Definition Ralstonia solanacearum GMI1000, complete genome.
Accession NC_003295
Length 3,716,413

Click here to switch to the map view.

The map label for this gene is serB [C]

Identifier: 17546359

GI number: 17546359

Start: 1762107

End: 1762964

Strand: Reverse

Name: serB [C]

Synonym: RSc1640

Alternate gene names: 17546359

Gene position: 1762964-1762107 (Counterclockwise)

Preceding gene: 17546360

Following gene: 17546349

Centisome position: 47.44

GC content: 66.32

Gene sequence:

>858_bases
ATGCCCGTCGTCCTGCAAAGCCTGTCGCCGCTGTCCTCCAGCGATATCGAATCCGTCCGCGGCCTGTTCGGCCACGCCAC
GTACGCAATGCGCGCGCCCAACGTCGCCGTCATCGAATGGGTGCACGAACTGCCCAGCGAACTGCGCGTGCAGCTCGACG
CCATCTGCGCCAACCTGAAGCTGGACTACGCCTGGATTCCCGACGAGTGGACCTTCGGCGACTTCCGCGTGCTGGCGATG
GACATGGACTCGACCCTCATCACCATCGAGTGCATCGACGAGATCGCGGACTTCTGCGGCCTCAAGCCACAGGTGGCGGC
CATCACCGAAGCCTCGATGCGCGGCGAGATCAAGGATTTCAACGAAAGCCTGACGCGCCGGGTGGAGCTGCTCAAGGGCC
TGGACGCGAGCGTCCTGGAGCGCGTCTACGCCGAACGCCTGCAGCTGTCGCCCGGTGCCGAGCACATGCTCAAGGCCGTG
CAGGCGCTGGGCATCCGCACCCTGCTGGTGTCGGGCGGCTTCGATTTCTTCACCTCGCGCCTGCAGGAACGCCTGGGCCT
GGACCGCACGCGCGCCAACACGCTGGAGATCGTCGACGGCAAGCTCACCGGCCGCGTGCTCGGCGAGATCGTCAATGCGG
ATGTGAAGGCGCAGACGCTCAAGGCGTTCTGCCACGACCTGGGCGTGACGCCGCAGGAAGCCATCGCCATGGGCGACGGC
TCGAACGACCTGAAGATGATGGGCGCGGCGGGGCTGTCGGTGGCCTTCCGCGCCAAGCCCATCGTGCAGGCACAGGCCGA
CGTGGCGTTCAACGTCGTCGGCCTGGACGGCCTGCTCAATCTTTTCCCGCAGCCGTAA

Upstream 100 bases:

>100_bases
TGGCGGCGGCCCGCCTGTCGGTGGGGCGCCATCCCGGCGGAGGCGTTCGCTACAATAGCGGGCTTCCTCGGCGCTTCATT
TCCCGTTTTTCCGCCTCTCC

Downstream 100 bases:

>100_bases
GCGCCACGGCAACGCCCTGCGGGCCGCTCAGGCCGCCCGCAGGTGCGCTTCCATCGCCTTCTTCAGGTCGGCGATCAGGT
CGCGCGGGTCTTCCAGGCCG

Product: phosphoserine phosphatase

Products: NA

Alternate protein names: PSP; PSPase; O-phosphoserine phosphohydrolase [H]

Number of amino acids: Translated: 285; Mature: 284

Protein sequence:

>285_residues
MPVVLQSLSPLSSSDIESVRGLFGHATYAMRAPNVAVIEWVHELPSELRVQLDAICANLKLDYAWIPDEWTFGDFRVLAM
DMDSTLITIECIDEIADFCGLKPQVAAITEASMRGEIKDFNESLTRRVELLKGLDASVLERVYAERLQLSPGAEHMLKAV
QALGIRTLLVSGGFDFFTSRLQERLGLDRTRANTLEIVDGKLTGRVLGEIVNADVKAQTLKAFCHDLGVTPQEAIAMGDG
SNDLKMMGAAGLSVAFRAKPIVQAQADVAFNVVGLDGLLNLFPQP

Sequences:

>Translated_285_residues
MPVVLQSLSPLSSSDIESVRGLFGHATYAMRAPNVAVIEWVHELPSELRVQLDAICANLKLDYAWIPDEWTFGDFRVLAM
DMDSTLITIECIDEIADFCGLKPQVAAITEASMRGEIKDFNESLTRRVELLKGLDASVLERVYAERLQLSPGAEHMLKAV
QALGIRTLLVSGGFDFFTSRLQERLGLDRTRANTLEIVDGKLTGRVLGEIVNADVKAQTLKAFCHDLGVTPQEAIAMGDG
SNDLKMMGAAGLSVAFRAKPIVQAQADVAFNVVGLDGLLNLFPQP
>Mature_284_residues
PVVLQSLSPLSSSDIESVRGLFGHATYAMRAPNVAVIEWVHELPSELRVQLDAICANLKLDYAWIPDEWTFGDFRVLAMD
MDSTLITIECIDEIADFCGLKPQVAAITEASMRGEIKDFNESLTRRVELLKGLDASVLERVYAERLQLSPGAEHMLKAVQ
ALGIRTLLVSGGFDFFTSRLQERLGLDRTRANTLEIVDGKLTGRVLGEIVNADVKAQTLKAFCHDLGVTPQEAIAMGDGS
NDLKMMGAAGLSVAFRAKPIVQAQADVAFNVVGLDGLLNLFPQP

Specific function: Unknown

COG id: COG0560

COG function: function code E; Phosphoserine phosphatase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ACT domain [H]

Homologues:

Organism=Escherichia coli, GI1790849, Length=206, Percent_Identity=45.6310679611651, Blast_Score=172, Evalue=3e-44,
Organism=Saccharomyces cerevisiae, GI6321647, Length=208, Percent_Identity=38.9423076923077, Blast_Score=145, Evalue=5e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002912
- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006383
- InterPro:   IPR023190
- InterPro:   IPR004469 [H]

Pfam domain/function: PF01842 ACT; PF00702 Hydrolase [H]

EC number: =3.1.3.3 [H]

Molecular weight: Translated: 31073; Mature: 30942

Theoretical pI: Translated: 4.58; Mature: 4.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVVLQSLSPLSSSDIESVRGLFGHATYAMRAPNVAVIEWVHELPSELRVQLDAICANLK
CCEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCHHHHHHHHHHHHHHCE
LDYAWIPDEWTFGDFRVLAMDMDSTLITIECIDEIADFCGLKPQVAAITEASMRGEIKDF
EEEEECCCCCCCCCEEEEEEECCCCEEHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHH
NESLTRRVELLKGLDASVLERVYAERLQLSPGAEHMLKAVQALGIRTLLVSGGFDFFTSR
HHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHH
LQERLGLDRTRANTLEIVDGKLTGRVLGEIVNADVKAQTLKAFCHDLGVTPQEAIAMGDG
HHHHHCCCHHCCCEEEEECCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHEEECCC
SNDLKMMGAAGLSVAFRAKPIVQAQADVAFNVVGLDGLLNLFPQP
CCCCEECCCCCCEEEEECCCHHEECCCCEEEEECHHHHHHCCCCC
>Mature Secondary Structure 
PVVLQSLSPLSSSDIESVRGLFGHATYAMRAPNVAVIEWVHELPSELRVQLDAICANLK
CEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCHHHHHHHHHHHHHHCE
LDYAWIPDEWTFGDFRVLAMDMDSTLITIECIDEIADFCGLKPQVAAITEASMRGEIKDF
EEEEECCCCCCCCCEEEEEEECCCCEEHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHH
NESLTRRVELLKGLDASVLERVYAERLQLSPGAEHMLKAVQALGIRTLLVSGGFDFFTSR
HHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHH
LQERLGLDRTRANTLEIVDGKLTGRVLGEIVNADVKAQTLKAFCHDLGVTPQEAIAMGDG
HHHHHCCCHHCCCEEEEECCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHEEECCC
SNDLKMMGAAGLSVAFRAKPIVQAQADVAFNVVGLDGLLNLFPQP
CCCCEECCCCCCEEEEECCCHHEECCCCEEEEECHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]