| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is 17546176
Identifier: 17546176
GI number: 17546176
Start: 1558616
End: 1558891
Strand: Reverse
Name: 17546176
Synonym: RSc1457
Alternate gene names: NA
Gene position: 1558891-1558616 (Counterclockwise)
Preceding gene: 17546177
Following gene: 17546174
Centisome position: 41.95
GC content: 68.48
Gene sequence:
>276_bases ATGACCGATCCGACCGCCTTCTTCCCGCCTTCCGGCAACGATGTCGACAGCGATGCCGGCAGTGCGCCCAGCGGCACCCT GTTCAGCCGCCCGGACAGCCCGTGCATCGGCATCTGCTCGACGCTCTTCGACGAGGTCTGCCAGGGGTGCGGCCGCACCG CGCTCGAAGTCAGCAACTGGGTGTTCATGTCCGACGACGAGCGCAATGCGGTCTGGACCCGCATCCTCACCGAGGGCTCC GCGCAGGGCTTCAACCCCGACGGCAGCCGCCGCTGA
Upstream 100 bases:
>100_bases CGCTGGTGAACTCGGCGCTGGCGCTGTGCGCGGCGGCCGATCACGTCGGCCAGCGCACCGGCACCTGAAGCGCGCCCGCG CGCCCGGTAGAATAACGGCC
Downstream 100 bases:
>100_bases CAGCACAAACCCGGCCGAGGCCGGGTCTGCGGTCAATGGGAGCCGGTTCGCGGAACGTCAGGTCGCCTGCGCGGGCTTGA GCTGCAGCGCCTTGTACTCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 91; Mature: 90
Protein sequence:
>91_residues MTDPTAFFPPSGNDVDSDAGSAPSGTLFSRPDSPCIGICSTLFDEVCQGCGRTALEVSNWVFMSDDERNAVWTRILTEGS AQGFNPDGSRR
Sequences:
>Translated_91_residues MTDPTAFFPPSGNDVDSDAGSAPSGTLFSRPDSPCIGICSTLFDEVCQGCGRTALEVSNWVFMSDDERNAVWTRILTEGS AQGFNPDGSRR >Mature_90_residues TDPTAFFPPSGNDVDSDAGSAPSGTLFSRPDSPCIGICSTLFDEVCQGCGRTALEVSNWVFMSDDERNAVWTRILTEGSA QGFNPDGSRR
Specific function: Unknown
COG id: COG3313
COG function: function code R; Predicted Fe-S protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9724; Mature: 9592
Theoretical pI: Translated: 3.94; Mature: 3.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 4.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDPTAFFPPSGNDVDSDAGSAPSGTLFSRPDSPCIGICSTLFDEVCQGCGRTALEVSNW CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEECCCE VFMSDDERNAVWTRILTEGSAQGFNPDGSRR EEECCCCCCHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure TDPTAFFPPSGNDVDSDAGSAPSGTLFSRPDSPCIGICSTLFDEVCQGCGRTALEVSNW CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEECCCE VFMSDDERNAVWTRILTEGSAQGFNPDGSRR EEECCCCCCHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA