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The map label for this gene is yfjF [C]

Identifier: 17546145

GI number: 17546145

Start: 1525918

End: 1526274

Strand: Direct

Name: yfjF [C]

Synonym: RSc1426

Alternate gene names: 17546145

Gene position: 1525918-1526274 (Clockwise)

Preceding gene: 17546144

Following gene: 17546148

Centisome position: 41.06

GC content: 73.11

Gene sequence:

>357_bases
ATGGCGAATCCTGAGCGGATCGACGTGATGGTGTGCCTGGCGACGGTCACGCCGCCGAAACTGGTGCAGGTGCAGGTGAG
CGCCACGGCGACGGTGGCCGACGCCGTGCGCGCGTCCGGCTTGCTGGAGGAGGTGGGCCTGTCGATCGACGCCTGCAGGC
TGGGCGTCTACGGCAAGCGCAAGGCGCCCGATGCGCTGCTGCACGCGCACGACCGGGTGGAGATCACCGGCCCGCTGATC
GCCGACCCGAAGGCCGCGCGCCGGCGCCGCGTGCGGCGCGTGCGCGCGACGGGCACTCGCGAGGGGTTGAAGTGGCTGCG
CAACGAGGCGCCGCCGGAAGACGACGTGGCCGGCTAG

Upstream 100 bases:

>100_bases
GAGTTTTCCAGCGTCATCCTGGAAAAGCTGATCGGCCCGGTGTTCAGCATGATCGCCAACACCTTCGTCGATTCCTTCGT
CAAGCGCGCCGAGGCTGTCT

Downstream 100 bases:

>100_bases
CGGCCCGGCCTCAGCTGCAGTTCGCGCTCAGATCGGTCTGATTGCGTTGGATGGCGGCGGCGCGCTGAGCGTCATCCATA
TAGGAGAGCGTGCCGTCCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 118; Mature: 117

Protein sequence:

>118_residues
MANPERIDVMVCLATVTPPKLVQVQVSATATVADAVRASGLLEEVGLSIDACRLGVYGKRKAPDALLHAHDRVEITGPLI
ADPKAARRRRVRRVRATGTREGLKWLRNEAPPEDDVAG

Sequences:

>Translated_118_residues
MANPERIDVMVCLATVTPPKLVQVQVSATATVADAVRASGLLEEVGLSIDACRLGVYGKRKAPDALLHAHDRVEITGPLI
ADPKAARRRRVRRVRATGTREGLKWLRNEAPPEDDVAG
>Mature_117_residues
ANPERIDVMVCLATVTPPKLVQVQVSATATVADAVRASGLLEEVGLSIDACRLGVYGKRKAPDALLHAHDRVEITGPLIA
DPKAARRRRVRRVRATGTREGLKWLRNEAPPEDDVAG

Specific function: Unknown

COG id: COG2914

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0125 (rnfH) family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1426_RALSO (Q8XZG9)

Other databases:

- EMBL:   AL646052
- RefSeq:   NP_519547.1
- ProteinModelPortal:   Q8XZG9
- SMR:   Q8XZG9
- GeneID:   1220250
- GenomeReviews:   AL646052_GR
- KEGG:   rso:RSc1426
- NMPDR:   fig|267608.1.peg.1426
- HOGENOM:   HBG700644
- OMA:   ICYARED
- ProtClustDB:   CLSK2302540
- BioCyc:   RSOL267608:RSC1426-MONOMER
- HAMAP:   MF_00460
- InterPro:   IPR005346

Pfam domain/function: PF03658 UPF0125

EC number: NA

Molecular weight: Translated: 12743; Mature: 12612

Theoretical pI: Translated: 9.97; Mature: 9.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANPERIDVMVCLATVTPPKLVQVQVSATATVADAVRASGLLEEVGLSIDACRLGVYGKR
CCCCHHEEEEEEEECCCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCC
KAPDALLHAHDRVEITGPLIADPKAARRRRVRRVRATGTREGLKWLRNEAPPEDDVAG
CCCHHHHHCCCCEEECCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
ANPERIDVMVCLATVTPPKLVQVQVSATATVADAVRASGLLEEVGLSIDACRLGVYGKR
CCCHHEEEEEEEECCCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCC
KAPDALLHAHDRVEITGPLIADPKAARRRRVRRVRATGTREGLKWLRNEAPPEDDVAG
CCCHHHHHCCCCEEECCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11823852