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The map label for this gene is glnD

Identifier: 17546121

GI number: 17546121

Start: 1499807

End: 1502392

Strand: Reverse

Name: glnD

Synonym: RSc1402

Alternate gene names: 17546121

Gene position: 1502392-1499807 (Counterclockwise)

Preceding gene: 17546122

Following gene: 17546120

Centisome position: 40.43

GC content: 67.94

Gene sequence:

>2586_bases
ATGCATACCGCTGCTGCCGCCACTCCCGCCACGTCTCCGCGCGACATCCTGAAGGCCGAGCGCGCGCACCTGTTCGCGCA
GTTCGAGCAGCACGCCAACGTCAACCTGCTGGTCACGAAGCTGGCGCGCGCCGTCGACCAGGCGCTCATCCTGCTCTGGC
AGGACGAGGGGATGCCCGACACCTGCGCCCTGGTCGCCGTGGGCGGCTACGGGCGCGGCGAGCTGTTCCCGCATTCCGAC
GTCGACATCCTGCTGCTGCTGCCGCAGACCGCGGACAAGGCCCTGGAGACACGGCTGGAAGCCTTCATCGGCCACTGCTG
GGACATGGGACTGGACATCGGCTCATCGGTGCGCACCGTCGACGAGTGCATCAGCGAGGCCACGCAGGATGTGACGGTGT
GCACGTCGCTGCTCGAGGCGCGCCTGCTGACCGGCGACGAAGGCCTCTACCGCACCTTCGAGACGCACTACCAGGGGCAC
CTCGATGCCGCCGATTTCTACCAGTCCAAGATGCTGGAGATGCGGCAGCGGCATGCCAAGTACCAGGACACGCCCTACTC
GCTCGAGCCCAACTGCAAGGAAAGCCCGGGCGGCCTGCGCGACCTGCAGGTGATCCTGTGGATGACGCGCGCGGCCGGCT
TCGGCTCGAGCTGGAACGAGCTGCTGGTCAACCAGTTGCTGACGCGCCGCGAAGCCAAGGAGCTGGCCGCCAACGAACGC
CTGCTCAAGACCATCCGGGCCCGCCTGCACCTGCTGGCCGGGCGCCGCCAGGACGTACTCGTGTTCGACCTGCAGACCCA
GCTGGGCGAGGCCTTCGGCTATCGCCCGAACGCGGCCAAGCGCACCAGCGAGCAGCTGATGCGCCGCTACTACTGGGCAG
CCAAAGCCGTCACGCAGCTCAACACCGTGGTGCTGCAGAACATCGAGGCCCGGCTGTTTCCGACCGAGCTGGGCATCACG
CGGACCATCAACGGGCGCTTTGTCGAGCGCCAGGGCATGCTGGAGATCGCCGATCCCGAGCTGTACCAGCGCGAGCCGGC
CGCCATCCTGGAAACCTTCCTGGTGTATGAACAGACGCGCGGCGTCAAGGGCCTGGCCGCCAACACGCTGCGCGCGCTCT
ACAACGCCCGCACGCAGATGGATGCCAGGTGGCGCCGCGATCCGGCCAACCGCGCGACGTTCCTGTCGATCCTGCAGCAG
CCGCAGGGCATCACGCATGCGCTGCGGCTGATGAACCAGACCAGCGTGCTGGGCCGCTACCTGGTCAACTTCCGACGCAT
CGTCGGGCAGATGCAGCACGACCTGTTCCACGTCTACACGGTCGACCAGCACATCCTGATGGTGGTGCGCAATGTCCGCC
GCTTCGCCATCGTCGAGCACGCGCACGAGTTCCCGTTCTGCAGCCAGCTGATGGCGAACTTCGACAAGCCCTGGGTGCTG
ACCGTGGCCGCGCTGTTCCACGACATCGCCAAGGGGCGCGGCGGCGACCACTCGGTGCTGGGCATGGCCGACGCGCGGCG
CTTCTGCAAGCAGCACGGCATCGCCAGCGAGGATGCCGACCTGATCGTCTGGCTGGTCGAGCACCACCTGACCATGAGCC
AGGTCGCGCAGAAGCAGGACCTGGGCGATCCCGAGGTCATCCGCCACTTCGCCGACCAGGTCGGCAGCGAGCGCTACCTG
AGCGCGCTGTACCTGCTGACGGTGGCCGATATCCGCGGCACCAGCCCGAAGGTGTGGAACGCCTGGAAAGCCAAGCTGCT
GGAAGACCTGTACCGGATAACGCTGCGCGTGCTGGGCGGCGCGACCACCGATCCGCACGCCGTGCTGGAGGGCCGCAAGG
AAGAAGCGCGCGTCCTGCTGCGCCTGGCCGCGATGGACCCGCATGCTCACGAGGCGCTGTGGGCCCAGCTGGACGTGGGC
GTGTTCCTGCGCCACGACGCACGCGACATTGCGTGGTTCACGCGGCATTTCTACAACCGCGTCGACACCACCCTCCCGAT
CGTGCGGGCGCGGATCTCGCCGGTGGGCGAAGGCCTGCAGGTGGCGGTGTATTCGCCCGACCGGCCCGACCTGTTCGCCC
GCATCTGCGGCTACTTCGAGCGCAAGGGGCTGACCATCCTCGATGCCAAGATCCACACCACCAAGCATGGCTACGCGCTC
GACACCTTCCAGGTGGCCGACCCCGGCTCCGGCCTGGTGGAGCCCGGGCACTACCGCGACATCATCACGCTGGTCGAGCA
CGAGCTGGCCGAGCTGATCGCGCGCGAGACCGTCCTGGCCGAGCCGCCGCGCGGACGCATCTCGCGCCAGTCGCGCAGCT
TCCCGATCAAGCCGCGCGTGGACCTGCGCCCGGACGAGCGCGGGCAGTATTACCTGCTGTCGCTGTCGGCCACCGACCGC
ACCGGGCTGCTGTACGCCATCGCCCGGGTGCTGGCGCGCCATCGTGTGTCGGTGCACACCGCGCGCATCAACACGCTGGG
CGAGCGGGTGGAAGACGTCTTCCTGCTCGACGGCCGCCGACTCACGCAGGACAACAAACTGCAGCTCGCGCTCGAAAGCG
AGCTGCTCGAGGCACTCGCTATCTGA

Upstream 100 bases:

>100_bases
GGCCGCTCGTCGCCCCAGGTGCGCCGCAGCGGTCGCGCCGGCCCATGTTTTTCCGCAACGACCGGACCGCTCCGGTCGTT
GTTCCATTGACGCTCAACGC

Downstream 100 bases:

>100_bases
GGCCTCGCCTGATGGATTTGACCCATGACTGATTCCGACGATTTCCCCGGCGACGACACCAAGCGCTCCGCCAGCGACCC
CACGCAGCGGGCCACCCGCC

Product: PII uridylyl-transferase

Products: NA

Alternate protein names: PII uridylyl-transferase; UTase; Uridylyl-removing enzyme

Number of amino acids: Translated: 861; Mature: 861

Protein sequence:

>861_residues
MHTAAAATPATSPRDILKAERAHLFAQFEQHANVNLLVTKLARAVDQALILLWQDEGMPDTCALVAVGGYGRGELFPHSD
VDILLLLPQTADKALETRLEAFIGHCWDMGLDIGSSVRTVDECISEATQDVTVCTSLLEARLLTGDEGLYRTFETHYQGH
LDAADFYQSKMLEMRQRHAKYQDTPYSLEPNCKESPGGLRDLQVILWMTRAAGFGSSWNELLVNQLLTRREAKELAANER
LLKTIRARLHLLAGRRQDVLVFDLQTQLGEAFGYRPNAAKRTSEQLMRRYYWAAKAVTQLNTVVLQNIEARLFPTELGIT
RTINGRFVERQGMLEIADPELYQREPAAILETFLVYEQTRGVKGLAANTLRALYNARTQMDARWRRDPANRATFLSILQQ
PQGITHALRLMNQTSVLGRYLVNFRRIVGQMQHDLFHVYTVDQHILMVVRNVRRFAIVEHAHEFPFCSQLMANFDKPWVL
TVAALFHDIAKGRGGDHSVLGMADARRFCKQHGIASEDADLIVWLVEHHLTMSQVAQKQDLGDPEVIRHFADQVGSERYL
SALYLLTVADIRGTSPKVWNAWKAKLLEDLYRITLRVLGGATTDPHAVLEGRKEEARVLLRLAAMDPHAHEALWAQLDVG
VFLRHDARDIAWFTRHFYNRVDTTLPIVRARISPVGEGLQVAVYSPDRPDLFARICGYFERKGLTILDAKIHTTKHGYAL
DTFQVADPGSGLVEPGHYRDIITLVEHELAELIARETVLAEPPRGRISRQSRSFPIKPRVDLRPDERGQYYLLSLSATDR
TGLLYAIARVLARHRVSVHTARINTLGERVEDVFLLDGRRLTQDNKLQLALESELLEALAI

Sequences:

>Translated_861_residues
MHTAAAATPATSPRDILKAERAHLFAQFEQHANVNLLVTKLARAVDQALILLWQDEGMPDTCALVAVGGYGRGELFPHSD
VDILLLLPQTADKALETRLEAFIGHCWDMGLDIGSSVRTVDECISEATQDVTVCTSLLEARLLTGDEGLYRTFETHYQGH
LDAADFYQSKMLEMRQRHAKYQDTPYSLEPNCKESPGGLRDLQVILWMTRAAGFGSSWNELLVNQLLTRREAKELAANER
LLKTIRARLHLLAGRRQDVLVFDLQTQLGEAFGYRPNAAKRTSEQLMRRYYWAAKAVTQLNTVVLQNIEARLFPTELGIT
RTINGRFVERQGMLEIADPELYQREPAAILETFLVYEQTRGVKGLAANTLRALYNARTQMDARWRRDPANRATFLSILQQ
PQGITHALRLMNQTSVLGRYLVNFRRIVGQMQHDLFHVYTVDQHILMVVRNVRRFAIVEHAHEFPFCSQLMANFDKPWVL
TVAALFHDIAKGRGGDHSVLGMADARRFCKQHGIASEDADLIVWLVEHHLTMSQVAQKQDLGDPEVIRHFADQVGSERYL
SALYLLTVADIRGTSPKVWNAWKAKLLEDLYRITLRVLGGATTDPHAVLEGRKEEARVLLRLAAMDPHAHEALWAQLDVG
VFLRHDARDIAWFTRHFYNRVDTTLPIVRARISPVGEGLQVAVYSPDRPDLFARICGYFERKGLTILDAKIHTTKHGYAL
DTFQVADPGSGLVEPGHYRDIITLVEHELAELIARETVLAEPPRGRISRQSRSFPIKPRVDLRPDERGQYYLLSLSATDR
TGLLYAIARVLARHRVSVHTARINTLGERVEDVFLLDGRRLTQDNKLQLALESELLEALAI
>Mature_861_residues
MHTAAAATPATSPRDILKAERAHLFAQFEQHANVNLLVTKLARAVDQALILLWQDEGMPDTCALVAVGGYGRGELFPHSD
VDILLLLPQTADKALETRLEAFIGHCWDMGLDIGSSVRTVDECISEATQDVTVCTSLLEARLLTGDEGLYRTFETHYQGH
LDAADFYQSKMLEMRQRHAKYQDTPYSLEPNCKESPGGLRDLQVILWMTRAAGFGSSWNELLVNQLLTRREAKELAANER
LLKTIRARLHLLAGRRQDVLVFDLQTQLGEAFGYRPNAAKRTSEQLMRRYYWAAKAVTQLNTVVLQNIEARLFPTELGIT
RTINGRFVERQGMLEIADPELYQREPAAILETFLVYEQTRGVKGLAANTLRALYNARTQMDARWRRDPANRATFLSILQQ
PQGITHALRLMNQTSVLGRYLVNFRRIVGQMQHDLFHVYTVDQHILMVVRNVRRFAIVEHAHEFPFCSQLMANFDKPWVL
TVAALFHDIAKGRGGDHSVLGMADARRFCKQHGIASEDADLIVWLVEHHLTMSQVAQKQDLGDPEVIRHFADQVGSERYL
SALYLLTVADIRGTSPKVWNAWKAKLLEDLYRITLRVLGGATTDPHAVLEGRKEEARVLLRLAAMDPHAHEALWAQLDVG
VFLRHDARDIAWFTRHFYNRVDTTLPIVRARISPVGEGLQVAVYSPDRPDLFARICGYFERKGLTILDAKIHTTKHGYAL
DTFQVADPGSGLVEPGHYRDIITLVEHELAELIARETVLAEPPRGRISRQSRSFPIKPRVDLRPDERGQYYLLSLSATDR
TGLLYAIARVLARHRVSVHTARINTLGERVEDVFLLDGRRLTQDNKLQLALESELLEALAI

Specific function: Modifies, by uridylylation or deuridylylation the PII (glnB) regulatory protein

COG id: COG2844

COG function: function code O; UTP:GlnB (protein PII) uridylyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glnD family

Homologues:

Organism=Escherichia coli, GI1786363, Length=871, Percent_Identity=36.1653272101033, Blast_Score=510, Evalue=1e-145,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): GLND_RALSO (Q8XZJ3)

Other databases:

- EMBL:   AL646052
- RefSeq:   NP_519523.1
- ProteinModelPortal:   Q8XZJ3
- SMR:   Q8XZJ3
- GeneID:   1220226
- GenomeReviews:   AL646052_GR
- KEGG:   rso:RSc1402
- NMPDR:   fig|267608.1.peg.1402
- HOGENOM:   HBG687872
- OMA:   MQHDLFH
- ProtClustDB:   PRK03059
- BioCyc:   RSOL267608:RSC1402-MONOMER
- BRENDA:   2.7.7.59
- HAMAP:   MF_00277
- InterPro:   IPR002912
- InterPro:   IPR010043
- InterPro:   IPR003607
- InterPro:   IPR002934
- InterPro:   IPR013546
- PANTHER:   PTHR13734:SF1
- PIRSF:   PIRSF006288
- SMART:   SM00471
- TIGRFAMs:   TIGR01693

Pfam domain/function: PF01842 ACT; PF08335 GlnD_UR_UTase; PF01909 NTP_transf_2

EC number: =2.7.7.59

Molecular weight: Translated: 97494; Mature: 97494

Theoretical pI: Translated: 7.51; Mature: 7.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHTAAAATPATSPRDILKAERAHLFAQFEQHANVNLLVTKLARAVDQALILLWQDEGMPD
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHEEEEECCCCCCC
TCALVAVGGYGRGELFPHSDVDILLLLPQTADKALETRLEAFIGHCWDMGLDIGSSVRTV
CEEEEEECCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
DECISEATQDVTVCTSLLEARLLTGDEGLYRTFETHYQGHLDAADFYQSKMLEMRQRHAK
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCC
YQDTPYSLEPNCKESPGGLRDLQVILWMTRAAGFGSSWNELLVNQLLTRREAKELAANER
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
LLKTIRARLHLLAGRRQDVLVFDLQTQLGEAFGYRPNAAKRTSEQLMRRYYWAAKAVTQL
HHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
NTVVLQNIEARLFPTELGITRTINGRFVERQGMLEIADPELYQREPAAILETFLVYEQTR
HHHHHHCCHHEEEEHHCCEEEECCCEEECCCCCEEECCCHHHCCCHHHHHHHHHHHHHHC
GVKGLAANTLRALYNARTQMDARWRRDPANRATFLSILQQPQGITHALRLMNQTSVLGRY
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
LVNFRRIVGQMQHDLFHVYTVDQHILMVVRNVRRFAIVEHAHEFPFCSQLMANFDKPWVL
HHHHHHHHHHHHHHHEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCHHH
TVAALFHDIAKGRGGDHSVLGMADARRFCKQHGIASEDADLIVWLVEHHLTMSQVAQKQD
HHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHCCCCCCCCCEEEEHHHHCCCHHHHHHHHC
LGDPEVIRHFADQVGSERYLSALYLLTVADIRGTSPKVWNAWKAKLLEDLYRITLRVLGG
CCCHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
ATTDPHAVLEGRKEEARVLLRLAAMDPHAHEALWAQLDVGVFLRHDARDIAWFTRHFYNR
CCCCCHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHH
VDTTLPIVRARISPVGEGLQVAVYSPDRPDLFARICGYFERKGLTILDAKIHTTKHGYAL
HHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEEEEECCCCCEE
DTFQVADPGSGLVEPGHYRDIITLVEHELAELIARETVLAEPPRGRISRQSRSFPIKPRV
EEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
DLRPDERGQYYLLSLSATDRTGLLYAIARVLARHRVSVHTARINTLGERVEDVFLLDGRR
CCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCC
LTQDNKLQLALESELLEALAI
CCCCCCEEEHHHHHHHHHHCC
>Mature Secondary Structure
MHTAAAATPATSPRDILKAERAHLFAQFEQHANVNLLVTKLARAVDQALILLWQDEGMPD
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHEEEEECCCCCCC
TCALVAVGGYGRGELFPHSDVDILLLLPQTADKALETRLEAFIGHCWDMGLDIGSSVRTV
CEEEEEECCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
DECISEATQDVTVCTSLLEARLLTGDEGLYRTFETHYQGHLDAADFYQSKMLEMRQRHAK
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCC
YQDTPYSLEPNCKESPGGLRDLQVILWMTRAAGFGSSWNELLVNQLLTRREAKELAANER
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
LLKTIRARLHLLAGRRQDVLVFDLQTQLGEAFGYRPNAAKRTSEQLMRRYYWAAKAVTQL
HHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
NTVVLQNIEARLFPTELGITRTINGRFVERQGMLEIADPELYQREPAAILETFLVYEQTR
HHHHHHCCHHEEEEHHCCEEEECCCEEECCCCCEEECCCHHHCCCHHHHHHHHHHHHHHC
GVKGLAANTLRALYNARTQMDARWRRDPANRATFLSILQQPQGITHALRLMNQTSVLGRY
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
LVNFRRIVGQMQHDLFHVYTVDQHILMVVRNVRRFAIVEHAHEFPFCSQLMANFDKPWVL
HHHHHHHHHHHHHHHEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCHHH
TVAALFHDIAKGRGGDHSVLGMADARRFCKQHGIASEDADLIVWLVEHHLTMSQVAQKQD
HHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHCCCCCCCCCEEEEHHHHCCCHHHHHHHHC
LGDPEVIRHFADQVGSERYLSALYLLTVADIRGTSPKVWNAWKAKLLEDLYRITLRVLGG
CCCHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
ATTDPHAVLEGRKEEARVLLRLAAMDPHAHEALWAQLDVGVFLRHDARDIAWFTRHFYNR
CCCCCHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHH
VDTTLPIVRARISPVGEGLQVAVYSPDRPDLFARICGYFERKGLTILDAKIHTTKHGYAL
HHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEEEEECCCCCEE
DTFQVADPGSGLVEPGHYRDIITLVEHELAELIARETVLAEPPRGRISRQSRSFPIKPRV
EEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
DLRPDERGQYYLLSLSATDRTGLLYAIARVLARHRVSVHTARINTLGERVEDVFLLDGRR
CCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCC
LTQDNKLQLALESELLEALAI
CCCCCCEEEHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11823852