| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is guaB [H]
Identifier: 17546148
GI number: 17546148
Start: 1528044
End: 1529507
Strand: Direct
Name: guaB [H]
Synonym: RSc1429
Alternate gene names: 17546148
Gene position: 1528044-1529507 (Clockwise)
Preceding gene: 17546145
Following gene: 17546149
Centisome position: 41.12
GC content: 66.94
Gene sequence:
>1464_bases ATGCGTCTTGTCCAGAAAGCACTCACGTTCGATGATGTGCTGCTCGTCCCGGCCTACTCGGCCGTTCTTCCCCGCGATAC GTCGCTTCGCACCAAACTCACCCGCACGATCGAGCTCGCCATTCCGCTGGTGTCCGCCGCCATGGACACCGTCACGGAAG CGCGCCTGGCCATCGCCATGGCGCAGCAGGGCGGCATCGGCATCGTTCACAAGAACCTGAAGCCGGAAGAGCAGGCGCGC GAAGTCGCCAAGGTCAAGCGCTTCGAGTCGGGCGTGCTGCGCGACCCGATCACCATCGGCCCGGACATGAAGGTCCGTGA CGTGATGGCGCTGTCGGCGCAGCATGGCATCTCGGGCTTCCCGGTGCTGGAAGGCAACAAGGTGGTGGGCATCATCACCA ACCGCGACCTGCGCTTCGAAGAAGAGCTGGACGCGCCGGTGCGCGCCAAGATGACGCCGGGCGAGAAGCTCGTCACCGTC AGGGAAGGCGCCTCGCTGGAAGAGGCCAAGCGCCTGATGAACAAGCACCGCCTGGAGCGCGTGCTGGTGGTCGACGGCAA TTTCGAGCTGCGCGGCCTCATCACCGTCAAGGACATCCAGAAGGCCACCGAGCATCCGCTGGCCTCCAAGGACGAGCGCG GCTCGCTGCGCGTCGGCGCGGCGGTGGGCGTGGGCCCGGACAATGACCTGCGCGTCGACCTGCTGGTCAAGGCCGGCGTG GACGTGATCGTGGTCGATACCGCGCACGGCCACAGCCAGGGCGTGCTGAGCCGCGTGCGCTGGATCAAGGACAAATACCC GCAGGTGCAGGTGATCGGCGGCAACATCGCCACGGCCGAAGCCGCGAAGGCGCTGGTCGACCACGGCGCGGACGGCGTCA AGGTCGGCATCGGCCCGGGCTCGATCTGCACGACGCGGATTGTAGCCGGCGTGGGCGTGCCGCAGATCAGCGCGGTGTCC AACGTGGCCGAGGCGCTCAAGAACACCGGCGTGCCCCTGGTGGCCGACGGCGGCGTGCGCTACTCGGGCGACATCGCCAA GGCACTGGCGGCTGGCGCGCACACCGTGATGATGGGCGGCATGTTCGCCGGCACCGAAGAGGCGCCGGGCGAGGTGTTCC TGTACCAGGGACGCTCGTACAAGAGCTACCGCGGTATGGGTTCGGTGGGCGCCATGAAGGACGGCGCGGCCGACCGCTAC TTCCAGGAAGACAACACCGCCAACGTCGATAAGCTGGTGCCGGAAGGCATCGAGGGCCGCGTCCCATACAAGGGCTCGGT GCTGCCGATCGTCCATCAGCTCACCGGCGGCATCCGCTCGTCGATGGGCTACTGCGGCTGCGCGTCGATCGCCGAATGGC ACGAGAAGAGCCAGTTCGTCCAGATCACCGCCGCCGGCATGCGCGAATCGCACGTGCACGACGTGCAGATCACGAAGGAA GCGCCGAACTATCACCTCGACTGA
Upstream 100 bases:
>100_bases TGCGCCGGTGTGCGAAGAAAAATTTATCAAGCATAGCATGGTCATAACCAAACGTGGCGAGATTCCCGTATAATCCGATT TTGCGCCTAGAGGATTCGCT
Downstream 100 bases:
>100_bases CCGGCGCTCCGGTCATCGCACCCGCGATAGAAGGCACGCAGTATTGGCGCCGGGGCGCGGACGCTCCGGCGGCGTTCAAT CCGGTGGCCGGCGCGCGGGG
Product: inosine 5'-monophosphate dehydrogenase
Products: NA
Alternate protein names: IMP dehydrogenase; IMPD; IMPDH [H]
Number of amino acids: Translated: 487; Mature: 487
Protein sequence:
>487_residues MRLVQKALTFDDVLLVPAYSAVLPRDTSLRTKLTRTIELAIPLVSAAMDTVTEARLAIAMAQQGGIGIVHKNLKPEEQAR EVAKVKRFESGVLRDPITIGPDMKVRDVMALSAQHGISGFPVLEGNKVVGIITNRDLRFEEELDAPVRAKMTPGEKLVTV REGASLEEAKRLMNKHRLERVLVVDGNFELRGLITVKDIQKATEHPLASKDERGSLRVGAAVGVGPDNDLRVDLLVKAGV DVIVVDTAHGHSQGVLSRVRWIKDKYPQVQVIGGNIATAEAAKALVDHGADGVKVGIGPGSICTTRIVAGVGVPQISAVS NVAEALKNTGVPLVADGGVRYSGDIAKALAAGAHTVMMGGMFAGTEEAPGEVFLYQGRSYKSYRGMGSVGAMKDGAADRY FQEDNTANVDKLVPEGIEGRVPYKGSVLPIVHQLTGGIRSSMGYCGCASIAEWHEKSQFVQITAAGMRESHVHDVQITKE APNYHLD
Sequences:
>Translated_487_residues MRLVQKALTFDDVLLVPAYSAVLPRDTSLRTKLTRTIELAIPLVSAAMDTVTEARLAIAMAQQGGIGIVHKNLKPEEQAR EVAKVKRFESGVLRDPITIGPDMKVRDVMALSAQHGISGFPVLEGNKVVGIITNRDLRFEEELDAPVRAKMTPGEKLVTV REGASLEEAKRLMNKHRLERVLVVDGNFELRGLITVKDIQKATEHPLASKDERGSLRVGAAVGVGPDNDLRVDLLVKAGV DVIVVDTAHGHSQGVLSRVRWIKDKYPQVQVIGGNIATAEAAKALVDHGADGVKVGIGPGSICTTRIVAGVGVPQISAVS NVAEALKNTGVPLVADGGVRYSGDIAKALAAGAHTVMMGGMFAGTEEAPGEVFLYQGRSYKSYRGMGSVGAMKDGAADRY FQEDNTANVDKLVPEGIEGRVPYKGSVLPIVHQLTGGIRSSMGYCGCASIAEWHEKSQFVQITAAGMRESHVHDVQITKE APNYHLD >Mature_487_residues MRLVQKALTFDDVLLVPAYSAVLPRDTSLRTKLTRTIELAIPLVSAAMDTVTEARLAIAMAQQGGIGIVHKNLKPEEQAR EVAKVKRFESGVLRDPITIGPDMKVRDVMALSAQHGISGFPVLEGNKVVGIITNRDLRFEEELDAPVRAKMTPGEKLVTV REGASLEEAKRLMNKHRLERVLVVDGNFELRGLITVKDIQKATEHPLASKDERGSLRVGAAVGVGPDNDLRVDLLVKAGV DVIVVDTAHGHSQGVLSRVRWIKDKYPQVQVIGGNIATAEAAKALVDHGADGVKVGIGPGSICTTRIVAGVGVPQISAVS NVAEALKNTGVPLVADGGVRYSGDIAKALAAGAHTVMMGGMFAGTEEAPGEVFLYQGRSYKSYRGMGSVGAMKDGAADRY FQEDNTANVDKLVPEGIEGRVPYKGSVLPIVHQLTGGIRSSMGYCGCASIAEWHEKSQFVQITAAGMRESHVHDVQITKE APNYHLD
Specific function: GMP biosynthesis from IMP; first step. [C]
COG id: COG0516
COG function: function code F; IMP dehydrogenase/GMP reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 CBS domains [H]
Homologues:
Organism=Homo sapiens, GI66933016, Length=483, Percent_Identity=43.064182194617, Blast_Score=377, Evalue=1e-104, Organism=Homo sapiens, GI217035146, Length=451, Percent_Identity=44.3458980044346, Blast_Score=367, Evalue=1e-101, Organism=Homo sapiens, GI34328928, Length=451, Percent_Identity=44.3458980044346, Blast_Score=366, Evalue=1e-101, Organism=Homo sapiens, GI34328930, Length=451, Percent_Identity=44.3458980044346, Blast_Score=365, Evalue=1e-101, Organism=Homo sapiens, GI156616279, Length=451, Percent_Identity=44.3458980044346, Blast_Score=365, Evalue=1e-101, Organism=Homo sapiens, GI217035152, Length=447, Percent_Identity=44.2953020134228, Blast_Score=360, Evalue=2e-99, Organism=Homo sapiens, GI217035148, Length=451, Percent_Identity=43.4589800443459, Blast_Score=355, Evalue=5e-98, Organism=Homo sapiens, GI217035150, Length=451, Percent_Identity=41.019955654102, Blast_Score=324, Evalue=9e-89, Organism=Homo sapiens, GI156104880, Length=264, Percent_Identity=35.9848484848485, Blast_Score=164, Evalue=2e-40, Organism=Homo sapiens, GI50541956, Length=248, Percent_Identity=37.0967741935484, Blast_Score=162, Evalue=7e-40, Organism=Homo sapiens, GI50541954, Length=248, Percent_Identity=37.0967741935484, Blast_Score=162, Evalue=7e-40, Organism=Homo sapiens, GI50541952, Length=248, Percent_Identity=37.0967741935484, Blast_Score=162, Evalue=7e-40, Organism=Homo sapiens, GI50541948, Length=248, Percent_Identity=37.0967741935484, Blast_Score=162, Evalue=7e-40, Organism=Escherichia coli, GI1788855, Length=487, Percent_Identity=62.0123203285421, Blast_Score=572, Evalue=1e-164, Organism=Escherichia coli, GI1786293, Length=225, Percent_Identity=36, Blast_Score=145, Evalue=6e-36, Organism=Caenorhabditis elegans, GI71994385, Length=475, Percent_Identity=39.1578947368421, Blast_Score=315, Evalue=2e-86, Organism=Caenorhabditis elegans, GI71994389, Length=419, Percent_Identity=41.0501193317422, Blast_Score=303, Evalue=1e-82, Organism=Caenorhabditis elegans, GI17560440, Length=280, Percent_Identity=34.6428571428571, Blast_Score=160, Evalue=1e-39, Organism=Saccharomyces cerevisiae, GI6323585, Length=485, Percent_Identity=41.0309278350515, Blast_Score=353, Evalue=4e-98, Organism=Saccharomyces cerevisiae, GI6322012, Length=489, Percent_Identity=40.2862985685072, Blast_Score=350, Evalue=3e-97, Organism=Saccharomyces cerevisiae, GI6323464, Length=485, Percent_Identity=40.4123711340206, Blast_Score=339, Evalue=5e-94, Organism=Saccharomyces cerevisiae, GI6319352, Length=342, Percent_Identity=40.3508771929825, Blast_Score=257, Evalue=3e-69, Organism=Saccharomyces cerevisiae, GI6319353, Length=120, Percent_Identity=41.6666666666667, Blast_Score=87, Evalue=7e-18, Organism=Drosophila melanogaster, GI24641071, Length=483, Percent_Identity=40.5797101449275, Blast_Score=347, Evalue=1e-95, Organism=Drosophila melanogaster, GI24641073, Length=483, Percent_Identity=40.5797101449275, Blast_Score=347, Evalue=1e-95, Organism=Drosophila melanogaster, GI28571163, Length=441, Percent_Identity=41.2698412698413, Blast_Score=316, Evalue=2e-86,
Paralogues:
None
Copy number: 600 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR000644 - InterPro: IPR005990 - InterPro: IPR018529 - InterPro: IPR015875 - InterPro: IPR001093 [H]
Pfam domain/function: PF00571 CBS; PF00478 IMPDH [H]
EC number: =1.1.1.205 [H]
Molecular weight: Translated: 52066; Mature: 52066
Theoretical pI: Translated: 7.77; Mature: 7.77
Prosite motif: PS00487 IMP_DH_GMP_RED
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLVQKALTFDDVLLVPAYSAVLPRDTSLRTKLTRTIELAIPLVSAAMDTVTEARLAIAM CCHHHHHCCCCCEEEECCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE AQQGGIGIVHKNLKPEEQAREVAKVKRFESGVLRDPITIGPDMKVRDVMALSAQHGISGF CCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCEECCCCCCHHHHHHHHHHCCCCCC PVLEGNKVVGIITNRDLRFEEELDAPVRAKMTPGEKLVTVREGASLEEAKRLMNKHRLER EEECCCEEEEEEECCCCCCHHHCCCCCEEECCCCCEEEEEECCCCHHHHHHHHHHHCCCE VLVVDGNFELRGLITVKDIQKATEHPLASKDERGSLRVGAAVGVGPDNDLRVDLLVKAGV EEEEECCEEEEEEEEHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCCCEEEEEEECCC DVIVVDTAHGHSQGVLSRVRWIKDKYPQVQVIGGNIATAEAAKALVDHGADGVKVGIGPG CEEEEECCCCCHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHCCCCCEEEECCCC SICTTRIVAGVGVPQISAVSNVAEALKNTGVPLVADGGVRYSGDIAKALAAGAHTVMMGG CHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEECCCEEECCHHHHHHHCCCCEEEECC MFAGTEEAPGEVFLYQGRSYKSYRGMGSVGAMKDGAADRYFQEDNTANVDKLVPEGIEGR EECCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCHHHHCCCCCCCC VPYKGSVLPIVHQLTGGIRSSMGYCGCASIAEWHEKSQFVQITAAGMRESHVHDVQITKE CCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCEEEEEECCCCCCCCEEEEEEEC APNYHLD CCCCCCC >Mature Secondary Structure MRLVQKALTFDDVLLVPAYSAVLPRDTSLRTKLTRTIELAIPLVSAAMDTVTEARLAIAM CCHHHHHCCCCCEEEECCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE AQQGGIGIVHKNLKPEEQAREVAKVKRFESGVLRDPITIGPDMKVRDVMALSAQHGISGF CCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCEECCCCCCHHHHHHHHHHCCCCCC PVLEGNKVVGIITNRDLRFEEELDAPVRAKMTPGEKLVTVREGASLEEAKRLMNKHRLER EEECCCEEEEEEECCCCCCHHHCCCCCEEECCCCCEEEEEECCCCHHHHHHHHHHHCCCE VLVVDGNFELRGLITVKDIQKATEHPLASKDERGSLRVGAAVGVGPDNDLRVDLLVKAGV EEEEECCEEEEEEEEHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCCCEEEEEEECCC DVIVVDTAHGHSQGVLSRVRWIKDKYPQVQVIGGNIATAEAAKALVDHGADGVKVGIGPG CEEEEECCCCCHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHCCCCCEEEECCCC SICTTRIVAGVGVPQISAVSNVAEALKNTGVPLVADGGVRYSGDIAKALAAGAHTVMMGG CHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEECCCEEECCHHHHHHHCCCCEEEECC MFAGTEEAPGEVFLYQGRSYKSYRGMGSVGAMKDGAADRYFQEDNTANVDKLVPEGIEGR EECCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCHHHHCCCCCCCC VPYKGSVLPIVHQLTGGIRSSMGYCGCASIAEWHEKSQFVQITAAGMRESHVHDVQITKE CCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCEEEEEECCCCCCCCEEEEEEEC APNYHLD CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA