| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is 17546600
Identifier: 17546600
GI number: 17546600
Start: 2064443
End: 2065957
Strand: Direct
Name: 17546600
Synonym: RSc1881
Alternate gene names: NA
Gene position: 2064443-2065957 (Clockwise)
Preceding gene: 17546599
Following gene: 17546601
Centisome position: 55.55
GC content: 73.2
Gene sequence:
>1515_bases ATGACCGCGGGCCCGCAAGCACACGGCCACGCGCCGCAGACCGCCGGACTGGCGGCGCTGGAAGCCCGCCTGCGCCAGGA TCTCGCCTGGCTCGAACTGCCCGCCAAACCCTGGACACTGCCGCACGCGCTGGACGGGCAGCCCGTGCTGGACGTCGCCA TCATCGGCGGGGGCATGGCGGGCCTGGCCGCGGCGACGGCGCTCAAGCATCTCGGCATCGGCGCGGTGGTGTTCGACCGC GCGCCCGAAGGCTACGAAGGCCCGTGGGCGACCACCGCCCGCATGGAAACGCTGCGCTCGCCCAAGCAGCTGACCGGCCC CGCGCTGGGCCTGCCCGCGCTGACGTTCCGGGCCTGGTTCGAGGCGCAATTCGGCGCCGATGCATGGGAGACGCTCGACA AGATCCCACGCCTGCAATGGATGGACTACCTGCGCTGGTACCGCCGCGTGCTGCAGCTGGAGGTCCGCAACGCGCATCAC GTCAGGACCGTGCAGCCGCGCGCCGACGGTGCGGTCGAGCTGACCCTCGACACACCGGACGCAGCCGGGCAGCGCGTGCT GGCGCGCCGCGTGGTGCTGGCCACCGGCCGTGACGGCCTGGGCGGCCCGGCCGTGCCGGCGTTCGCGCACCGCCTGCCGC ACCGCTGGTGGGCGCATTCGTCCGATGCGATGGACTACGGCGCGCTGGCGGGCAAACGGGTGGGCGTGATCGGCGCGGGC GCGTCGGCCATGGATTCGGCCGCCACCGCGCTGGAAGCCGGCGCCGCGAGCGTCGATCTGCTGATCCGCCGCCCCGACCT GCCCCGCATCAACAAGGGCAAGGGCGCGGGCAGCCCGGGGCTGGTCCATGGCCACCAGCATCTGCCGGACGCCTGGAAAT GGCGCATCCGCCATTACATCAATGCCGAGCAGGTGCCGCCGCCGCGCGGCAGCACGCTGCGCGTGTCGCGGCACCCGAAC GCGCGCTTCAACCTCGGCTGCCCCGTGCTGGGCGTGGACGAGCACAACGGTGCCCTGCACGTGACGACGCCCAAGGGCGT GTTTCGCCTCGACTTCCTGATCTTTTCGACGGGCTTTCGCCTCGATTGGGCGGCGCGCCCCGAGTTCAGCGCGCTCGCGC CGCACGTGCGCCTCTGGCGCGATCGCTACACGCCCCGCCCCGGCGAGGAAGACGCGGAACTGAGCGACTCGCCCGACCTC GGCCCCGCCTTCGAATTGCGCGAGAAGACGCCCGGCCAGCTGCCGGGACTGTCGCGCGTGCATTGCTTCTGCTACCCGGC GTCGCTCACGCACGGCAGCGTCTCGGGCGACATCCCGGCCATCAGCGAAGGCGCGCGCCGGCTGGCGCAGGGCATCGCCG GGCTGCTGTACCAGGAAGACATCGAAGGCCACTACGCCGCGATGCAGGCCTACGCCGAGCCGGAGATCTTCGGCGACGAG TGGACGCCCGCGCCGCCGCCGCAGTCCGAGCCGGCCGCCGCGGCCGCCTCCCCTGCCCGCGAGGCCGCGCGATGA
Upstream 100 bases:
>100_bases GCCTGCTGCCCGATTGCAAGCTGCATGACCCGGCCCGCCACGCCAGCATGCTGCAGGTGCTGTACGGCGAACCGCTCAAC GAAACCGAAGGCGCGTCCGC
Downstream 100 bases:
>100_bases CGGGCTGGCTGATCCGCCGTATCGGCCAGGCGCTGCTGGTGGTGCTGGTGATGACGGTGATCGTCTTCGTCGGCCTGCAC GCCATCGGCAACCCGGTCGA
Product: transmembrane oxidoreductase
Products: NA
Alternate protein names: FAD Dependent Oxidoreductase; Oxidoreductase Protein; Monooxygenase; FAD-Dependent Oxidoreductase; FAD-Dependent Pyridine Nucleotide-Disulphide Oxidoreductase; Transmembrane Oxidoreductase Protein; Monoxygenase; Truncated Monoxygenase; Oxidoreductase/Monooxygenase; Transmembrane Oxidoreductase; Fad-Dependent Pyridine Nucleotide-Disulfide Oxidoreductase; Flavoprotein Involved In K+ Transport COG; Fad-Dependent Pyridine Nucleotide-Disulphide Oxidoreductase; Protein AegA
Number of amino acids: Translated: 504; Mature: 503
Protein sequence:
>504_residues MTAGPQAHGHAPQTAGLAALEARLRQDLAWLELPAKPWTLPHALDGQPVLDVAIIGGGMAGLAAATALKHLGIGAVVFDR APEGYEGPWATTARMETLRSPKQLTGPALGLPALTFRAWFEAQFGADAWETLDKIPRLQWMDYLRWYRRVLQLEVRNAHH VRTVQPRADGAVELTLDTPDAAGQRVLARRVVLATGRDGLGGPAVPAFAHRLPHRWWAHSSDAMDYGALAGKRVGVIGAG ASAMDSAATALEAGAASVDLLIRRPDLPRINKGKGAGSPGLVHGHQHLPDAWKWRIRHYINAEQVPPPRGSTLRVSRHPN ARFNLGCPVLGVDEHNGALHVTTPKGVFRLDFLIFSTGFRLDWAARPEFSALAPHVRLWRDRYTPRPGEEDAELSDSPDL GPAFELREKTPGQLPGLSRVHCFCYPASLTHGSVSGDIPAISEGARRLAQGIAGLLYQEDIEGHYAAMQAYAEPEIFGDE WTPAPPPQSEPAAAAASPAREAAR
Sequences:
>Translated_504_residues MTAGPQAHGHAPQTAGLAALEARLRQDLAWLELPAKPWTLPHALDGQPVLDVAIIGGGMAGLAAATALKHLGIGAVVFDR APEGYEGPWATTARMETLRSPKQLTGPALGLPALTFRAWFEAQFGADAWETLDKIPRLQWMDYLRWYRRVLQLEVRNAHH VRTVQPRADGAVELTLDTPDAAGQRVLARRVVLATGRDGLGGPAVPAFAHRLPHRWWAHSSDAMDYGALAGKRVGVIGAG ASAMDSAATALEAGAASVDLLIRRPDLPRINKGKGAGSPGLVHGHQHLPDAWKWRIRHYINAEQVPPPRGSTLRVSRHPN ARFNLGCPVLGVDEHNGALHVTTPKGVFRLDFLIFSTGFRLDWAARPEFSALAPHVRLWRDRYTPRPGEEDAELSDSPDL GPAFELREKTPGQLPGLSRVHCFCYPASLTHGSVSGDIPAISEGARRLAQGIAGLLYQEDIEGHYAAMQAYAEPEIFGDE WTPAPPPQSEPAAAAASPAREAAR >Mature_503_residues TAGPQAHGHAPQTAGLAALEARLRQDLAWLELPAKPWTLPHALDGQPVLDVAIIGGGMAGLAAATALKHLGIGAVVFDRA PEGYEGPWATTARMETLRSPKQLTGPALGLPALTFRAWFEAQFGADAWETLDKIPRLQWMDYLRWYRRVLQLEVRNAHHV RTVQPRADGAVELTLDTPDAAGQRVLARRVVLATGRDGLGGPAVPAFAHRLPHRWWAHSSDAMDYGALAGKRVGVIGAGA SAMDSAATALEAGAASVDLLIRRPDLPRINKGKGAGSPGLVHGHQHLPDAWKWRIRHYINAEQVPPPRGSTLRVSRHPNA RFNLGCPVLGVDEHNGALHVTTPKGVFRLDFLIFSTGFRLDWAARPEFSALAPHVRLWRDRYTPRPGEEDAELSDSPDLG PAFELREKTPGQLPGLSRVHCFCYPASLTHGSVSGDIPAISEGARRLAQGIAGLLYQEDIEGHYAAMQAYAEPEIFGDEW TPAPPPQSEPAAAAASPAREAAR
Specific function: Unknown
COG id: COG2072
COG function: function code P; Predicted flavoprotein involved in K+ transport
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54409; Mature: 54278
Theoretical pI: Translated: 7.61; Mature: 7.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAGPQAHGHAPQTAGLAALEARLRQDLAWLELPAKPWTLPHALDGQPVLDVAIIGGGMA CCCCCCCCCCCCCHHHHHHHHHHHHHCHHHEECCCCCCCCCCCCCCCCEEEEEEECCCHH GLAAATALKHLGIGAVVFDRAPEGYEGPWATTARMETLRSPKQLTGPALGLPALTFRAWF HHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHCCCHHHCCCCCCCHHHHHHHHH EAQFGADAWETLDKIPRLQWMDYLRWYRRVLQLEVRNAHHVRTVQPRADGAVELTLDTPD HHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCEEEEEECCCC AAGQRVLARRVVLATGRDGLGGPAVPAFAHRLPHRWWAHSSDAMDYGALAGKRVGVIGAG HHHHHHHHHHHHEEECCCCCCCCCHHHHHHHCCHHHHCCCCCCCHHHHHCCCCEEEEECC ASAMDSAATALEAGAASVDLLIRRPDLPRINKGKGAGSPGLVHGHQHLPDAWKWRIRHYI CHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCEECCCCCCCHHHHHHHHHHC NAEQVPPPRGSTLRVSRHPNARFNLGCPVLGVDEHNGALHVTTPKGVFRLDFLIFSTGFR CCCCCCCCCCCEEEEECCCCCEEECCCCEEEECCCCCEEEEECCCCCEEEEEEEEECCCE LDWAARPEFSALAPHVRLWRDRYTPRPGEEDAELSDSPDLGPAFELREKTPGQLPGLSRV EEECCCCCHHHHCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCE HCFCYPASLTHGSVSGDIPAISEGARRLAQGIAGLLYQEDIEGHYAAMQAYAEPEIFGDE EEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCC WTPAPPPQSEPAAAAASPAREAAR CCCCCCCCCCCCHHHCCCHHHHCC >Mature Secondary Structure TAGPQAHGHAPQTAGLAALEARLRQDLAWLELPAKPWTLPHALDGQPVLDVAIIGGGMA CCCCCCCCCCCCHHHHHHHHHHHHHCHHHEECCCCCCCCCCCCCCCCEEEEEEECCCHH GLAAATALKHLGIGAVVFDRAPEGYEGPWATTARMETLRSPKQLTGPALGLPALTFRAWF HHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHCCCHHHCCCCCCCHHHHHHHHH EAQFGADAWETLDKIPRLQWMDYLRWYRRVLQLEVRNAHHVRTVQPRADGAVELTLDTPD HHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCEEEEEECCCC AAGQRVLARRVVLATGRDGLGGPAVPAFAHRLPHRWWAHSSDAMDYGALAGKRVGVIGAG HHHHHHHHHHHHEEECCCCCCCCCHHHHHHHCCHHHHCCCCCCCHHHHHCCCCEEEEECC ASAMDSAATALEAGAASVDLLIRRPDLPRINKGKGAGSPGLVHGHQHLPDAWKWRIRHYI CHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCEECCCCCCCHHHHHHHHHHC NAEQVPPPRGSTLRVSRHPNARFNLGCPVLGVDEHNGALHVTTPKGVFRLDFLIFSTGFR CCCCCCCCCCCEEEEECCCCCEEECCCCEEEECCCCCEEEEECCCCCEEEEEEEEECCCE LDWAARPEFSALAPHVRLWRDRYTPRPGEEDAELSDSPDLGPAFELREKTPGQLPGLSRV EEECCCCCHHHHCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCE HCFCYPASLTHGSVSGDIPAISEGARRLAQGIAGLLYQEDIEGHYAAMQAYAEPEIFGDE EEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCC WTPAPPPQSEPAAAAASPAREAAR CCCCCCCCCCCCHHHCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA