| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is 17546149
Identifier: 17546149
GI number: 17546149
Start: 1529630
End: 1530208
Strand: Direct
Name: 17546149
Synonym: RSc1430
Alternate gene names: NA
Gene position: 1529630-1530208 (Clockwise)
Preceding gene: 17546148
Following gene: 17546150
Centisome position: 41.16
GC content: 68.05
Gene sequence:
>579_bases ATGATGAAAGCGCTTTTGCGACTCGTTCTGTTTCTGGATGCGGCTGTCGCGCTGTGCGTCGGTCTCGTCCTGCTGGCGTC CCCGCTGTCGTCCGTCTTCGGCGCGCTGCAGGTGCCGCAGCCGGATCCGGCGATGTACGGCCAGTTGCTCGGCGTGACGC TGCTCGGCCTGGCCTGGTTGCTGTGGCACGCCACCGTCAATGGGCAGTTGACCACCGCCGTGGCACAGGTGGTCGGCCAT GTGAACCTGGCGGTGGCCGTGCTGGTGATCGCCTGGCTGCTGTTCTTCCATCTGCCGGTGGACGGCGCGGGCCGCATCTG GCTGCCGACCTTTGCCGCCGTGCTGGCGCTGTTTGCCGCCGTGCAGATTCCGGCCTCGCGCCGCGTGCGCCACACCGAGC GCGAACGGGCCACGAAGGCCCGCGAAGAGGCGGCCGCCACGCGTGAACGCGAACGCGCGGGCGCCGAGCGCAAGGAACCC GCCTATATGCCGCCGCCGGGCTACGGCCCCGGCACCGAAGTCGACACGATTGCCGATTCTCTCCCTCCACAACATGCACG ACAAAGTCCTCATCCTTGA
Upstream 100 bases:
>100_bases CGCGATAGAAGGCACGCAGTATTGGCGCCGGGGCGCGGACGCTCCGGCGGCGTTCAATCCGGTGGCCGGCGCGCGGGGCG GCCACCCGCAACTGGAGACG
Downstream 100 bases:
>100_bases TTTCGGCTCGCAGGTCACGCAGCTGATCGCGCGGCGTGTCCGCGAAGCGCACGTCTACTGCGAGATCCATCCGAACGACG TGTCCGACGCCTTCGTGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 192; Mature: 192
Protein sequence:
>192_residues MMKALLRLVLFLDAAVALCVGLVLLASPLSSVFGALQVPQPDPAMYGQLLGVTLLGLAWLLWHATVNGQLTTAVAQVVGH VNLAVAVLVIAWLLFFHLPVDGAGRIWLPTFAAVLALFAAVQIPASRRVRHTERERATKAREEAAATRERERAGAERKEP AYMPPPGYGPGTEVDTIADSLPPQHARQSPHP
Sequences:
>Translated_192_residues MMKALLRLVLFLDAAVALCVGLVLLASPLSSVFGALQVPQPDPAMYGQLLGVTLLGLAWLLWHATVNGQLTTAVAQVVGH VNLAVAVLVIAWLLFFHLPVDGAGRIWLPTFAAVLALFAAVQIPASRRVRHTERERATKAREEAAATRERERAGAERKEP AYMPPPGYGPGTEVDTIADSLPPQHARQSPHP >Mature_192_residues MMKALLRLVLFLDAAVALCVGLVLLASPLSSVFGALQVPQPDPAMYGQLLGVTLLGLAWLLWHATVNGQLTTAVAQVVGH VNLAVAVLVIAWLLFFHLPVDGAGRIWLPTFAAVLALFAAVQIPASRRVRHTERERATKAREEAAATRERERAGAERKEP AYMPPPGYGPGTEVDTIADSLPPQHARQSPHP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20628; Mature: 20628
Theoretical pI: Translated: 9.18; Mature: 9.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMKALLRLVLFLDAAVALCVGLVLLASPLSSVFGALQVPQPDPAMYGQLLGVTLLGLAWL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH LWHATVNGQLTTAVAQVVGHVNLAVAVLVIAWLLFFHLPVDGAGRIWLPTFAAVLALFAA HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH VQIPASRRVRHTERERATKAREEAAATRERERAGAERKEPAYMPPPGYGPGTEVDTIADS HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHC LPPQHARQSPHP CCCHHCCCCCCC >Mature Secondary Structure MMKALLRLVLFLDAAVALCVGLVLLASPLSSVFGALQVPQPDPAMYGQLLGVTLLGLAWL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH LWHATVNGQLTTAVAQVVGHVNLAVAVLVIAWLLFFHLPVDGAGRIWLPTFAAVLALFAA HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH VQIPASRRVRHTERERATKAREEAAATRERERAGAERKEPAYMPPPGYGPGTEVDTIADS HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHC LPPQHARQSPHP CCCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA