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The map label for this gene is ydiA [C]

Identifier: 17546139

GI number: 17546139

Start: 1519945

End: 1520784

Strand: Reverse

Name: ydiA [C]

Synonym: RSc1420

Alternate gene names: 17546139

Gene position: 1520784-1519945 (Counterclockwise)

Preceding gene: 17546143

Following gene: 17546122

Centisome position: 40.92

GC content: 61.31

Gene sequence:

>840_bases
ATGACCGACCTCGCCGCCAAGCCGGGCATCCGCACTGTATTCATCGTGTCGGATGGCACCGGGATCACCGCAGAAACCTT
CAGCCACTCCATCCTGGCCCAGTTCGAGATGAAATTCCGCCAGGTGCGGATTCCGTTCGTGGACACCGTGGACAAAGCAC
ACGTGGCGGTCAGCAAGATCAACGAGGCGTTCCACGTGGAAGGGATGAAGCCGATCGTCTTCACCACGCTGGTCGATGCC
GAGGCCAACCGGATCGTGCACCAGGCCCGCGCGACCATCCTGGACATGTTCCAGACCTTCATCGAGCCGCTCGAGCGCGA
ACTGGGGCTGAAATCCTCCCACGCCATCGGCCGCTTCCACCAGAACGCCGACACCGAGGCGTACAAGAACCGCATCGAAG
CGATCAATTTTTCACTTGCGCACGACGACGGCCAGTCGCACAAGAACCTGGCCGAAGCGGATGTCATCCTGGTGGGGGTG
TCGCGCAGCGGCAAGACGCCGACCAGCCTCTACCTGGCAATGCAATACGGCGTGAAGTCGGCCAACTACCCGCTGATTCC
GGACGATTTCGAGCGCGGCAAGCTGCCCACGGTGCTGTACGAGTACAAGAGCAAGATCTTCGGGCTGACGATCGACCCGC
AGCGACTGTCCGAGATCCGCAACGAACGGCGCCCGGGCAGCAAATACGCCGCGCTGGAGAACTGCCGCTACGAAGTCAAC
GAGGCGGAGACGCTGATGCGCCGCGAGAGCATCAAGTGGCTCTCGTCCACGCACAAGTCGATCGAAGAAATCGCCACCAC
CATCCTGCAGGATATCAAGATGGAGCGCGACGCCTACTGA

Upstream 100 bases:

>100_bases
TGGCAGGCCGGCCCGAATTGCTTAGCAAAACGATCGCCGCTATTCTACCGTGCCGCCGCCCGATTTCCTGCCGGCGTGCC
GGAAAAAACCCCTCGTTTCG

Downstream 100 bases:

>100_bases
GCGTCATCCGCCCAAAGCAGCGAAAACGGCCGGCCTTGCACCGGCCGTTTTCATTGGCTTGCCGCGCGCCGCCGTCAGGC
CGGAGCGCACCCAGTTGCTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 279; Mature: 278

Protein sequence:

>279_residues
MTDLAAKPGIRTVFIVSDGTGITAETFSHSILAQFEMKFRQVRIPFVDTVDKAHVAVSKINEAFHVEGMKPIVFTTLVDA
EANRIVHQARATILDMFQTFIEPLERELGLKSSHAIGRFHQNADTEAYKNRIEAINFSLAHDDGQSHKNLAEADVILVGV
SRSGKTPTSLYLAMQYGVKSANYPLIPDDFERGKLPTVLYEYKSKIFGLTIDPQRLSEIRNERRPGSKYAALENCRYEVN
EAETLMRRESIKWLSSTHKSIEEIATTILQDIKMERDAY

Sequences:

>Translated_279_residues
MTDLAAKPGIRTVFIVSDGTGITAETFSHSILAQFEMKFRQVRIPFVDTVDKAHVAVSKINEAFHVEGMKPIVFTTLVDA
EANRIVHQARATILDMFQTFIEPLERELGLKSSHAIGRFHQNADTEAYKNRIEAINFSLAHDDGQSHKNLAEADVILVGV
SRSGKTPTSLYLAMQYGVKSANYPLIPDDFERGKLPTVLYEYKSKIFGLTIDPQRLSEIRNERRPGSKYAALENCRYEVN
EAETLMRRESIKWLSSTHKSIEEIATTILQDIKMERDAY
>Mature_278_residues
TDLAAKPGIRTVFIVSDGTGITAETFSHSILAQFEMKFRQVRIPFVDTVDKAHVAVSKINEAFHVEGMKPIVFTTLVDAE
ANRIVHQARATILDMFQTFIEPLERELGLKSSHAIGRFHQNADTEAYKNRIEAINFSLAHDDGQSHKNLAEADVILVGVS
RSGKTPTSLYLAMQYGVKSANYPLIPDDFERGKLPTVLYEYKSKIFGLTIDPQRLSEIRNERRPGSKYAALENCRYEVNE
AETLMRRESIKWLSSTHKSIEEIATTILQDIKMERDAY

Specific function: Unknown

COG id: COG1806

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pyruvate, phosphate dikinase regulatory protein family

Homologues:

Organism=Escherichia coli, GI1787995, Length=271, Percent_Identity=45.0184501845018, Blast_Score=251, Evalue=4e-68,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1420_RALSO (Q8XZH5)

Other databases:

- EMBL:   AL646052
- RefSeq:   NP_519541.1
- GeneID:   1220244
- GenomeReviews:   AL646052_GR
- KEGG:   rso:RSc1420
- NMPDR:   fig|267608.1.peg.1420
- HOGENOM:   HBG304855
- OMA:   DKAHVAV
- ProtClustDB:   PRK05339
- BioCyc:   RSOL267608:RSC1420-MONOMER
- HAMAP:   MF_01062
- InterPro:   IPR005177

Pfam domain/function: PF03618 DUF299

EC number: NA

Molecular weight: Translated: 31552; Mature: 31421

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDLAAKPGIRTVFIVSDGTGITAETFSHSILAQFEMKFRQVRIPFVDTVDKAHVAVSKI
CCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHEECCHHHCHHHHHHHHHHH
NEAFHVEGMKPIVFTTLVDAEANRIVHQARATILDMFQTFIEPLERELGLKSSHAIGRFH
HHHHCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
QNADTEAYKNRIEAINFSLAHDDGQSHKNLAEADVILVGVSRSGKTPTSLYLAMQYGVKS
CCCCHHHHHHHHHHHEEEEECCCCCCCCCHHCCCEEEEEECCCCCCCHHEEEEEECCCCC
ANYPLIPDDFERGKLPTVLYEYKSKIFGLTIDPQRLSEIRNERRPGSKYAALENCRYEVN
CCCCCCCCCCCCCCCCHHHHHHHHHHEEEEECHHHHHHHHHHCCCCCHHHHHHHCCCHHH
EAETLMRRESIKWLSSTHKSIEEIATTILQDIKMERDAY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TDLAAKPGIRTVFIVSDGTGITAETFSHSILAQFEMKFRQVRIPFVDTVDKAHVAVSKI
CCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHEECCHHHCHHHHHHHHHHH
NEAFHVEGMKPIVFTTLVDAEANRIVHQARATILDMFQTFIEPLERELGLKSSHAIGRFH
HHHHCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
QNADTEAYKNRIEAINFSLAHDDGQSHKNLAEADVILVGVSRSGKTPTSLYLAMQYGVKS
CCCCHHHHHHHHHHHEEEEECCCCCCCCCHHCCCEEEEEECCCCCCCHHEEEEEECCCCC
ANYPLIPDDFERGKLPTVLYEYKSKIFGLTIDPQRLSEIRNERRPGSKYAALENCRYEVN
CCCCCCCCCCCCCCCCHHHHHHHHHHEEEEECHHHHHHHHHHCCCCCHHHHHHHCCCHHH
EAETLMRRESIKWLSSTHKSIEEIATTILQDIKMERDAY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11823852