| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
Click here to switch to the map view.
The map label for this gene is 17546349
Identifier: 17546349
GI number: 17546349
Start: 1750822
End: 1751112
Strand: Reverse
Name: 17546349
Synonym: RSc1630
Alternate gene names: NA
Gene position: 1751112-1750822 (Counterclockwise)
Preceding gene: 17546359
Following gene: 17546346
Centisome position: 47.12
GC content: 70.79
Gene sequence:
>291_bases GTGCGAGACTGCGCCGTTGCGCCGGCGGCGGGCACGTCCGCCCCGCCCTGCCGCCATTCCATGTACATCGTTGCCATCGC CTGGCTCTACGTCGTCCTGATGATGTCCCTGACCGAGCAATCGTGGATTGCCGGCATCGGCACGTTCATCCTGTACGGCG TGGCGCCGCTGTCGCTCTTTCTCTGGCTCGCGGGCACACCGGCCCGCAAGCGGCGCCGCAAGGAGCAGGAGCGGCAAGCG GCCGGGCAATCCGCGCACGGCAACCCGCACGGCGGCGACGGCCCGCCCTGA
Upstream 100 bases:
>100_bases CAACGCGAGCACTGGCGCGGGTTTCGAGCGGATACACCATCGCGGCCACCCCGCAATGGCTAAGTGAAGCATCAGGCTAT GTGCCTGCCGGCGCGATTTC
Downstream 100 bases:
>100_bases CGCTCGACTGGCCCACGCAAGCCGGATGCCCCGGCCACATCAGGCCGCCCGCCAGATCAGCGTTGCCATGCGCCCGGTCG TACGGTCGCGCCGGTAGGAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 96; Mature: 96
Protein sequence:
>96_residues MRDCAVAPAAGTSAPPCRHSMYIVAIAWLYVVLMMSLTEQSWIAGIGTFILYGVAPLSLFLWLAGTPARKRRRKEQERQA AGQSAHGNPHGGDGPP
Sequences:
>Translated_96_residues MRDCAVAPAAGTSAPPCRHSMYIVAIAWLYVVLMMSLTEQSWIAGIGTFILYGVAPLSLFLWLAGTPARKRRRKEQERQA AGQSAHGNPHGGDGPP >Mature_96_residues MRDCAVAPAAGTSAPPCRHSMYIVAIAWLYVVLMMSLTEQSWIAGIGTFILYGVAPLSLFLWLAGTPARKRRRKEQERQA AGQSAHGNPHGGDGPP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10333; Mature: 10333
Theoretical pI: Translated: 9.78; Mature: 9.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRDCAVAPAAGTSAPPCRHSMYIVAIAWLYVVLMMSLTEQSWIAGIGTFILYGVAPLSLF CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LWLAGTPARKRRRKEQERQAAGQSAHGNPHGGDGPP HHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure MRDCAVAPAAGTSAPPCRHSMYIVAIAWLYVVLMMSLTEQSWIAGIGTFILYGVAPLSLF CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LWLAGTPARKRRRKEQERQAAGQSAHGNPHGGDGPP HHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA