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The map label for this gene is 17546177

Identifier: 17546177

GI number: 17546177

Start: 1558924

End: 1560783

Strand: Reverse

Name: 17546177

Synonym: RSc1458

Alternate gene names: NA

Gene position: 1560783-1558924 (Counterclockwise)

Preceding gene: 17546180

Following gene: 17546176

Centisome position: 42.0

GC content: 71.02

Gene sequence:

>1860_bases
ATGCCCTCAAGAATCGAAGATTACGCGCTGATCGGTGATTGCGAAACCGCCGCCCTGGTGTCTCGCGACGGCTCGATCGA
CTGGCTGTGCTGGCCCCGGTTCGATTCCGGCGCCTGTTTCGCCGCGCTGCTCGGCACGCCCGACCACGGCCGCTGGCGCA
TCGCCCCGCAAGGCCCCATCCGCGCCGTCCGCCGCCGCTACCTGCCCGGCACGCTGATCCTGGAGACCGTGTTCGAGACC
GACACCGGCACCGCCAGCCTGACCGATCTGATGCCCTCCCGCCTGCCGGGCACCCCCAGCGCGCGCGAAGACACCTCCGA
CCTGGTGCGCATCGTGCGCGGGCTGTCAGGTACCGTCGCCATGCGCATGGACCTCACGCTGCGCTTTGACTACGGCGCCT
CCGTCCCGTGGGTCAGCCGCGTGACGGAAGAAACCGGCGCCGTGTCCGACGACCCGTGCGAGATGCCCGGCTGCGTACTG
CGCGCCATCGCCGGCCCCGACATGGTGGTGCTGCGCACGCCGGCGCAGGTGCGCGGCGAGAACCTGTCCACCGTCGCCGA
GTTTGCCGTGGCAGCCGGCGAGGCGATGCCCTTCGTGCTGACGCATTCGCCATCGCACCGGCCGCTGCCCGCATCGATCG
ATGCCATCGAAGCCCAGCGCGACACGGAGCCCCGCTGGCGCGCCTGGTCCGGCCGCTGCCGGGGCGCCGGCGAATGGGCC
GAGGCCATCGAGCGCTCCCTCATCACGCTCAAGGCGCTGACCTATCATCCGACCGGCGGCCTGGTGGCCGCGCCCACCAC
CTCCTTGCCCGAACAGCCCGGCGGCGTGCGCAACTGGGACTACCGCTACTGCTGGCTGCGCGATGCCACCCTGACCCTGC
TCGCGCTGATGAACGCGGGCTACTACAGCGAAGCCCGCGCCTGGCGCGCATGGCTGGAGCGCGCGGTGGCCGGCAGCCCG
GCGCAGATCCAGATCATGTACGGCATCGCCGGCGAACGCCGCCTGGGCGAGTGGACCGTGCCGTGGCTGCCCGGCTACGA
AGGCGCGCAGCCGGTGCGCATCGGCAACGCGGCGGCCGTGCAACTGCAGCTGGACGTGTACGGCGAGCTGATGGACGCGC
TCTACATCGCCCGCAAGGGCGGCCTGGACGGCGACGCGGCCTCCTGGCGCCTGCAGGTCGCGCTGATGACGCACCTCGAA
GCCGCCTGGCAGTCGCCCGACGAGGGGATCTGGGAGGTGCGCGGCCCGGCGCGGCATTTCACGCATTCCAAGGTGATGGC
GTGGGTCGCGTTCGACCGCGCGGTCAAGACCATCGAACAGTTCGGCCTGGACGGCCCGCTGGCCCGCTGGCGGGCCGTGC
GCGACCGCATCCACGACGAGGTCTGCCGCCACGGCTACAGTGCCGAACGCGGCTGCTTCGTGCAGAGCTACGGCAGCCGC
GAAATGGATGCCGCCCTGCTGATGCTGCCGCTGGTCGGTTTCCTGCCTGCATCCGATCTGCGCATCCAGCGCACCGTGCG
CGCCATCGAAGACGACCTGCTGGCCGACGGCCTGGTGCGCCGCTATCGCACCGAAGCCGTGACGGATGGACTGCCCGCCG
GCGAAGGCGTGTTCCTCGCCTGCAGCTTCTGGTACGTCGACAACCTCGTGCTGCAGGGCCGCCACGACGAAGCCCGGGCG
CTGTTCGCCAAGCTGCTCGCGCTGCGCAACGACGTGGGCCTGCTGGCCGAGGAATACGATCCCGGCTCGGGCCGCATGCT
CGGCAACTTCCCGCAGGCGTTCTCGCATATCGCGCTGGTGAACTCGGCGCTGGCGCTGTGCGCGGCGGCCGATCACGTCG
GCCAGCGCACCGGCACCTGA

Upstream 100 bases:

>100_bases
CAGCTTGCGGGTGAGCCGCTCGGGATCGCGGCCGGCGTTGTATTCGAGAATGGCGCGGGTGCTATCGTGCATGAAGCGGG
TCTCTCTGGAGTGGAGTGAA

Downstream 100 bases:

>100_bases
AGCGCGCCCGCGCGCCCGGTAGAATAACGGCCATGACCGATCCGACCGCCTTCTTCCCGCCTTCCGGCAACGATGTCGAC
AGCGATGCCGGCAGTGCGCC

Product: hypothetical protein

Products: NA

Alternate protein names: Glycosyl Hydrolase; Glycosyl Hydrolase Family; Glycosy Hydrolase Family Protein; Glycoside Hydrolase Family; Glucoamylase; Glycoside Hydrolase Family Protein; Trehalose-Phosphatase; Glucoamylase-Like Glycosyl Hydrolase; Glycosyl Hydrolase Glucoamylase; Glucoamylase Or Related Glycosyl Hydrolase; Six-Hairpin Glycosidase-Like Protein; Trehalose-Phosphatase/Glycoside Hydrolase; Glucoamylase Or Related Glycosyl Hydrolase Protein; Hydrolase; Glycosyl Hydrolase Glycosyl Hydrolase Family; Glycosyl Hydrolase Protein; Trehalose-6-Phosphate Phophatase

Number of amino acids: Translated: 619; Mature: 618

Protein sequence:

>619_residues
MPSRIEDYALIGDCETAALVSRDGSIDWLCWPRFDSGACFAALLGTPDHGRWRIAPQGPIRAVRRRYLPGTLILETVFET
DTGTASLTDLMPSRLPGTPSAREDTSDLVRIVRGLSGTVAMRMDLTLRFDYGASVPWVSRVTEETGAVSDDPCEMPGCVL
RAIAGPDMVVLRTPAQVRGENLSTVAEFAVAAGEAMPFVLTHSPSHRPLPASIDAIEAQRDTEPRWRAWSGRCRGAGEWA
EAIERSLITLKALTYHPTGGLVAAPTTSLPEQPGGVRNWDYRYCWLRDATLTLLALMNAGYYSEARAWRAWLERAVAGSP
AQIQIMYGIAGERRLGEWTVPWLPGYEGAQPVRIGNAAAVQLQLDVYGELMDALYIARKGGLDGDAASWRLQVALMTHLE
AAWQSPDEGIWEVRGPARHFTHSKVMAWVAFDRAVKTIEQFGLDGPLARWRAVRDRIHDEVCRHGYSAERGCFVQSYGSR
EMDAALLMLPLVGFLPASDLRIQRTVRAIEDDLLADGLVRRYRTEAVTDGLPAGEGVFLACSFWYVDNLVLQGRHDEARA
LFAKLLALRNDVGLLAEEYDPGSGRMLGNFPQAFSHIALVNSALALCAAADHVGQRTGT

Sequences:

>Translated_619_residues
MPSRIEDYALIGDCETAALVSRDGSIDWLCWPRFDSGACFAALLGTPDHGRWRIAPQGPIRAVRRRYLPGTLILETVFET
DTGTASLTDLMPSRLPGTPSAREDTSDLVRIVRGLSGTVAMRMDLTLRFDYGASVPWVSRVTEETGAVSDDPCEMPGCVL
RAIAGPDMVVLRTPAQVRGENLSTVAEFAVAAGEAMPFVLTHSPSHRPLPASIDAIEAQRDTEPRWRAWSGRCRGAGEWA
EAIERSLITLKALTYHPTGGLVAAPTTSLPEQPGGVRNWDYRYCWLRDATLTLLALMNAGYYSEARAWRAWLERAVAGSP
AQIQIMYGIAGERRLGEWTVPWLPGYEGAQPVRIGNAAAVQLQLDVYGELMDALYIARKGGLDGDAASWRLQVALMTHLE
AAWQSPDEGIWEVRGPARHFTHSKVMAWVAFDRAVKTIEQFGLDGPLARWRAVRDRIHDEVCRHGYSAERGCFVQSYGSR
EMDAALLMLPLVGFLPASDLRIQRTVRAIEDDLLADGLVRRYRTEAVTDGLPAGEGVFLACSFWYVDNLVLQGRHDEARA
LFAKLLALRNDVGLLAEEYDPGSGRMLGNFPQAFSHIALVNSALALCAAADHVGQRTGT
>Mature_618_residues
PSRIEDYALIGDCETAALVSRDGSIDWLCWPRFDSGACFAALLGTPDHGRWRIAPQGPIRAVRRRYLPGTLILETVFETD
TGTASLTDLMPSRLPGTPSAREDTSDLVRIVRGLSGTVAMRMDLTLRFDYGASVPWVSRVTEETGAVSDDPCEMPGCVLR
AIAGPDMVVLRTPAQVRGENLSTVAEFAVAAGEAMPFVLTHSPSHRPLPASIDAIEAQRDTEPRWRAWSGRCRGAGEWAE
AIERSLITLKALTYHPTGGLVAAPTTSLPEQPGGVRNWDYRYCWLRDATLTLLALMNAGYYSEARAWRAWLERAVAGSPA
QIQIMYGIAGERRLGEWTVPWLPGYEGAQPVRIGNAAAVQLQLDVYGELMDALYIARKGGLDGDAASWRLQVALMTHLEA
AWQSPDEGIWEVRGPARHFTHSKVMAWVAFDRAVKTIEQFGLDGPLARWRAVRDRIHDEVCRHGYSAERGCFVQSYGSRE
MDAALLMLPLVGFLPASDLRIQRTVRAIEDDLLADGLVRRYRTEAVTDGLPAGEGVFLACSFWYVDNLVLQGRHDEARAL
FAKLLALRNDVGLLAEEYDPGSGRMLGNFPQAFSHIALVNSALALCAAADHVGQRTGT

Specific function: Unknown

COG id: COG3387

COG function: function code G; Glucoamylase and related glycosyl hydrolases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 67972; Mature: 67841

Theoretical pI: Translated: 5.68; Mature: 5.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSRIEDYALIGDCETAALVSRDGSIDWLCWPRFDSGACFAALLGTPDHGRWRIAPQGPI
CCCCCCCEEEECCCCHHHHEECCCCEEEEEECCCCCCCEEEEEECCCCCCEEEECCCCHH
RAVRRRYLPGTLILETVFETDTGTASLTDLMPSRLPGTPSAREDTSDLVRIVRGLSGTVA
HHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCEE
MRMDLTLRFDYGASVPWVSRVTEETGAVSDDPCEMPGCVLRAIAGPDMVVLRTPAQVRGE
EEEEEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCEEEEECCHHHCCC
NLSTVAEFAVAAGEAMPFVLTHSPSHRPLPASIDAIEAQRDTEPRWRAWSGRCRGAGEWA
CHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHCCCCCCCHHCCCCCCCCCCHHH
EAIERSLITLKALTYHPTGGLVAAPTTSLPEQPGGVRNWDYRYCWLRDATLTLLALMNAG
HHHHHHHHEEEEEEECCCCCEEECCCCCCCCCCCCCCCCCEEEEEEEHHHHHHHHHHCCC
YYSEARAWRAWLERAVAGSPAQIQIMYGIAGERRLGEWTVPWLPGYEGAQPVRIGNAAAV
CHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEECCCEEE
QLQLDVYGELMDALYIARKGGLDGDAASWRLQVALMTHLEAAWQSPDEGIWEVRGPARHF
EEEHHHHHHHHHHHHHHHCCCCCCCCCCCEEEHHHHHHHHHHHCCCCCCCEECCCCHHHH
THSKVMAWVAFDRAVKTIEQFGLDGPLARWRAVRDRIHDEVCRHGYSAERGCFVQSYGSR
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCC
EMDAALLMLPLVGFLPASDLRIQRTVRAIEDDLLADGLVRRYRTEAVTDGLPAGEGVFLA
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEE
CSFWYVDNLVLQGRHDEARALFAKLLALRNDVGLLAEEYDPGSGRMLGNFPQAFSHIALV
EEHHHHCCCCEECCCHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCHHHHHHHHHHH
NSALALCAAADHVGQRTGT
HHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
PSRIEDYALIGDCETAALVSRDGSIDWLCWPRFDSGACFAALLGTPDHGRWRIAPQGPI
CCCCCCEEEECCCCHHHHEECCCCEEEEEECCCCCCCEEEEEECCCCCCEEEECCCCHH
RAVRRRYLPGTLILETVFETDTGTASLTDLMPSRLPGTPSAREDTSDLVRIVRGLSGTVA
HHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCEE
MRMDLTLRFDYGASVPWVSRVTEETGAVSDDPCEMPGCVLRAIAGPDMVVLRTPAQVRGE
EEEEEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCEEEEECCHHHCCC
NLSTVAEFAVAAGEAMPFVLTHSPSHRPLPASIDAIEAQRDTEPRWRAWSGRCRGAGEWA
CHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHCCCCCCCHHCCCCCCCCCCHHH
EAIERSLITLKALTYHPTGGLVAAPTTSLPEQPGGVRNWDYRYCWLRDATLTLLALMNAG
HHHHHHHHEEEEEEECCCCCEEECCCCCCCCCCCCCCCCCEEEEEEEHHHHHHHHHHCCC
YYSEARAWRAWLERAVAGSPAQIQIMYGIAGERRLGEWTVPWLPGYEGAQPVRIGNAAAV
CHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEECCCEEE
QLQLDVYGELMDALYIARKGGLDGDAASWRLQVALMTHLEAAWQSPDEGIWEVRGPARHF
EEEHHHHHHHHHHHHHHHCCCCCCCCCCCEEEHHHHHHHHHHHCCCCCCCEECCCCHHHH
THSKVMAWVAFDRAVKTIEQFGLDGPLARWRAVRDRIHDEVCRHGYSAERGCFVQSYGSR
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCC
EMDAALLMLPLVGFLPASDLRIQRTVRAIEDDLLADGLVRRYRTEAVTDGLPAGEGVFLA
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEE
CSFWYVDNLVLQGRHDEARALFAKLLALRNDVGLLAEEYDPGSGRMLGNFPQAFSHIALV
EEHHHHCCCCEECCCHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCHHHHHHHHHHH
NSALALCAAADHVGQRTGT
HHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA