Definition Ralstonia solanacearum GMI1000, complete genome.
Accession NC_003295
Length 3,716,413

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The map label for this gene is 17546582

Identifier: 17546582

GI number: 17546582

Start: 2047369

End: 2047878

Strand: Direct

Name: 17546582

Synonym: RSc1863

Alternate gene names: NA

Gene position: 2047369-2047878 (Clockwise)

Preceding gene: 17546581

Following gene: 17546583

Centisome position: 55.09

GC content: 66.27

Gene sequence:

>510_bases
ATGGCGGCGCCTGACGCAACCGCTCGCGATGCACCGTGCAACATCCTCTGCGACGGCCGCGTGACGGCGGACACCTGGCG
GGCCTATCCCGTGGAGCACGGTAATGGGGACCAGGTGTGTCCCCCCGATGAAGCGGGCTATCGGGTCACCCTGCAGAACT
GGATGACCCATCGGCGGCAGTACCGCCGGCGCCGGCATCCGGTTGCGGTGTGGCTGGCACCGGACGCGGATCCGGCGGGG
TTGCTGGAGCCTGGGGCCACCACCATCGACCCGACCGGCCTGGCGATGATCGCAATCGACTTTCCGGTCTACACGGATGG
CCGCGGCTATTCGATCGCTCAGTTGCTTCGCCATCCACTGGGCTGGCAGGGCGCGCTGCGTGCCGTGGGCGACGTCATGA
TCGATACCGTGCACTACCTGGCCCGCTGCGGCTTTGACAGCTTCGCCCTTAAGCCCACCCCTTTCAAGGTCTTGTCGCAC
AGAAGTGCCGTATTCTTCCGCTCGCCTTGA

Upstream 100 bases:

>100_bases
TTCGTCGACGTGGTCGGCCGGATCGGCATCGAGCCCTTTCAGGCCGCGGTGTACCCGGACGCGGCCATCGCGGCGCGGCG
CTCACACGCAGAGGTAGCGC

Downstream 100 bases:

>100_bases
GGAAACGGGAGAGAGGAAATCTGGCAAGCCGTTGTAGAGCGATTTGAGGAGCATGCGCCGGCGAGCGTGATGGCGCGTCT
GGCGCTGGAGCGGGCGTTGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 169; Mature: 168

Protein sequence:

>169_residues
MAAPDATARDAPCNILCDGRVTADTWRAYPVEHGNGDQVCPPDEAGYRVTLQNWMTHRRQYRRRRHPVAVWLAPDADPAG
LLEPGATTIDPTGLAMIAIDFPVYTDGRGYSIAQLLRHPLGWQGALRAVGDVMIDTVHYLARCGFDSFALKPTPFKVLSH
RSAVFFRSP

Sequences:

>Translated_169_residues
MAAPDATARDAPCNILCDGRVTADTWRAYPVEHGNGDQVCPPDEAGYRVTLQNWMTHRRQYRRRRHPVAVWLAPDADPAG
LLEPGATTIDPTGLAMIAIDFPVYTDGRGYSIAQLLRHPLGWQGALRAVGDVMIDTVHYLARCGFDSFALKPTPFKVLSH
RSAVFFRSP
>Mature_168_residues
AAPDATARDAPCNILCDGRVTADTWRAYPVEHGNGDQVCPPDEAGYRVTLQNWMTHRRQYRRRRHPVAVWLAPDADPAGL
LEPGATTIDPTGLAMIAIDFPVYTDGRGYSIAQLLRHPLGWQGALRAVGDVMIDTVHYLARCGFDSFALKPTPFKVLSHR
SAVFFRSP

Specific function: Unknown

COG id: COG3749

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18700; Mature: 18569

Theoretical pI: Translated: 7.99; Mature: 7.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAPDATARDAPCNILCDGRVTADTWRAYPVEHGNGDQVCPPDEAGYRVTLQNWMTHRRQ
CCCCCCCCCCCCCEEEECCEEECCCEEECCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHH
YRRRRHPVAVWLAPDADPAGLLEPGATTIDPTGLAMIAIDFPVYTDGRGYSIAQLLRHPL
HHHHCCCEEEEECCCCCCCCCCCCCCCEECCCCEEEEEEECCEEECCCCCHHHHHHHCCC
GWQGALRAVGDVMIDTVHYLARCGFDSFALKPTPFKVLSHRSAVFFRSP
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCEEEEECC
>Mature Secondary Structure 
AAPDATARDAPCNILCDGRVTADTWRAYPVEHGNGDQVCPPDEAGYRVTLQNWMTHRRQ
CCCCCCCCCCCCEEEECCEEECCCEEECCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHH
YRRRRHPVAVWLAPDADPAGLLEPGATTIDPTGLAMIAIDFPVYTDGRGYSIAQLLRHPL
HHHHCCCEEEEECCCCCCCCCCCCCCCEECCCCEEEEEEECCEEECCCCCHHHHHHHCCC
GWQGALRAVGDVMIDTVHYLARCGFDSFALKPTPFKVLSHRSAVFFRSP
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA