| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is ppk [H]
Identifier: 17546255
GI number: 17546255
Start: 1640128
End: 1642341
Strand: Reverse
Name: ppk [H]
Synonym: RSc1536
Alternate gene names: 17546255
Gene position: 1642341-1640128 (Counterclockwise)
Preceding gene: 17546257
Following gene: 17546243
Centisome position: 44.19
GC content: 66.8
Gene sequence:
>2214_bases ATGAAAAAGTGGCCGGATAGTCATTCGTTGGAAACCACCATGTCGACCCTTCCGACCGGCGACCTGCTCAATCGGGAAGT CGGCATCCTCGAGTTCAACGCGCGCGTGCTCGCACAGGCGGCCGACCCGGGCGTTCCGCTGATGGAGCGCTTGAAGTTCA TCTGCATCGTGTCGAGCAATCTGGATGAGTTCTTTGAGATCCGCGTCGCCGGGCTGAAGGAACAGATGCGCGACAACGCC TCGGCCCTCACCCCCGACGGCCTGTCGGTGCAGCAGGCATTTGGCGTGGTGACGGAGCGGGTACGGCAGCTGGTCGCGCA ACAGTATGCCATGCTGCAGGACGAAATCCTGCCGCTGCTCGAGAAGGAAGGCGTGTTCTTCCACATGACCACCAACTGGA ACGAAGCCCAGCGCGCCTGGTGCCGCGGCTTCTTCCAGCGTGAGCTGGTGCCCATCCTGACGCCGATGGCGCTGGACCCG GCCCACCCCTTCCCGCGCGTGCTCAACAAGAGCCTGAACTTCATCATCGAACTGTCGGGCAAGGATGCCTTCGGGCGCGA AGCCGAACTGGCCATCGTGCAGGCGCCGCGCGCCCTGCCCCGCCTGGTGCAGATGCCGCCGGAGCTGTCGGGGTATCCGT ACGGCTTCGTGCTGCTGTCGTCGTTCATGCAGGGCTTCGTGCACGAGCTGTTTCCGCAGATCGACGTGCATGGCTGCTAC CAGTTCCGCGTCACGCGCAACTCCGACCTGTTCGTCTCCGAAGACGAAATCACCGACCTGCGCGAAGCGCTGCAAGGCGA ACTGTCGACCCGGCACTTCGGCGATGCGGTGCGGCTGGAGATCGCGCACGACATCTCGCCCGCGCTGGCGCGCCGGCTGC AGCAGGAATTCGGCCTGTCCGAAGCCGACTGCTACCGCGTCAAGGGGCCGGTGAACCTGGTGCGCCTGCTGCAGGTGCCC GACCTGGTGGACCGCCCGATGCTGAAGTACCCGCCGCATGCGCCCGCCGCCGTGAAGGCCGTGGCCGCGTCGTCGAGCAT CTTCGATGCCATCCGCCAGGGCGACATCCTGATGCACCACCCGTACGAGAGCTTCATGCCCGTGCTGGAGCTGCTGCAGC AGGCCGCGCGCGATCCGGACGTGGTCGCCATCAAGCAGACCGTGTACCGCACCGGCAACGAATCCCCGGTGATGGAGGCG CTGATCAAGGCCGCCCGCAACGGCAAGGAAGTGACGGTGGTGGTCGAGCTGCTGGCGCGCTTCGACGAAGAGACCAACAT CAACTGGGCCGACCAGCTCGAATCGGCCGGCGCCCACGTGGTGTACGGCGTGGTCGGCCACAAATGCCACGCCAAGATGC TGCTGGTGGTGCGCCGCGAGGCCGCCGGCGGCAAGGCCAAGACCGTCAAGCTGCGCCGCTATGCGCATCTCGGCACCGGC AACTACCACCCGAAGACCGCCCGGCTCTATACCGACTTCGGCCTGATGACGGCCGACGAAGCCATCTGCGAAGACGTCCA CCACGTGTTCCAGCTGCTGACCGGCACCGGCGCCCAGGTGAAGCTGCACCACCTGTGGCACTCGCCGTTCACGATGCACG CCAACCTGATCGAGCACATCCGCGCGGAAGCGCGCGCCGCCCGTGCCGGCAAGCGCGCGCGCATCATCGGCAAGATGAAC GCGCTGCTGGAGCCGACCATCATCGACGAGCTCTACAAGGCCTCGCGCGCGGGCGTCAAGATCGACCTGATCGTGCGCGG CGTGTGCGCGCTCAGGGCCGGCGTGCCGGGGCTGTCGGAACACATCAGCGTGCGCTCGCTCGTCGGGCGCTTCCTGGAGC ATCACCGCGTCTACTACTTCCATGCCGGCGGCGAGGAAGTCGTCTATCTGTCCAGCGCCGACTGGATGGACCGCAACCTG TTCCGCCGCGTCGAGGTCGCCTTCCCGGTGCTCGATCGCAAGCTGAAGGCGCGCGTGATCCGCGAAAGCCTGCAGGTGCA CCTGCGCGACAACGCCTCGGCCTGGGTGATGCAGCCGAACGGCTCGTACGTGCGGCGCCAGACCAAGGGCAAGCACGTGC GCGTGAGCCAGATGGATCTGCTGAACCACTTCTCGCCGCAAGCCGCCGCGGCCGCGGAAACGGCCGCCGCCGTCGCAGCG GCCACCGCGACCGAGCCGCCGCGCAAGCCGCCCGCGGAAATCTCCGCGGGCTGA
Upstream 100 bases:
>100_bases ACGCAGGGGGATTGTGATGCACGACACAGGGCAACAAAATATGTCTTTGTTGTGTCCTATGCGTGACAATTCTAATGCGT CACAAACTTGACACGCGACT
Downstream 100 bases:
>100_bases ACGCCCCGACCCGCCAACAAAAAACGCACGCCCGAACGGCGTGCGTTTTTGCTTGAAGGGCGGAAAAGCCCGAAGCCGTC AGGCCGCGCGCTCGGCGCCT
Product: polyphosphate kinase
Products: NA
Alternate protein names: ATP-polyphosphate phosphotransferase; Polyphosphoric acid kinase [H]
Number of amino acids: Translated: 737; Mature: 737
Protein sequence:
>737_residues MKKWPDSHSLETTMSTLPTGDLLNREVGILEFNARVLAQAADPGVPLMERLKFICIVSSNLDEFFEIRVAGLKEQMRDNA SALTPDGLSVQQAFGVVTERVRQLVAQQYAMLQDEILPLLEKEGVFFHMTTNWNEAQRAWCRGFFQRELVPILTPMALDP AHPFPRVLNKSLNFIIELSGKDAFGREAELAIVQAPRALPRLVQMPPELSGYPYGFVLLSSFMQGFVHELFPQIDVHGCY QFRVTRNSDLFVSEDEITDLREALQGELSTRHFGDAVRLEIAHDISPALARRLQQEFGLSEADCYRVKGPVNLVRLLQVP DLVDRPMLKYPPHAPAAVKAVAASSSIFDAIRQGDILMHHPYESFMPVLELLQQAARDPDVVAIKQTVYRTGNESPVMEA LIKAARNGKEVTVVVELLARFDEETNINWADQLESAGAHVVYGVVGHKCHAKMLLVVRREAAGGKAKTVKLRRYAHLGTG NYHPKTARLYTDFGLMTADEAICEDVHHVFQLLTGTGAQVKLHHLWHSPFTMHANLIEHIRAEARAARAGKRARIIGKMN ALLEPTIIDELYKASRAGVKIDLIVRGVCALRAGVPGLSEHISVRSLVGRFLEHHRVYYFHAGGEEVVYLSSADWMDRNL FRRVEVAFPVLDRKLKARVIRESLQVHLRDNASAWVMQPNGSYVRRQTKGKHVRVSQMDLLNHFSPQAAAAAETAAAVAA ATATEPPRKPPAEISAG
Sequences:
>Translated_737_residues MKKWPDSHSLETTMSTLPTGDLLNREVGILEFNARVLAQAADPGVPLMERLKFICIVSSNLDEFFEIRVAGLKEQMRDNA SALTPDGLSVQQAFGVVTERVRQLVAQQYAMLQDEILPLLEKEGVFFHMTTNWNEAQRAWCRGFFQRELVPILTPMALDP AHPFPRVLNKSLNFIIELSGKDAFGREAELAIVQAPRALPRLVQMPPELSGYPYGFVLLSSFMQGFVHELFPQIDVHGCY QFRVTRNSDLFVSEDEITDLREALQGELSTRHFGDAVRLEIAHDISPALARRLQQEFGLSEADCYRVKGPVNLVRLLQVP DLVDRPMLKYPPHAPAAVKAVAASSSIFDAIRQGDILMHHPYESFMPVLELLQQAARDPDVVAIKQTVYRTGNESPVMEA LIKAARNGKEVTVVVELLARFDEETNINWADQLESAGAHVVYGVVGHKCHAKMLLVVRREAAGGKAKTVKLRRYAHLGTG NYHPKTARLYTDFGLMTADEAICEDVHHVFQLLTGTGAQVKLHHLWHSPFTMHANLIEHIRAEARAARAGKRARIIGKMN ALLEPTIIDELYKASRAGVKIDLIVRGVCALRAGVPGLSEHISVRSLVGRFLEHHRVYYFHAGGEEVVYLSSADWMDRNL FRRVEVAFPVLDRKLKARVIRESLQVHLRDNASAWVMQPNGSYVRRQTKGKHVRVSQMDLLNHFSPQAAAAAETAAAVAA ATATEPPRKPPAEISAG >Mature_737_residues MKKWPDSHSLETTMSTLPTGDLLNREVGILEFNARVLAQAADPGVPLMERLKFICIVSSNLDEFFEIRVAGLKEQMRDNA SALTPDGLSVQQAFGVVTERVRQLVAQQYAMLQDEILPLLEKEGVFFHMTTNWNEAQRAWCRGFFQRELVPILTPMALDP AHPFPRVLNKSLNFIIELSGKDAFGREAELAIVQAPRALPRLVQMPPELSGYPYGFVLLSSFMQGFVHELFPQIDVHGCY QFRVTRNSDLFVSEDEITDLREALQGELSTRHFGDAVRLEIAHDISPALARRLQQEFGLSEADCYRVKGPVNLVRLLQVP DLVDRPMLKYPPHAPAAVKAVAASSSIFDAIRQGDILMHHPYESFMPVLELLQQAARDPDVVAIKQTVYRTGNESPVMEA LIKAARNGKEVTVVVELLARFDEETNINWADQLESAGAHVVYGVVGHKCHAKMLLVVRREAAGGKAKTVKLRRYAHLGTG NYHPKTARLYTDFGLMTADEAICEDVHHVFQLLTGTGAQVKLHHLWHSPFTMHANLIEHIRAEARAARAGKRARIIGKMN ALLEPTIIDELYKASRAGVKIDLIVRGVCALRAGVPGLSEHISVRSLVGRFLEHHRVYYFHAGGEEVVYLSSADWMDRNL FRRVEVAFPVLDRKLKARVIRESLQVHLRDNASAWVMQPNGSYVRRQTKGKHVRVSQMDLLNHFSPQAAAAAETAAAVAA ATATEPPRKPPAEISAG
Specific function: Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) [H]
COG id: COG0855
COG function: function code P; Polyphosphate kinase
Gene ontology:
Cell location: Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the polyphosphate kinase family [H]
Homologues:
Organism=Escherichia coli, GI1788847, Length=649, Percent_Identity=35.4391371340524, Blast_Score=383, Evalue=1e-107,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003414 [H]
Pfam domain/function: PF02503 PP_kinase [H]
EC number: =2.7.4.1 [H]
Molecular weight: Translated: 82267; Mature: 82267
Theoretical pI: Translated: 7.97; Mature: 7.97
Prosite motif: PS00687 ALDEHYDE_DEHYDR_GLU
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKWPDSHSLETTMSTLPTGDLLNREVGILEFNARVLAQAADPGVPLMERLKFICIVSSN CCCCCCCCCHHHHHHHCCCCHHHCCCCCEEEECHHHHHHCCCCCCCHHHCCEEEEEEECC LDEFFEIRVAGLKEQMRDNASALTPDGLSVQQAFGVVTERVRQLVAQQYAMLQDEILPLL HHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EKEGVFFHMTTNWNEAQRAWCRGFFQRELVPILTPMALDPAHPFPRVLNKSLNFIIELSG HCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCEEEEECC KDAFGREAELAIVQAPRALPRLVQMPPELSGYPYGFVLLSSFMQGFVHELFPQIDVHGCY CCCCCCCCCEEEEECCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEE QFRVTRNSDLFVSEDEITDLREALQGELSTRHFGDAVRLEIAHDISPALARRLQQEFGLS EEEEECCCCEEECCHHHHHHHHHHHCCCCHHHCCCEEEEEEHHCCCHHHHHHHHHHHCCC EADCYRVKGPVNLVRLLQVPDLVDRPMLKYPPHAPAAVKAVAASSSIFDAIRQGDILMHH CCCEEEECCHHHHHHHHHCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEC PYESFMPVLELLQQAARDPDVVAIKQTVYRTGNESPVMEALIKAARNGKEVTVVVELLAR CHHHHHHHHHHHHHHCCCCCEEEEHHHHHHCCCCCHHHHHHHHHHCCCCEEHHHHHHHHH FDEETNINWADQLESAGAHVVYGVVGHKCHAKMLLVVRREAAGGKAKTVKLRRYAHLGTG CCCCCCCCHHHHHHCCCCEEEEEHHCCHHHHHHEEEEEECCCCCCEEEEEEEHHEECCCC NYHPKTARLYTDFGLMTADEAICEDVHHVFQLLTGTGAQVKLHHLWHSPFTMHANLIEHI CCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHH RAEARAARAGKRARIIGKMNALLEPTIIDELYKASRAGVKIDLIVRGVCALRAGVPGLSE HHHHHHHHCCCHHHHHHHHHHHHCHHHHHHHHHHHHCCCEEEHHHHHHHHHHCCCCCHHH HISVRSLVGRFLEHHRVYYFHAGGEEVVYLSSADWMDRNLFRRVEVAFPVLDRKLKARVI HHHHHHHHHHHHHHCEEEEEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH RESLQVHLRDNASAWVMQPNGSYVRRQTKGKHVRVSQMDLLNHFSPQAAAAAETAAAVAA HHHHHEEEECCCCEEEECCCCCCHHHHCCCCEEEEHHHHHHHHCCCHHHHHHHHHHHHHH ATATEPPRKPPAEISAG HHCCCCCCCCCCCCCCC >Mature Secondary Structure MKKWPDSHSLETTMSTLPTGDLLNREVGILEFNARVLAQAADPGVPLMERLKFICIVSSN CCCCCCCCCHHHHHHHCCCCHHHCCCCCEEEECHHHHHHCCCCCCCHHHCCEEEEEEECC LDEFFEIRVAGLKEQMRDNASALTPDGLSVQQAFGVVTERVRQLVAQQYAMLQDEILPLL HHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EKEGVFFHMTTNWNEAQRAWCRGFFQRELVPILTPMALDPAHPFPRVLNKSLNFIIELSG HCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCEEEEECC KDAFGREAELAIVQAPRALPRLVQMPPELSGYPYGFVLLSSFMQGFVHELFPQIDVHGCY CCCCCCCCCEEEEECCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEE QFRVTRNSDLFVSEDEITDLREALQGELSTRHFGDAVRLEIAHDISPALARRLQQEFGLS EEEEECCCCEEECCHHHHHHHHHHHCCCCHHHCCCEEEEEEHHCCCHHHHHHHHHHHCCC EADCYRVKGPVNLVRLLQVPDLVDRPMLKYPPHAPAAVKAVAASSSIFDAIRQGDILMHH CCCEEEECCHHHHHHHHHCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEC PYESFMPVLELLQQAARDPDVVAIKQTVYRTGNESPVMEALIKAARNGKEVTVVVELLAR CHHHHHHHHHHHHHHCCCCCEEEEHHHHHHCCCCCHHHHHHHHHHCCCCEEHHHHHHHHH FDEETNINWADQLESAGAHVVYGVVGHKCHAKMLLVVRREAAGGKAKTVKLRRYAHLGTG CCCCCCCCHHHHHHCCCCEEEEEHHCCHHHHHHEEEEEECCCCCCEEEEEEEHHEECCCC NYHPKTARLYTDFGLMTADEAICEDVHHVFQLLTGTGAQVKLHHLWHSPFTMHANLIEHI CCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHH RAEARAARAGKRARIIGKMNALLEPTIIDELYKASRAGVKIDLIVRGVCALRAGVPGLSE HHHHHHHHCCCHHHHHHHHHHHHCHHHHHHHHHHHHCCCEEEHHHHHHHHHHCCCCCHHH HISVRSLVGRFLEHHRVYYFHAGGEEVVYLSSADWMDRNLFRRVEVAFPVLDRKLKARVI HHHHHHHHHHHHHHCEEEEEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH RESLQVHLRDNASAWVMQPNGSYVRRQTKGKHVRVSQMDLLNHFSPQAAAAAETAAAVAA HHHHHEEEECCCCEEEECCCCCCHHHHCCCCEEEEHHHHHHHHCCCHHHHHHHHHHHHHH ATATEPPRKPPAEISAG HHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA