| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is rimI [H]
Identifier: 17546087
GI number: 17546087
Start: 1457030
End: 1457563
Strand: Direct
Name: rimI [H]
Synonym: RSc1368
Alternate gene names: 17546087
Gene position: 1457030-1457563 (Clockwise)
Preceding gene: 17546086
Following gene: 17546088
Centisome position: 39.21
GC content: 71.35
Gene sequence:
>534_bases ATGAGCCAGGTCCAGGTCGACCGGGCCCTCGCCGGCCTCATTGTCCGCGCGCCGCTGCCCGCCGGCTGGCGCGCCGAGCG GATGTCCGCGCTGGACGTGGCCGCCGTGGCGGCAGTCGAGCAGGCGGCATTCGCCTTTCCGTGGTCGCGCGGCAATTTCG AGGATTCGCTCAAGTCGGGCCACCTCGGCATCGTGCTGCGCGACGGCGGCAACCAGGTTGCCGGCTACCTGATCCTGATG CCGGTGGTGGATGAGATGCACCTGCTGAACGTGACCGTGGCGCCCGCCTGGCAGCGGCAGGGGCTGGGCCGCTGGCTACT GCGCGCCGCGCAGGCGCTGACGCTGGCGCACGGTTTCGCCAGCCTGCTGCTGGAAGTGCGGCCGTCCAATGCCGGCGCGA TCGCGCTGTATCGCCGCGTCGGGTTTGCCGAGATCGGCCGGCGCAAGCGCTACTACCCGGCCGAGAACAACACGCGGGAA GACGCGCTGGTGATGCGCATCGCCTGCGAAGCCGGCGGCGTGGAGGCGGCATGA
Upstream 100 bases:
>100_bases CGGAAGACGCCGCGCCGCTGTACGTGCGCGACAAGGTCGCGCTGACCATCGAAGAGCGCCAGGCCGTGCAGCAGGCCAAG GCCGCAGCGGGTGCGCGGGC
Downstream 100 bases:
>100_bases GCAGCGGGCGGAAGCTTTGCGCGGCCGGCCCGCGCGCATCGGTGACCCACAACCCTCCGGAGGCGGCCGCATGAACCGTC GAGCCCGCATGCTGGAAGCG
Product: acyltransferase
Products: NA
Alternate protein names: Acetylating enzyme for N-terminal of ribosomal protein S18 [H]
Number of amino acids: Translated: 177; Mature: 176
Protein sequence:
>177_residues MSQVQVDRALAGLIVRAPLPAGWRAERMSALDVAAVAAVEQAAFAFPWSRGNFEDSLKSGHLGIVLRDGGNQVAGYLILM PVVDEMHLLNVTVAPAWQRQGLGRWLLRAAQALTLAHGFASLLLEVRPSNAGAIALYRRVGFAEIGRRKRYYPAENNTRE DALVMRIACEAGGVEAA
Sequences:
>Translated_177_residues MSQVQVDRALAGLIVRAPLPAGWRAERMSALDVAAVAAVEQAAFAFPWSRGNFEDSLKSGHLGIVLRDGGNQVAGYLILM PVVDEMHLLNVTVAPAWQRQGLGRWLLRAAQALTLAHGFASLLLEVRPSNAGAIALYRRVGFAEIGRRKRYYPAENNTRE DALVMRIACEAGGVEAA >Mature_176_residues SQVQVDRALAGLIVRAPLPAGWRAERMSALDVAAVAAVEQAAFAFPWSRGNFEDSLKSGHLGIVLRDGGNQVAGYLILMP VVDEMHLLNVTVAPAWQRQGLGRWLLRAAQALTLAHGFASLLLEVRPSNAGAIALYRRVGFAEIGRRKRYYPAENNTRED ALVMRIACEAGGVEAA
Specific function: This enzyme acetylates the N-terminal alanine of ribosomal protein S18 [H]
COG id: COG0456
COG function: function code R; Acetyltransferases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 N-acetyltransferase domain [H]
Homologues:
Organism=Escherichia coli, GI2367381, Length=138, Percent_Identity=42.7536231884058, Blast_Score=102, Evalue=1e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000182 - InterPro: IPR016181 - InterPro: IPR006464 [H]
Pfam domain/function: PF00583 Acetyltransf_1 [H]
EC number: =2.3.1.128 [H]
Molecular weight: Translated: 19147; Mature: 19016
Theoretical pI: Translated: 9.63; Mature: 9.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQVQVDRALAGLIVRAPLPAGWRAERMSALDVAAVAAVEQAAFAFPWSRGNFEDSLKSG CCCCHHHHHHHHEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCC HLGIVLRDGGNQVAGYLILMPVVDEMHLLNVTVAPAWQRQGLGRWLLRAAQALTLAHGFA CEEEEEECCCCCEEEEEEEEEHHCCEEEEEEEECCCHHHCCHHHHHHHHHHHHHHHHHHH SLLLEVRPSNAGAIALYRRVGFAEIGRRKRYYPAENNTREDALVMRIACEAGGVEAA HHHEEECCCCCCEEEHHHHHCHHHHCCCCCCCCCCCCCCCHHEEEEEEECCCCCCCC >Mature Secondary Structure SQVQVDRALAGLIVRAPLPAGWRAERMSALDVAAVAAVEQAAFAFPWSRGNFEDSLKSG CCCHHHHHHHHEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCC HLGIVLRDGGNQVAGYLILMPVVDEMHLLNVTVAPAWQRQGLGRWLLRAAQALTLAHGFA CEEEEEECCCCCEEEEEEEEEHHCCEEEEEEEECCCHHHCCHHHHHHHHHHHHHHHHHHH SLLLEVRPSNAGAIALYRRVGFAEIGRRKRYYPAENNTREDALVMRIACEAGGVEAA HHHEEECCCCCCEEEHHHHHCHHHHCCCCCCCCCCCCCCCHHEEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]