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The map label for this gene is tISRso12a

Identifier: 17546157

GI number: 17546157

Start: 1541818

End: 1542084

Strand: Direct

Name: tISRso12a

Synonym: RSc1438

Alternate gene names: NA

Gene position: 1541818-1542084 (Clockwise)

Preceding gene: 17546154

Following gene: 17546158

Centisome position: 41.49

GC content: 55.06

Gene sequence:

>267_bases
ATGAAGAAGTCGAAGTTCACGGAAGAGCAGATTGCGTTCGCGCTGCATCAGGCCGAGACAGGTGTCTCGGTCGAAGAGGT
ATGCCGCAAGATTGGCATCTCGCAAGCGACGTTTTACGCGTGGAAGAAGAAGTACGGCGGTATTGGCGTGAGCGAGCTAC
GGCGGTTGCGTCAACTTGAAGAGGAGAACGCCAAGCTGCGGCGCTTGGTGGCCGACTTGAGCCTGGACAAGGTCATGCTG
CAGGATGTTCTGAGAAAAAAGCTCTAA

Upstream 100 bases:

>100_bases
AGAGGGTGGTGTCCAGTCGATGCTGACCTCCCCCCGAAATATTGGACACGCCAGAACAGGAGAAAACCGGCGACACTGCC
CTTGAAGGAGGGAGTTCGCC

Downstream 100 bases:

>100_bases
GGCCGGCGCAGCGCAAAGCGCTCGTCGGCCATCTCATCGAACGGTACCGCGTCAGCATTAAACGCGCCTGCCAGGTCTGC
CGGCAAAGCCGCGCAGGTTG

Product: isrso12-transposase orfa protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 88; Mature: 88

Protein sequence:

>88_residues
MKKSKFTEEQIAFALHQAETGVSVEEVCRKIGISQATFYAWKKKYGGIGVSELRRLRQLEEENAKLRRLVADLSLDKVML
QDVLRKKL

Sequences:

>Translated_88_residues
MKKSKFTEEQIAFALHQAETGVSVEEVCRKIGISQATFYAWKKKYGGIGVSELRRLRQLEEENAKLRRLVADLSLDKVML
QDVLRKKL
>Mature_88_residues
MKKSKFTEEQIAFALHQAETGVSVEEVCRKIGISQATFYAWKKKYGGIGVSELRRLRQLEEENAKLRRLVADLSLDKVML
QDVLRKKL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 8 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR002514 [H]

Pfam domain/function: PF01527 Transposase_8 [H]

EC number: NA

Molecular weight: Translated: 10153; Mature: 10153

Theoretical pI: Translated: 10.32; Mature: 10.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKSKFTEEQIAFALHQAETGVSVEEVCRKIGISQATFYAWKKKYGGIGVSELRRLRQLE
CCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHH
EENAKLRRLVADLSLDKVMLQDVLRKKL
HHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKKSKFTEEQIAFALHQAETGVSVEEVCRKIGISQATFYAWKKKYGGIGVSELRRLRQLE
CCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHH
EENAKLRRLVADLSLDKVMLQDVLRKKL
HHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2544911 [H]