| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is ytfP [C]
Identifier: 17546074
GI number: 17546074
Start: 1442693
End: 1443106
Strand: Direct
Name: ytfP [C]
Synonym: RSc1355
Alternate gene names: 17546074
Gene position: 1442693-1443106 (Clockwise)
Preceding gene: 17546073
Following gene: 17546075
Centisome position: 38.82
GC content: 71.74
Gene sequence:
>414_bases ATGACTGAGGCCATCCACGTCTTCGCCTACGGCACGCTGCGCGCGGGCGAGGCCAACGACCTGCGCGTCGCCGCGTCCCG GCGCGGTATCGCCGAGCCGAAGCTGATCGGCCACGCGACGCTGCACGGTCGGCTGTACGACTTCGGCGCGTATCCCGGCC TGGTGCCGGACCCGACCGGCACCGCCGTGCGCGGCGACGTCTACCGCATCGACCCCGGGCTTGTGCCGGTGCTCGACACG ATCGAAGCGGTCTACCCTGGCGGCGGCGCGCTGTTCCTGCGCGAGACCCACACCGTGATGCTCGGCAGCGAGCCGCTCGA CTGCATCGTCTATCCGGTCAGTGCCGGGCAGGTGGCGGGGCGGCACGTCATTACCGGTGGGGATTGGGTGGCGTACCGGC TGGCGCGGGGGTGA
Upstream 100 bases:
>100_bases GAGCGCGACATCGGCGTGCAGATGCCCGGCGCCTACATCCACCCGGGCGAATGGATCTACGGCGACGAAGATGGCGTGCT GGTCTCGCGGGAGCGGTTGC
Downstream 100 bases:
>100_bases GCCGGGGCCGGATGGCATTGGCCGGTCCGGCCGACGCTGGCCCACATCGGCCGTAGGCCGGTGCCGGGGCGTGCCGGCAG GTTCGCCTGTTGCCGTGTTT
Product: hypothetical protein
Products: NA
Alternate protein names: Butirosin Biosynthesis Protein BtrG; AIG2-Like Family
Number of amino acids: Translated: 137; Mature: 136
Protein sequence:
>137_residues MTEAIHVFAYGTLRAGEANDLRVAASRRGIAEPKLIGHATLHGRLYDFGAYPGLVPDPTGTAVRGDVYRIDPGLVPVLDT IEAVYPGGGALFLRETHTVMLGSEPLDCIVYPVSAGQVAGRHVITGGDWVAYRLARG
Sequences:
>Translated_137_residues MTEAIHVFAYGTLRAGEANDLRVAASRRGIAEPKLIGHATLHGRLYDFGAYPGLVPDPTGTAVRGDVYRIDPGLVPVLDT IEAVYPGGGALFLRETHTVMLGSEPLDCIVYPVSAGQVAGRHVITGGDWVAYRLARG >Mature_136_residues TEAIHVFAYGTLRAGEANDLRVAASRRGIAEPKLIGHATLHGRLYDFGAYPGLVPDPTGTAVRGDVYRIDPGLVPVLDTI EAVYPGGGALFLRETHTVMLGSEPLDCIVYPVSAGQVAGRHVITGGDWVAYRLARG
Specific function: Unknown
COG id: COG2105
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14541; Mature: 14410
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEAIHVFAYGTLRAGEANDLRVAASRRGIAEPKLIGHATLHGRLYDFGAYPGLVPDPTG CCCEEEEEEEEEEECCCCCCEEEEECCCCCCCCCEEEEEEECCEEEECCCCCCCCCCCCC TAVRGDVYRIDPGLVPVLDTIEAVYPGGGALFLRETHTVMLGSEPLDCIVYPVSAGQVAG CEEECCEEEECCCCCCHHHHHHHCCCCCCEEEEEECEEEEECCCCCEEEEEECCCCCCCC RHVITGGDWVAYRLARG CEEEECCCEEEEEEECC >Mature Secondary Structure TEAIHVFAYGTLRAGEANDLRVAASRRGIAEPKLIGHATLHGRLYDFGAYPGLVPDPTG CCEEEEEEEEEEECCCCCCEEEEECCCCCCCCCEEEEEEECCEEEECCCCCCCCCCCCC TAVRGDVYRIDPGLVPVLDTIEAVYPGGGALFLRETHTVMLGSEPLDCIVYPVSAGQVAG CEEECCEEEECCCCCCHHHHHHHCCCCCCEEEEEECEEEEECCCCCEEEEEECCCCCCCC RHVITGGDWVAYRLARG CEEEECCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA