Click here to switch to the map view.

The map label for this gene is 17546656

Identifier: 17546656

GI number: 17546656

Start: 2110660

End: 2111676

Strand: Reverse

Name: 17546656

Synonym: RSc1937

Alternate gene names: NA

Gene position: 2111676-2110660 (Counterclockwise)

Preceding gene: 17546657

Following gene: 17546655

Centisome position: 56.82

GC content: 63.72

Gene sequence:

>1017_bases
ATGCGCAACGAAACCCGCCGCCTCTTCACGGCTTACAAGGACGCAATCGCCAAGCTCAACGGCGTGGCTCGCGTTGATGA
GAAGTTCAGCGTCGCGCCGAGCGTCCAGCAGAAGCTGGAGACCAAGGTTCAGGAGTCGAGCGATTTCCTGACCCGCATCA
ACTTCTATGGCGTGCCCGAACAGGAAGCCGAAAAGATCGGCCTGGGCGTGTCGGGCCCGGTGGCAAGCAACACCGACACC
ACCCAGCAGGACCGGCAGACCTCCGACATTGCCACGCTGGACGGCCGCCGCTACCGGTGCGAGCAGACCAACTCCGACAC
GCACATCACCTACCAGAGGCTGGACGCCTGGGCCAAGTTCCCCGACTTCCAGACCCGGATCCGCGACGCCATCATCAAGC
GCCAGGCGCTGGATCGCATCATGATCGGCTTCAACGGTGTCAGCCGAGCCGCCACGTCCAATCGGGTGGTCAACCCGATG
CTCCAGGACGTGAACAAAGGCTGGCTGCAGAACCTGCGCGAACAGGCGCCGCAGCGCGTCATGGAGGAAGGCAAAAAAGC
GGCCGGCAAGATCATCGTCGGCGCGGGTGGGGACTACGGCAACCTGGACGCCCTGGTGTTCGACGTCGTGAACCAGCTGG
TCGAGCCGTGGTACGCCGAGGATCCGGAGCTGGTCGTGCTGTGTGGTCGCAACCTGCTGGCCGACAAGTACTTCCCGCTG
GTGAACAAAGACCGCGACCCGGTCCAGCAGATCGCGGCCGACCTCATCATCAGCCAGAAGCGCATCGGCAACCTGCAGGC
GGTGCGCGTGCCGTACTTCCCGGCGAATGGCCTGCTGGTGACGCGCCTGGACAACCTGTCCATCTACTACCAGGAGAACG
CGCGCCGTCGCACGATCCTGGACAACGCGAAGCGCGATCGCATCGAGAACTACGAGTCGAGCAACGACGCGTACGTGATC
GAAGACCTGGCGTGCGCAGCCATGGCCGAGAACATCGAACTGGCGGCGGCAGCATGA

Upstream 100 bases:

>100_bases
CGCCGGCCACGGGCGGCGCCGGCGCACCCATCACGACCGATTGCTGACCCGGCCACCGGCCCGCAGCACACCAACCAGAC
CACACACCGGAGTCAACACA

Downstream 100 bases:

>100_bases
CCAGCCCGGCCCGCAACCACTTCCTGCGCGTGACGGCCGCCTCGGCGGCCAAGGCCGCGCAGGCTTCCAACCCGCTGCGC
TATGCCACCGGCCAGGAGCT

Product: bacteriophage protein

Products: NA

Alternate protein names: Capsid Protein; Phage Capsid Protein P2 Family; Capsid Proteins; Phage Capsid Protein; Phage Capsid Protein; Capsid; Phage Gene; Bacteriophage Capsid Protein; Gp2 Phage Capsid Protein P2 Family Protein; Phage-Related Capsid Protein; Prophage; Phage P2 Capsid GpN-Like Protein; Minor Capsid / Capsid Protein N*; Phage Capsid-Like Protein; Prophage Capsid Protein; Phage-Related Capsid Protein; Bacteriophage Protein; Phage-Related Capsid Completion Protein; Phage Protein; Bacteriophage Capsid Protein N; Capsid-Like Protein; Capsid Protein Phage Origin; Phage Capsid Protein N; Phage Capsid Family

Number of amino acids: Translated: 338; Mature: 338

Protein sequence:

>338_residues
MRNETRRLFTAYKDAIAKLNGVARVDEKFSVAPSVQQKLETKVQESSDFLTRINFYGVPEQEAEKIGLGVSGPVASNTDT
TQQDRQTSDIATLDGRRYRCEQTNSDTHITYQRLDAWAKFPDFQTRIRDAIIKRQALDRIMIGFNGVSRAATSNRVVNPM
LQDVNKGWLQNLREQAPQRVMEEGKKAAGKIIVGAGGDYGNLDALVFDVVNQLVEPWYAEDPELVVLCGRNLLADKYFPL
VNKDRDPVQQIAADLIISQKRIGNLQAVRVPYFPANGLLVTRLDNLSIYYQENARRRTILDNAKRDRIENYESSNDAYVI
EDLACAAMAENIELAAAA

Sequences:

>Translated_338_residues
MRNETRRLFTAYKDAIAKLNGVARVDEKFSVAPSVQQKLETKVQESSDFLTRINFYGVPEQEAEKIGLGVSGPVASNTDT
TQQDRQTSDIATLDGRRYRCEQTNSDTHITYQRLDAWAKFPDFQTRIRDAIIKRQALDRIMIGFNGVSRAATSNRVVNPM
LQDVNKGWLQNLREQAPQRVMEEGKKAAGKIIVGAGGDYGNLDALVFDVVNQLVEPWYAEDPELVVLCGRNLLADKYFPL
VNKDRDPVQQIAADLIISQKRIGNLQAVRVPYFPANGLLVTRLDNLSIYYQENARRRTILDNAKRDRIENYESSNDAYVI
EDLACAAMAENIELAAAA
>Mature_338_residues
MRNETRRLFTAYKDAIAKLNGVARVDEKFSVAPSVQQKLETKVQESSDFLTRINFYGVPEQEAEKIGLGVSGPVASNTDT
TQQDRQTSDIATLDGRRYRCEQTNSDTHITYQRLDAWAKFPDFQTRIRDAIIKRQALDRIMIGFNGVSRAATSNRVVNPM
LQDVNKGWLQNLREQAPQRVMEEGKKAAGKIIVGAGGDYGNLDALVFDVVNQLVEPWYAEDPELVVLCGRNLLADKYFPL
VNKDRDPVQQIAADLIISQKRIGNLQAVRVPYFPANGLLVTRLDNLSIYYQENARRRTILDNAKRDRIENYESSNDAYVI
EDLACAAMAENIELAAAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38019; Mature: 38019

Theoretical pI: Translated: 5.60; Mature: 5.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNETRRLFTAYKDAIAKLNGVARVDEKFSVAPSVQQKLETKVQESSDFLTRINFYGVPE
CCCHHHHHHHHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHEECCCCH
QEAEKIGLGVSGPVASNTDTTQQDRQTSDIATLDGRRYRCEQTNSDTHITYQRLDAWAKF
HHHHHHCCCCCCCCCCCCCCCHHHHHHCCCEECCCCEEECCCCCCCCEEHHHHHHHHHCC
PDFQTRIRDAIIKRQALDRIMIGFNGVSRAATSNRVVNPMLQDVNKGWLQNLREQAPQRV
CCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
MEEGKKAAGKIIVGAGGDYGNLDALVFDVVNQLVEPWYAEDPELVVLCGRNLLADKYFPL
HHHHHHHHCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCHHHHHHCCCC
VNKDRDPVQQIAADLIISQKRIGNLQAVRVPYFPANGLLVTRLDNLSIYYQENARRRTIL
CCCCCCHHHHHHHHHHHHHHHCCCEEEEEECEECCCCEEEEEECCEEEEEECCCCHHHHH
DNAKRDRIENYESSNDAYVIEDLACAAMAENIELAAAA
HHHHHHHHHCCCCCCCCEEHHHHHHHHHHHCCEEEECC
>Mature Secondary Structure
MRNETRRLFTAYKDAIAKLNGVARVDEKFSVAPSVQQKLETKVQESSDFLTRINFYGVPE
CCCHHHHHHHHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHEECCCCH
QEAEKIGLGVSGPVASNTDTTQQDRQTSDIATLDGRRYRCEQTNSDTHITYQRLDAWAKF
HHHHHHCCCCCCCCCCCCCCCHHHHHHCCCEECCCCEEECCCCCCCCEEHHHHHHHHHCC
PDFQTRIRDAIIKRQALDRIMIGFNGVSRAATSNRVVNPMLQDVNKGWLQNLREQAPQRV
CCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
MEEGKKAAGKIIVGAGGDYGNLDALVFDVVNQLVEPWYAEDPELVVLCGRNLLADKYFPL
HHHHHHHHCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCHHHHHHCCCC
VNKDRDPVQQIAADLIISQKRIGNLQAVRVPYFPANGLLVTRLDNLSIYYQENARRRTIL
CCCCCCHHHHHHHHHHHHHHHCCCEEEEEECEECCCCEEEEEECCEEEEEECCCCHHHHH
DNAKRDRIENYESSNDAYVIEDLACAAMAENIELAAAA
HHHHHHHHHCCCCCCCCEEHHHHHHHHHHHCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA