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The map label for this gene is yhbY [C]

Identifier: 17546243

GI number: 17546243

Start: 1627459

End: 1627956

Strand: Reverse

Name: yhbY [C]

Synonym: RSc1524

Alternate gene names: 17546243

Gene position: 1627956-1627459 (Counterclockwise)

Preceding gene: 17546255

Following gene: 17546233

Centisome position: 43.8

GC content: 67.87

Gene sequence:

>498_bases
ATGCCAGCCCTGACCCTTTCCCCTGCCCGCCGATCGGAACTGCGCTCGCAGGCGCATGCATTGAACCCGGTCGTCCTCAT
CGGCGCGGAAGGTCTGACGAAGGCCGTCCTGGCCGAGATCGACCGTTCGCTGGCGGCCCACGGGCTGATCAAGATCCGCG
TGTTCGGCGATGACCGCGAAGCGCGCATCGAGCTTTACGACACCATCTGCGCGCGGCTGCAGGCTGCACCGGTCCAGCAC
ATCGGCAAGCTGCTGGTGATCTGGCGCGACGGCCCGGTCTACCTGAAGGAAAACCAGCCCAAGGAACTGCACCCCGTCCG
CAAGATCGCCGGCGCCGCGCCGCGTTCCGTGGTGGTGCGCAAGCCCAACCCGAACAGCACGCGCCGGCCGAAGCCGGTGC
GCCTGAGCGTGCTGGGCAACGAGCGTGTCACGGCCGGCGGCAACGTCAAGCGCGCCAAGCCGCGCCAGGCCAGCCACAAG
AAAAAAGCGCTGTCCTGA

Upstream 100 bases:

>100_bases
TGCCATCGAATTTGCGCCGCGCCGCCAAAACATGGCGGATGCGGCCGGTTTTGGCGGATAATACGCGCCGTTTGTCCTTT
TGCGCGAATCCGCGTCATTT

Downstream 100 bases:

>100_bases
TCGGCACGGATACAAAAAAACGACCGGCCAATCCAGCCGGTCTTTTTTTTCGGGGCGCTCAGGCAGGCTGCCGGATGCCG
GCCACCTTCCAGATCAGCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 165; Mature: 164

Protein sequence:

>165_residues
MPALTLSPARRSELRSQAHALNPVVLIGAEGLTKAVLAEIDRSLAAHGLIKIRVFGDDREARIELYDTICARLQAAPVQH
IGKLLVIWRDGPVYLKENQPKELHPVRKIAGAAPRSVVVRKPNPNSTRRPKPVRLSVLGNERVTAGGNVKRAKPRQASHK
KKALS

Sequences:

>Translated_165_residues
MPALTLSPARRSELRSQAHALNPVVLIGAEGLTKAVLAEIDRSLAAHGLIKIRVFGDDREARIELYDTICARLQAAPVQH
IGKLLVIWRDGPVYLKENQPKELHPVRKIAGAAPRSVVVRKPNPNSTRRPKPVRLSVLGNERVTAGGNVKRAKPRQASHK
KKALS
>Mature_164_residues
PALTLSPARRSELRSQAHALNPVVLIGAEGLTKAVLAEIDRSLAAHGLIKIRVFGDDREARIELYDTICARLQAAPVQHI
GKLLVIWRDGPVYLKENQPKELHPVRKIAGAAPRSVVVRKPNPNSTRRPKPVRLSVLGNERVTAGGNVKRAKPRQASHKK
KALS

Specific function: Unknown

COG id: COG1534

COG function: function code J; Predicted RNA-binding protein containing KH domain, possibly ribosomal protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 CRM domain [H]

Homologues:

Organism=Escherichia coli, GI1789570, Length=86, Percent_Identity=43.0232558139535, Blast_Score=75, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001890
- InterPro:   IPR017924
- ProDom:   PD010559 [H]

Pfam domain/function: PF01985 CRS1_YhbY [H]

EC number: NA

Molecular weight: Translated: 18095; Mature: 17964

Theoretical pI: Translated: 11.71; Mature: 11.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPALTLSPARRSELRSQAHALNPVVLIGAEGLTKAVLAEIDRSLAAHGLIKIRVFGDDRE
CCCCCCCCHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHCCEEEEEEECCCCC
ARIELYDTICARLQAAPVQHIGKLLVIWRDGPVYLKENQPKELHPVRKIAGAAPRSVVVR
HHHHHHHHHHHHHHCCCHHHCCEEEEEECCCCEEEECCCCCHHHHHHHHHCCCCCEEEEE
KPNPNSTRRPKPVRLSVLGNERVTAGGNVKRAKPRQASHKKKALS
CCCCCCCCCCCCEEEEEECCCEEECCCCCCCCCCCHHHHHHHCCC
>Mature Secondary Structure 
PALTLSPARRSELRSQAHALNPVVLIGAEGLTKAVLAEIDRSLAAHGLIKIRVFGDDRE
CCCCCCCHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHCCEEEEEEECCCCC
ARIELYDTICARLQAAPVQHIGKLLVIWRDGPVYLKENQPKELHPVRKIAGAAPRSVVVR
HHHHHHHHHHHHHHCCCHHHCCEEEEEECCCCEEEECCCCCHHHHHHHHHCCCCCEEEEE
KPNPNSTRRPKPVRLSVLGNERVTAGGNVKRAKPRQASHKKKALS
CCCCCCCCCCCCEEEEEECCCEEECCCCCCCCCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]