Click here to switch to the map view.

The map label for this gene is 17546474

Identifier: 17546474

GI number: 17546474

Start: 1878047

End: 1878379

Strand: Reverse

Name: 17546474

Synonym: RSc1755

Alternate gene names: NA

Gene position: 1878379-1878047 (Counterclockwise)

Preceding gene: 17546476

Following gene: 17546467

Centisome position: 50.54

GC content: 63.66

Gene sequence:

>333_bases
ATGCGGCGCCTCAATTTTCGCGACAACCCGATATCCCATATGGAATGTGCAAGGCATCAAACCGATGCCGATGCCCGTGT
GTATTCCATGAATCGGATTGCAGTCATCGACATTGCGCCGCTCACCGGCAAGGCTCGCGATGCGGCAGGGCTCGACCTGC
CAGGCCCGGCACGAGTGGACGCGCGGCACGACGTGCCGCCGGCGCGCGAGTCAGCCGGACTGGACAGCAGGACGGTACGG
TTGACCGACGAACGCCGCCTCCTGCGGTTTCGTCGCTTGCTGAAAACGCACAGGCCGGCCGTCGTGGAGTGGGAAAGCCA
ACGCCTCCAGTGA

Upstream 100 bases:

>100_bases
AAGGAAATCATAAGATTTTCCTTAAAATGGATTTAGGCAGTCGCAAGGTACCGTCGAATTAATGGCCCCAGCAAGCTCGC
ATGAGGAAATTTGATCATCC

Downstream 100 bases:

>100_bases
TGCGGGCGCCCTGGGGCACGGATCGGCCCCCGAACGCCGTGCCGGGAACTGAGCATGCCCGCGGCAGGGTGCCCGGTTCG
GGCCACGCGCGCGGCAGGTT

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 110; Mature: 110

Protein sequence:

>110_residues
MRRLNFRDNPISHMECARHQTDADARVYSMNRIAVIDIAPLTGKARDAAGLDLPGPARVDARHDVPPARESAGLDSRTVR
LTDERRLLRFRRLLKTHRPAVVEWESQRLQ

Sequences:

>Translated_110_residues
MRRLNFRDNPISHMECARHQTDADARVYSMNRIAVIDIAPLTGKARDAAGLDLPGPARVDARHDVPPARESAGLDSRTVR
LTDERRLLRFRRLLKTHRPAVVEWESQRLQ
>Mature_110_residues
MRRLNFRDNPISHMECARHQTDADARVYSMNRIAVIDIAPLTGKARDAAGLDLPGPARVDARHDVPPARESAGLDSRTVR
LTDERRLLRFRRLLKTHRPAVVEWESQRLQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12619; Mature: 12619

Theoretical pI: Translated: 11.41; Mature: 11.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRLNFRDNPISHMECARHQTDADARVYSMNRIAVIDIAPLTGKARDAAGLDLPGPARVD
CCCCCCCCCCCHHHHHHHCCCCCCCEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCC
ARHDVPPARESAGLDSRTVRLTDERRLLRFRRLLKTHRPAVVEWESQRLQ
CCCCCCCCCHHCCCCCCEEEECHHHHHHHHHHHHHHCCCEEEECCCCCCC
>Mature Secondary Structure
MRRLNFRDNPISHMECARHQTDADARVYSMNRIAVIDIAPLTGKARDAAGLDLPGPARVD
CCCCCCCCCCCHHHHHHHCCCCCCCEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCC
ARHDVPPARESAGLDSRTVRLTDERRLLRFRRLLKTHRPAVVEWESQRLQ
CCCCCCCCCHHCCCCCCEEEECHHHHHHHHHHHHHHCCCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA