| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is creA [H]
Identifier: 17546190
GI number: 17546190
Start: 1574322
End: 1574831
Strand: Reverse
Name: creA [H]
Synonym: RSc1471
Alternate gene names: 17546190
Gene position: 1574831-1574322 (Counterclockwise)
Preceding gene: 17546191
Following gene: 17546189
Centisome position: 42.38
GC content: 63.73
Gene sequence:
>510_bases ATGCATCGCCTTTTTTTCCTTTGCCACCCGCAAACCATGCCCGCCCCGATCCTTTCCATCGCCCTGCTCACCGCCGCCCT GCTGTCGACCACCGCCTCCGCCGAGGACATCGGCAGCGTCAATACCAACTTCCGCATCACCGGGTCAGACAAGATCGTTA TCGAAGCCTTCGATGATCCGCTGGTGGGCGGCGTCACCTGCTATGTATCGCGCGCCCGCACGGGCGGCATCAAGGGCACC CTGGGTGTGGCCGAAGACGTGAGCGAAGCCTCGGTGGCCTGCCGGCAGGTCGGCGAGATCCGCTTCGTCAAGCCGCTGCC GCAGCAGGACGACATGTTCACGCAGCGCCTGTCGCTGATCTTCAAGACGCTGCACGTGGTGCGCACGGTGGATCGCAAGC GCAACGTGCTGGTCTACCTGACCTATTCCGACAAGGTCATTTCCGGCAGCCCCAAGAACAGTGTGACGGCGGTGCCGATC CCGGCCGGCCAGCCGATTCCGGTCAAGTAG
Upstream 100 bases:
>100_bases CATGGACGCGCTGCATCGCCGCATCGAGCAGTCCGCCCGGGCCGGCCCGGGTCCGGAGGCCGATGACCCCACGCCATGGC CGCCCGCGGCCCTGCTTTGA
Downstream 100 bases:
>100_bases AGGCAGCGCCAATGGCGATGCTCCATATTGGTGCATCGCCAAGCAAGCGTGGCAGCGAAACAACGCATGATGGTGCATAC GTAGGCTTACGTATGGTGCA
Product: CREA signal peptide protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 169; Mature: 169
Protein sequence:
>169_residues MHRLFFLCHPQTMPAPILSIALLTAALLSTTASAEDIGSVNTNFRITGSDKIVIEAFDDPLVGGVTCYVSRARTGGIKGT LGVAEDVSEASVACRQVGEIRFVKPLPQQDDMFTQRLSLIFKTLHVVRTVDRKRNVLVYLTYSDKVISGSPKNSVTAVPI PAGQPIPVK
Sequences:
>Translated_169_residues MHRLFFLCHPQTMPAPILSIALLTAALLSTTASAEDIGSVNTNFRITGSDKIVIEAFDDPLVGGVTCYVSRARTGGIKGT LGVAEDVSEASVACRQVGEIRFVKPLPQQDDMFTQRLSLIFKTLHVVRTVDRKRNVLVYLTYSDKVISGSPKNSVTAVPI PAGQPIPVK >Mature_169_residues MHRLFFLCHPQTMPAPILSIALLTAALLSTTASAEDIGSVNTNFRITGSDKIVIEAFDDPLVGGVTCYVSRARTGGIKGT LGVAEDVSEASVACRQVGEIRFVKPLPQQDDMFTQRLSLIFKTLHVVRTVDRKRNVLVYLTYSDKVISGSPKNSVTAVPI PAGQPIPVK
Specific function: Unknown
COG id: COG3045
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1790859, Length=134, Percent_Identity=58.955223880597, Blast_Score=157, Evalue=5e-40,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010292 [H]
Pfam domain/function: PF05981 CreA [H]
EC number: NA
Molecular weight: Translated: 18252; Mature: 18252
Theoretical pI: Translated: 9.27; Mature: 9.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHRLFFLCHPQTMPAPILSIALLTAALLSTTASAEDIGSVNTNFRITGSDKIVIEAFDDP CCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCHHCCCCCCCEEEECCCEEEEEECCCC LVGGVTCYVSRARTGGIKGTLGVAEDVSEASVACRQVGEIRFVKPLPQQDDMFTQRLSLI CCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHH FKTLHVVRTVDRKRNVLVYLTYSDKVISGSPKNSVTAVPIPAGQPIPVK HHHHHHHHHHHCCCCEEEEEEECCEEECCCCCCCEEEEECCCCCCCCCC >Mature Secondary Structure MHRLFFLCHPQTMPAPILSIALLTAALLSTTASAEDIGSVNTNFRITGSDKIVIEAFDDP CCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCHHCCCCCCCEEEECCCEEEEEECCCC LVGGVTCYVSRARTGGIKGTLGVAEDVSEASVACRQVGEIRFVKPLPQQDDMFTQRLSLI CCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHH FKTLHVVRTVDRKRNVLVYLTYSDKVISGSPKNSVTAVPIPAGQPIPVK HHHHHHHHHHHCCCCEEEEEEECCEEECCCCCCCEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]