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The map label for this gene is tISRso10a [C]

Identifier: 17546550

GI number: 17546550

Start: 2002390

End: 2002755

Strand: Reverse

Name: tISRso10a [C]

Synonym: RSc1831

Alternate gene names: 17546550

Gene position: 2002755-2002390 (Counterclockwise)

Preceding gene: 17546552

Following gene: 17546549

Centisome position: 53.89

GC content: 63.11

Gene sequence:

>366_bases
ATGGAAGTGTTGACGGGCCCGGAGCGTCGCCGGCGGTGGTCGGTGGAAGAGAAGCTTGCGATGGTCCGAGAGAGCTTTGA
GCCGGGCAAGACGGTCTCGATGGTGGCGCGCCAGCACGGCGTGAATCCGAATCAGGTGTTCCAGTGGCGCAAGCTGTACC
AAGACGGGAGCCTGTCGGCAGTGACCGCGGGCGAGGAAGTGGTGCCGGCCTCGGAGCTGGCCGAAGCGCTCAAACAAGTC
CGTGAGCTGCAGCGCATGCTCGGCAAGAAGACGATGGAGAACGAGATTCTTCGCGAAGCCGTGGAATACGGTCGGGCAAA
AAAGTGGATAGCGCGCTCGCCATCGTTGCCGGGGGACGACCAGTGA

Upstream 100 bases:

>100_bases
GGGCGCGTGGAACGGCCCCCAGAATCCCCGGACACAGTCACCCACTTAAACTACGGGTAGGCATACGACTGTGTTTATGA
CTAGCAGCAACCAAGAAGTG

Downstream 100 bases:

>100_bases
AGCTAGTTTGCGAGGTCCTCGGCGTAGCGCGCTCAAACGTGGCGGCCAAGCGGGCCCGGCCGGGTGATTGGCGCGACGGG
CGCACAGCTCGGCAAACCGA

Product: ISRSO10-transposase ORFA protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 121; Mature: 121

Protein sequence:

>121_residues
MEVLTGPERRRRWSVEEKLAMVRESFEPGKTVSMVARQHGVNPNQVFQWRKLYQDGSLSAVTAGEEVVPASELAEALKQV
RELQRMLGKKTMENEILREAVEYGRAKKWIARSPSLPGDDQ

Sequences:

>Translated_121_residues
MEVLTGPERRRRWSVEEKLAMVRESFEPGKTVSMVARQHGVNPNQVFQWRKLYQDGSLSAVTAGEEVVPASELAEALKQV
RELQRMLGKKTMENEILREAVEYGRAKKWIARSPSLPGDDQ
>Mature_121_residues
MEVLTGPERRRRWSVEEKLAMVRESFEPGKTVSMVARQHGVNPNQVFQWRKLYQDGSLSAVTAGEEVVPASELAEALKQV
RELQRMLGKKTMENEILREAVEYGRAKKWIARSPSLPGDDQ

Specific function: Involved in the transposition of the insertion sequence is2 [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Escherichia coli, GI145693215, Length=116, Percent_Identity=71.551724137931, Blast_Score=180, Evalue=3e-47,
Organism=Escherichia coli, GI145693180, Length=116, Percent_Identity=71.551724137931, Blast_Score=180, Evalue=3e-47,
Organism=Escherichia coli, GI145693177, Length=116, Percent_Identity=71.551724137931, Blast_Score=180, Evalue=3e-47,
Organism=Escherichia coli, GI145693154, Length=116, Percent_Identity=71.551724137931, Blast_Score=180, Evalue=3e-47,
Organism=Escherichia coli, GI145693126, Length=116, Percent_Identity=71.551724137931, Blast_Score=180, Evalue=3e-47,
Organism=Escherichia coli, GI145693097, Length=116, Percent_Identity=71.551724137931, Blast_Score=180, Evalue=3e-47,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR001584
- InterPro:   IPR012337
- InterPro:   IPR002514 [H]

Pfam domain/function: PF00665 rve; PF01527 Transposase_8 [H]

EC number: NA

Molecular weight: Translated: 13810; Mature: 13810

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEVLTGPERRRRWSVEEKLAMVRESFEPGKTVSMVARQHGVNPNQVFQWRKLYQDGSLSA
CCCCCCCHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCE
VTAGEEVVPASELAEALKQVRELQRMLGKKTMENEILREAVEYGRAKKWIARSPSLPGDD
ECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
Q
C
>Mature Secondary Structure
MEVLTGPERRRRWSVEEKLAMVRESFEPGKTVSMVARQHGVNPNQVFQWRKLYQDGSLSA
CCCCCCCHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCE
VTAGEEVVPASELAEALKQVRELQRMLGKKTMENEILREAVEYGRAKKWIARSPSLPGDD
ECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
Q
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA