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The map label for this gene is 17546657

Identifier: 17546657

GI number: 17546657

Start: 2111730

End: 2112569

Strand: Reverse

Name: 17546657

Synonym: RSc1938

Alternate gene names: NA

Gene position: 2112569-2111730 (Counterclockwise)

Preceding gene: 17546661

Following gene: 17546656

Centisome position: 56.84

GC content: 65.36

Gene sequence:

>840_bases
ATGGCCAAGGGCACCAAGTTCTACCGCGTCGCCACCGAAGGCGCAACGAGCGACGGTCGCGTGATCGACCGCGAAACGCT
GGTCGAGATTGCAACCAACTATGACCCCAAGGTCTACACCGCGCGCGTCAACCTGGAGCACATCCGAGGCTACGACCCGA
CCGGCCCGTTCAAGGCCTACGGCGACGTGACCGCACTGAAGACCGAGGAGGAGGGCGGCAAGCTCGGCCTGTATGCGCAG
ATCGACCCCACGGACGATCTGGTTGCCATGACCAAGGCTCGCCAGAAAATCTTTGCCTCTATGGAGTTGAACCCGAGCTT
CGCCGACACCGGCGAGGCCTACCTGGTCGGCCTCGCCGTGACCGACAACCCGGCAAGCCTGGGATGCGAAGTCCTGCAGT
TCAGTGCCAAGGCCAAGACCAACCCGCTCGCCGCACGCAAGCAGAACCCGGACAACCTGTTCACCGAAGCCGTGGAGGTG
TCGTTCGACTTCTCGCCCGAGGTGACGAACTACACGGCAACGACCGTGCCCACGAACTTCGCCGACAGCATCAAGCGCCT
GTTCTCCAAGCAGCGCCGGTCGGACACCAACGCGGACGCCCGCTTCGCCGACATGCAGGAGGCCGTGCAGACGGTCGCCC
AGCAGGTGCAGGCCACCGGCGAACAGTTCAGTACCGCGCTCAAGGCCGTCACCGACCAGCTGAGCGCCATGAACAGCCAA
GGCGCGGAGCGCGACAAGCAGTTCAACGCCATGAAGGCCCAGCTGGAGAAGACCGACGCCTACGCCGCCCGCCCGCCGGC
CACGGGCGGCGCCGGCGCACCCATCACGACCGATTGCTGA

Upstream 100 bases:

>100_bases
CCTGTTGTGGCGCGCGATCCCACAACATCAACGCGTTGTCCGCGCGACGCCGCACGCAGAAGATGGCAACACCACCGAAC
TACTGACCACAGAGGACACC

Downstream 100 bases:

>100_bases
CCCGGCCACCGGCCCGCAGCACACCAACCAGACCACACACCGGAGTCAACACAATGCGCAACGAAACCCGCCGCCTCTTC
ACGGCTTACAAGGACGCAAT

Product: bacteriophage protein

Products: NA

Alternate protein names: Capsid Scaffolding; Capsid Scaffolding Protein; Phage Capsid Scaffolding; Capsid Scaffolding Protein O; Phage Capsid Scaffolding Protein GpO; Phage-Related Capsid Scaffolding Protein; V Protein Bacteriophage; Scaffold Protein; Presumed Capsid-Scaffolding Protein; Capsid Scaffolding Protein Bacteriophage Origin; Bacteriophage Protein; Bacteriophage P2 GPO Capsid Protein; Scaffold; Capsid Protein; Presumed Capsid Scaffolding Protein; Capsid Scafolding Protein; Phage-Related Capsid Scaffold Protein; Phage-Related Capsid Scaffold Bacteriophage Protein; Phage P2 Capsid Scaffolding GpO-Like Protein; Prophage Capsid Scaffolding Protein; Flagellar Biosynthesis/Type III Secretory Pathway Protein

Number of amino acids: Translated: 279; Mature: 278

Protein sequence:

>279_residues
MAKGTKFYRVATEGATSDGRVIDRETLVEIATNYDPKVYTARVNLEHIRGYDPTGPFKAYGDVTALKTEEEGGKLGLYAQ
IDPTDDLVAMTKARQKIFASMELNPSFADTGEAYLVGLAVTDNPASLGCEVLQFSAKAKTNPLAARKQNPDNLFTEAVEV
SFDFSPEVTNYTATTVPTNFADSIKRLFSKQRRSDTNADARFADMQEAVQTVAQQVQATGEQFSTALKAVTDQLSAMNSQ
GAERDKQFNAMKAQLEKTDAYAARPPATGGAGAPITTDC

Sequences:

>Translated_279_residues
MAKGTKFYRVATEGATSDGRVIDRETLVEIATNYDPKVYTARVNLEHIRGYDPTGPFKAYGDVTALKTEEEGGKLGLYAQ
IDPTDDLVAMTKARQKIFASMELNPSFADTGEAYLVGLAVTDNPASLGCEVLQFSAKAKTNPLAARKQNPDNLFTEAVEV
SFDFSPEVTNYTATTVPTNFADSIKRLFSKQRRSDTNADARFADMQEAVQTVAQQVQATGEQFSTALKAVTDQLSAMNSQ
GAERDKQFNAMKAQLEKTDAYAARPPATGGAGAPITTDC
>Mature_278_residues
AKGTKFYRVATEGATSDGRVIDRETLVEIATNYDPKVYTARVNLEHIRGYDPTGPFKAYGDVTALKTEEEGGKLGLYAQI
DPTDDLVAMTKARQKIFASMELNPSFADTGEAYLVGLAVTDNPASLGCEVLQFSAKAKTNPLAARKQNPDNLFTEAVEVS
FDFSPEVTNYTATTVPTNFADSIKRLFSKQRRSDTNADARFADMQEAVQTVAQQVQATGEQFSTALKAVTDQLSAMNSQG
AERDKQFNAMKAQLEKTDAYAARPPATGGAGAPITTDC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30168; Mature: 30037

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKGTKFYRVATEGATSDGRVIDRETLVEIATNYDPKVYTARVNLEHIRGYDPTGPFKAY
CCCCCEEEEEEECCCCCCCCEECHHHHHHHHCCCCCEEEEEEEEHHHHCCCCCCCCCCCC
GDVTALKTEEEGGKLGLYAQIDPTDDLVAMTKARQKIFASMELNPSFADTGEAYLVGLAV
CCEEEEEECCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEE
TDNPASLGCEVLQFSAKAKTNPLAARKQNPDNLFTEAVEVSFDFSPEVTNYTATTVPTNF
ECCCHHHHHHHHHHHCCCCCCCCHHCCCCCHHHHHHHHEEEECCCCCCCCEEEECCCCHH
ADSIKRLFSKQRRSDTNADARFADMQEAVQTVAQQVQATGEQFSTALKAVTDQLSAMNSQ
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GAERDKQFNAMKAQLEKTDAYAARPPATGGAGAPITTDC
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AKGTKFYRVATEGATSDGRVIDRETLVEIATNYDPKVYTARVNLEHIRGYDPTGPFKAY
CCCCEEEEEEECCCCCCCCEECHHHHHHHHCCCCCEEEEEEEEHHHHCCCCCCCCCCCC
GDVTALKTEEEGGKLGLYAQIDPTDDLVAMTKARQKIFASMELNPSFADTGEAYLVGLAV
CCEEEEEECCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEE
TDNPASLGCEVLQFSAKAKTNPLAARKQNPDNLFTEAVEVSFDFSPEVTNYTATTVPTNF
ECCCHHHHHHHHHHHCCCCCCCCHHCCCCCHHHHHHHHEEEECCCCCCCCEEEECCCCHH
ADSIKRLFSKQRRSDTNADARFADMQEAVQTVAQQVQATGEQFSTALKAVTDQLSAMNSQ
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GAERDKQFNAMKAQLEKTDAYAARPPATGGAGAPITTDC
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA