHHHHHCCCHHHHHHHCCCHHHCCEEEEECCCCCCCCCCCEEEEEECHHHHHCCCCCEE GTMEIESALVANPLVAEAAVVGRPDDMTGEAICAFVVLKRTRPNGDEARQIATDLRNWVG EHHHHHHHHHCCCHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH KEIGPIAKPKDIRFGDNLPKTRSGKIMRRLLRSIAKGEDITQDTSTLENPAILEQLKEAR HHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA