Click here to switch to the map view.

The map label for this gene is 17546589

Identifier: 17546589

GI number: 17546589

Start: 2053401

End: 2054642

Strand: Reverse

Name: 17546589

Synonym: RSc1870

Alternate gene names: NA

Gene position: 2054642-2053401 (Counterclockwise)

Preceding gene: 17546590

Following gene: 17546588

Centisome position: 55.29

GC content: 58.94

Gene sequence:

>1242_bases
ATGGGTGCAGACGGTCCCCGTTCGTTTTCCGCCATCGTTGCTGGGCAGCGCGCCGGATTTATCAGCTACGGCGAGGCGAT
GAAAAAGCTCCGCGAATTCACTGGTGACAGGCTTGAAGAGATTGCTTCGGGTCTGAAATCGCACGGTATCCATGAAAAGC
ACATGGCGTATCTTGCCGGGCCGGAGCAGGCCGTAAGGCGAATCACTGGTTCCCATGACTTGACCGCGCTTCTGGACGAA
ACCATCGCCGGCAACGGAATTATTCCGGCATGGATCAGCGTCGACGATCAAGCGAGCCCGGACCGGTGTGGATGGATTCG
GCAGGGGCTTGTGGAGCAGTTACAGGGCGCTAATTTGCCATGCCCGGACACCTTACTTAGCACCGTGCCGTATGCATCAT
CTACGTCTCAGGAGGCCCCGTCGAAGCCAGACTGGGTGCGGCCCCACATTGGGCGCAACCAAATTTCCTTGGGCGACGCA
TCGGCGTTTCTGGCCGATCCAGTATCTGGTTGCTGTGGGGATTGGGATCGTCTCCGCCCTTGGCGTGAGGCACTGATCGA
GGCCGTAGACCATCAGGAAATTGCCGCTGGAAGCTGGAGCTTTGACCGTGATGAGCAACCGCTAAACCACGCCGACATTC
GCGCCTGGTGTGCGCGGCGAGGTCACGATTGGCCGATTCCAGAGTTGAGTTTGCAGCCGGCAATTCGCACCGAAGCATCG
GTCGAGATTTCGGCATTGTCCGAAGCGCAAGACCATGCCGAAAAGCTTCTTGCCGAAAATGTCCGCCTCCAATTCGAGGT
TGCGCGCCTATCTGATCGTCTTGTGGGAAAGGGCCGAGAGGTGGCTCTGTTGGAGCGGACCATTGCCCGCAATGCGGTAA
CGTCAGCCGCTCAGTTGGAGAGCATCGAGGGCCGTCTGTCGGAGGCGACGTGCGAGATCGAGCGCTTGAGGACTGCGCCT
CCTACACAAGATCATGCCGAAGCTGCAGGCGCCGGTGTCACCGTTCATCTACCCCATGTCACAAAGGGCCTGACAGGGCT
TTTCGACGTCATGCGCAAACACTGGACGAACTACAGCAAGGACACGCCGCCGAAATCATCCAACGTCGCAGCAGCCATCG
ATACGGCGCTAGGCTTCAAGAAGCAGAAGAGTGGCGATCCCTCGCGCAATGGGCAGACACTCGCCGCACTGATTCGTCCG
GATGAAGAGCGCGAGGCAGACCAGCGCGTTGCCAAGCGTTAA

Upstream 100 bases:

>100_bases
AACGACAGCTTAAGCCGCGCCTAGATCGGCCAATCGAAAACGGGTTCCCTTACCCGCTGGCGCGGCTCCCTCATAAGGGC
TTGCGTGAAAGGGTGCGCAG

Downstream 100 bases:

>100_bases
AGGCGACGGTACTCCCTGGCGGTATGCCTGCATGGAGTGCGGTTGACGTTGCCAATTCATCGATTCCGTCGGGGGACAGC
GAGGTCTCCTGACGGTACTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 413; Mature: 412

Protein sequence:

>413_residues
MGADGPRSFSAIVAGQRAGFISYGEAMKKLREFTGDRLEEIASGLKSHGIHEKHMAYLAGPEQAVRRITGSHDLTALLDE
TIAGNGIIPAWISVDDQASPDRCGWIRQGLVEQLQGANLPCPDTLLSTVPYASSTSQEAPSKPDWVRPHIGRNQISLGDA
SAFLADPVSGCCGDWDRLRPWREALIEAVDHQEIAAGSWSFDRDEQPLNHADIRAWCARRGHDWPIPELSLQPAIRTEAS
VEISALSEAQDHAEKLLAENVRLQFEVARLSDRLVGKGREVALLERTIARNAVTSAAQLESIEGRLSEATCEIERLRTAP
PTQDHAEAAGAGVTVHLPHVTKGLTGLFDVMRKHWTNYSKDTPPKSSNVAAAIDTALGFKKQKSGDPSRNGQTLAALIRP
DEEREADQRVAKR

Sequences:

>Translated_413_residues
MGADGPRSFSAIVAGQRAGFISYGEAMKKLREFTGDRLEEIASGLKSHGIHEKHMAYLAGPEQAVRRITGSHDLTALLDE
TIAGNGIIPAWISVDDQASPDRCGWIRQGLVEQLQGANLPCPDTLLSTVPYASSTSQEAPSKPDWVRPHIGRNQISLGDA
SAFLADPVSGCCGDWDRLRPWREALIEAVDHQEIAAGSWSFDRDEQPLNHADIRAWCARRGHDWPIPELSLQPAIRTEAS
VEISALSEAQDHAEKLLAENVRLQFEVARLSDRLVGKGREVALLERTIARNAVTSAAQLESIEGRLSEATCEIERLRTAP
PTQDHAEAAGAGVTVHLPHVTKGLTGLFDVMRKHWTNYSKDTPPKSSNVAAAIDTALGFKKQKSGDPSRNGQTLAALIRP
DEEREADQRVAKR
>Mature_412_residues
GADGPRSFSAIVAGQRAGFISYGEAMKKLREFTGDRLEEIASGLKSHGIHEKHMAYLAGPEQAVRRITGSHDLTALLDET
IAGNGIIPAWISVDDQASPDRCGWIRQGLVEQLQGANLPCPDTLLSTVPYASSTSQEAPSKPDWVRPHIGRNQISLGDAS
AFLADPVSGCCGDWDRLRPWREALIEAVDHQEIAAGSWSFDRDEQPLNHADIRAWCARRGHDWPIPELSLQPAIRTEASV
EISALSEAQDHAEKLLAENVRLQFEVARLSDRLVGKGREVALLERTIARNAVTSAAQLESIEGRLSEATCEIERLRTAPP
TQDHAEAAGAGVTVHLPHVTKGLTGLFDVMRKHWTNYSKDTPPKSSNVAAAIDTALGFKKQKSGDPSRNGQTLAALIRPD
EEREADQRVAKR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45050; Mature: 44919

Theoretical pI: Translated: 6.07; Mature: 6.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGADGPRSFSAIVAGQRAGFISYGEAMKKLREFTGDRLEEIASGLKSHGIHEKHMAYLAG
CCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCC
PEQAVRRITGSHDLTALLDETIAGNGIIPAWISVDDQASPDRCGWIRQGLVEQLQGANLP
HHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCC
CPDTLLSTVPYASSTSQEAPSKPDWVRPHIGRNQISLGDASAFLADPVSGCCGDWDRLRP
CCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCHHHHCCCHHHCCH
WREALIEAVDHQEIAAGSWSFDRDEQPLNHADIRAWCARRGHDWPIPELSLQPAIRTEAS
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
VEISALSEAQDHAEKLLAENVRLQFEVARLSDRLVGKGREVALLERTIARNAVTSAAQLE
CHHHHHHHHHHHHHHHHHHCCHHEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
SIEGRLSEATCEIERLRTAPPTQDHAEAAGAGVTVHLPHVTKGLTGLFDVMRKHWTNYSK
HHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHCCCCC
DTPPKSSNVAAAIDTALGFKKQKSGDPSRNGQTLAALIRPDEEREADQRVAKR
CCCCCCCCHHHHHHHHHCCHHHCCCCCCCCCCEEEEEECCCHHHHHHHHHHCC
>Mature Secondary Structure 
GADGPRSFSAIVAGQRAGFISYGEAMKKLREFTGDRLEEIASGLKSHGIHEKHMAYLAG
CCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCC
PEQAVRRITGSHDLTALLDETIAGNGIIPAWISVDDQASPDRCGWIRQGLVEQLQGANLP
HHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCC
CPDTLLSTVPYASSTSQEAPSKPDWVRPHIGRNQISLGDASAFLADPVSGCCGDWDRLRP
CCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCHHHHCCCHHHCCH
WREALIEAVDHQEIAAGSWSFDRDEQPLNHADIRAWCARRGHDWPIPELSLQPAIRTEAS
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
VEISALSEAQDHAEKLLAENVRLQFEVARLSDRLVGKGREVALLERTIARNAVTSAAQLE
CHHHHHHHHHHHHHHHHHHCCHHEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
SIEGRLSEATCEIERLRTAPPTQDHAEAAGAGVTVHLPHVTKGLTGLFDVMRKHWTNYSK
HHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHCCCCC
DTPPKSSNVAAAIDTALGFKKQKSGDPSRNGQTLAALIRPDEEREADQRVAKR
CCCCCCCCHHHHHHHHHCCHHHCCCCCCCCCCEEEEEECCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA