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The map label for this gene is 17546075

Identifier: 17546075

GI number: 17546075

Start: 1443284

End: 1445146

Strand: Direct

Name: 17546075

Synonym: RSc1356

Alternate gene names: NA

Gene position: 1443284-1445146 (Clockwise)

Preceding gene: 17546074

Following gene: 17546076

Centisome position: 38.84

GC content: 67.74

Gene sequence:

>1863_bases
ATGGTGTCGCGCATTCCCACCGGCAACCGCGGGCAAGGCAACGGAATCGAGCAATCTGCCTCGTCGCACGCCACCGAGGC
TACGCCCTGGCTGGGCGTGAACCTGCCGTATGGGCACTGGCTGCCTTCTTCTGCCCGCTCGGTGGTCTCGCGGGCCTCGT
CGCTCCTGGGCGGCCTGGCGAACTTCAGGTGGGGCGGCCGGCCGGCAAGCGCCCGGCCCGCGCCGAACATTCGGTCTGCC
GCCATCGCGCCCGCCCAGCAGACGCTGCCGCCCGAGCTGTGGCAGCAGATCGCCACCCTTGCCGGAGCGCGGCCCCGGCG
TGCCATGCGGGAGGTCAGCCTCGAACTGCGGAATGCCTCGCGGGCGGTCGTGACGCACCTGACCATCAGCGACCCGGCGA
TGTTCCGCCAACTGAGCCTGTACCCGGCGCTCAAGAGCGTGCGCTTCAAGGGGGAGCTCACGCTCGAGGCGCTGAAAGCC
TTGCCGCCAGAACTGGAGCACCTGGAGATCGGCCGCTGCACGGGCAGCGCCATCTCGGCCGAGGGGCTGGCGCATCTCGC
CTCGATGCCGCTCAAGTCGCTCAACCTGAACGGCATCGAAATCGGTGTCGAGGGCGCGCGCACGCTCGCGGCCAGCAAGT
CGCTCGTCTCGCTCAGCCTGATCGGCTGCGGGATCGGCGACCGGGCCGCCCAGGCGCTGGTGGCCAGCCGGTCGATCCAG
TGTCTTGACCTGAGCGTGAACAGGATCGGACGCGACGGCGCGCAGGCGCTGGCCGGCGCGCCACTGGTCTCGCTCAATCT
GCACAACAACGAGATCGGCAACGAGGGCGCGCGGGTGCTGGCGACAAGCCGGACGCTGACGTCGCTCGACGTGAGCAATA
ACGGCGTCGGCAATGCCGGGGCGGAGGCTTTTGCGGGCAACACCGTGTTGAAGCAGCTCAGCCTGGCAGGCGGCATGATC
AGCGGGGACGGTGCTCAAGCGCTGGCGGACAACAAGTCGCTCACCGATCTCGACCTGAGCAACAACCGCCTGGGCGACGC
AGGCGCGCAGGCGCTGGCGGACAGCGAGTCATTCGTCTCGCTCAAGCTGGGGGGCAACGAGATCGGCGCCGATGGCGCAG
AGGCGCTGGCGCGCAATGTCGTGCTCCAATCTCTCAATCTGAGCTACAACCCCATCGGCTTCTGGGGCGTCAACGCTCTA
GGTAGGGCCAAGCTGCGCAAGCTCGATCTGTGCGCCTGCGCCATCGATTCGGACGGTGCGAGCGCCTTGGCGCGCAATAC
CTCGCTCGCCTCGCTCTACCTCGGCAGTAACCGGATCGGCGATGACGGCGCGCGGGCACTGGCAAAAAACAGCACGCTGA
CCCTGCTCAACCTGAGCGGGAACAACATTCATGCCGTCGGTGCCCAGGCGCTGGCAAGCAATGACTCGCTGATCACGCTC
GACCTGAGCCGCAACGGGATCGGCGATGACGGCACCGCGGCACTGGCGTGTCATCCACGGCTGACTTCGCTTAACCTGAG
CCGTAACCAGATCGGATCTACCGGTGCGCAGCAATTGGCGAAAAGCGCCACGCTGGCCGAGCTCGACCTGAGCGAGAACC
GCATCGGTCCCGAGGGCGCTGAGGCGCTGGCCCGCAGTACGGTGCTCACCACGCTCAACGTGAGCTACAACGCCATTGGA
GAGGCCGGTGCGCGGGCGCTGGCCGAGAGCGTTTCGCTGACCTCGCTCGACGCGCGCCGGAACGGGATCGGCGAGGACGG
CGCCAAGGTGCTGGAGGCCAATACCCGGATCACGGGCACGCCGCAGAACCCGAATTTCCTGGCGGAGGATGTGCCGAGGC
CGGATGTGCGGTGGAGGGACTGA

Upstream 100 bases:

>100_bases
CAGGTTCGCCTGTTGCCGTGTTTTTTCGTGGCCTGCGCCGCCGCGCCCGGCCGGATTCCGCCAAGCTCGCGCCCGACATG
GATAGGTAACGGAGACGGCG

Downstream 100 bases:

>100_bases
ATGTGACGTGTGCTTGAGGTGCTGCCGTGGCGGCAGGGCGCGCCCGGACGGCGTGCGCTTCGTTTGCCCGTGTGGCGGCT
TCGTCAGGCCGGCTGTACCC

Product: GALA protein 4

Products: NA

Alternate protein names: Type III Effector; GALA Protein; Leucine-Rich Repeat Protein; Leucine-Rich Repeat-Containing Protein; Leucine-Rich Repeat-Containing Ribonuclease Inhibitor; Type III Effector Gala6 Protein; Guanosine Polyphosphate Pyrophosphohydrolase/Synthetase; Type III Effector Protein; Leucine-Rich Repeat Ribonuclease Inhibitor Subtype; Cyclin Domain-Containing Protein

Number of amino acids: Translated: 620; Mature: 620

Protein sequence:

>620_residues
MVSRIPTGNRGQGNGIEQSASSHATEATPWLGVNLPYGHWLPSSARSVVSRASSLLGGLANFRWGGRPASARPAPNIRSA
AIAPAQQTLPPELWQQIATLAGARPRRAMREVSLELRNASRAVVTHLTISDPAMFRQLSLYPALKSVRFKGELTLEALKA
LPPELEHLEIGRCTGSAISAEGLAHLASMPLKSLNLNGIEIGVEGARTLAASKSLVSLSLIGCGIGDRAAQALVASRSIQ
CLDLSVNRIGRDGAQALAGAPLVSLNLHNNEIGNEGARVLATSRTLTSLDVSNNGVGNAGAEAFAGNTVLKQLSLAGGMI
SGDGAQALADNKSLTDLDLSNNRLGDAGAQALADSESFVSLKLGGNEIGADGAEALARNVVLQSLNLSYNPIGFWGVNAL
GRAKLRKLDLCACAIDSDGASALARNTSLASLYLGSNRIGDDGARALAKNSTLTLLNLSGNNIHAVGAQALASNDSLITL
DLSRNGIGDDGTAALACHPRLTSLNLSRNQIGSTGAQQLAKSATLAELDLSENRIGPEGAEALARSTVLTTLNVSYNAIG
EAGARALAESVSLTSLDARRNGIGEDGAKVLEANTRITGTPQNPNFLAEDVPRPDVRWRD

Sequences:

>Translated_620_residues
MVSRIPTGNRGQGNGIEQSASSHATEATPWLGVNLPYGHWLPSSARSVVSRASSLLGGLANFRWGGRPASARPAPNIRSA
AIAPAQQTLPPELWQQIATLAGARPRRAMREVSLELRNASRAVVTHLTISDPAMFRQLSLYPALKSVRFKGELTLEALKA
LPPELEHLEIGRCTGSAISAEGLAHLASMPLKSLNLNGIEIGVEGARTLAASKSLVSLSLIGCGIGDRAAQALVASRSIQ
CLDLSVNRIGRDGAQALAGAPLVSLNLHNNEIGNEGARVLATSRTLTSLDVSNNGVGNAGAEAFAGNTVLKQLSLAGGMI
SGDGAQALADNKSLTDLDLSNNRLGDAGAQALADSESFVSLKLGGNEIGADGAEALARNVVLQSLNLSYNPIGFWGVNAL
GRAKLRKLDLCACAIDSDGASALARNTSLASLYLGSNRIGDDGARALAKNSTLTLLNLSGNNIHAVGAQALASNDSLITL
DLSRNGIGDDGTAALACHPRLTSLNLSRNQIGSTGAQQLAKSATLAELDLSENRIGPEGAEALARSTVLTTLNVSYNAIG
EAGARALAESVSLTSLDARRNGIGEDGAKVLEANTRITGTPQNPNFLAEDVPRPDVRWRD
>Mature_620_residues
MVSRIPTGNRGQGNGIEQSASSHATEATPWLGVNLPYGHWLPSSARSVVSRASSLLGGLANFRWGGRPASARPAPNIRSA
AIAPAQQTLPPELWQQIATLAGARPRRAMREVSLELRNASRAVVTHLTISDPAMFRQLSLYPALKSVRFKGELTLEALKA
LPPELEHLEIGRCTGSAISAEGLAHLASMPLKSLNLNGIEIGVEGARTLAASKSLVSLSLIGCGIGDRAAQALVASRSIQ
CLDLSVNRIGRDGAQALAGAPLVSLNLHNNEIGNEGARVLATSRTLTSLDVSNNGVGNAGAEAFAGNTVLKQLSLAGGMI
SGDGAQALADNKSLTDLDLSNNRLGDAGAQALADSESFVSLKLGGNEIGADGAEALARNVVLQSLNLSYNPIGFWGVNAL
GRAKLRKLDLCACAIDSDGASALARNTSLASLYLGSNRIGDDGARALAKNSTLTLLNLSGNNIHAVGAQALASNDSLITL
DLSRNGIGDDGTAALACHPRLTSLNLSRNQIGSTGAQQLAKSATLAELDLSENRIGPEGAEALARSTVLTTLNVSYNAIG
EAGARALAESVSLTSLDARRNGIGEDGAKVLEANTRITGTPQNPNFLAEDVPRPDVRWRD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI118918429, Length=381, Percent_Identity=39.1076115485564, Blast_Score=153, Evalue=4e-37,
Organism=Homo sapiens, GI62912472, Length=351, Percent_Identity=28.2051282051282, Blast_Score=91, Evalue=3e-18,
Organism=Homo sapiens, GI62912470, Length=351, Percent_Identity=28.2051282051282, Blast_Score=91, Evalue=5e-18,
Organism=Homo sapiens, GI62912474, Length=255, Percent_Identity=30.9803921568627, Blast_Score=80, Evalue=6e-15,
Organism=Homo sapiens, GI11545912, Length=299, Percent_Identity=31.7725752508361, Blast_Score=80, Evalue=7e-15,
Organism=Homo sapiens, GI21955154, Length=357, Percent_Identity=27.1708683473389, Blast_Score=80, Evalue=8e-15,
Organism=Homo sapiens, GI168986655, Length=243, Percent_Identity=31.6872427983539, Blast_Score=78, Evalue=3e-14,
Organism=Homo sapiens, GI116268109, Length=372, Percent_Identity=29.5698924731183, Blast_Score=76, Evalue=1e-13,
Organism=Homo sapiens, GI119395764, Length=277, Percent_Identity=31.7689530685921, Blast_Score=75, Evalue=2e-13,
Organism=Homo sapiens, GI34878693, Length=277, Percent_Identity=31.7689530685921, Blast_Score=75, Evalue=2e-13,
Organism=Homo sapiens, GI229577123, Length=289, Percent_Identity=29.0657439446367, Blast_Score=74, Evalue=5e-13,
Organism=Homo sapiens, GI158321897, Length=277, Percent_Identity=30.3249097472924, Blast_Score=74, Evalue=5e-13,
Organism=Homo sapiens, GI28827813, Length=359, Percent_Identity=27.0194986072423, Blast_Score=74, Evalue=6e-13,
Organism=Homo sapiens, GI4504379, Length=323, Percent_Identity=27.2445820433437, Blast_Score=71, Evalue=4e-12,
Organism=Homo sapiens, GI42822874, Length=422, Percent_Identity=26.7772511848341, Blast_Score=69, Evalue=1e-11,
Organism=Homo sapiens, GI42822872, Length=422, Percent_Identity=26.7772511848341, Blast_Score=69, Evalue=1e-11,
Organism=Homo sapiens, GI42822870, Length=422, Percent_Identity=26.7772511848341, Blast_Score=69, Evalue=1e-11,
Organism=Homo sapiens, GI42822868, Length=422, Percent_Identity=26.7772511848341, Blast_Score=69, Evalue=1e-11,
Organism=Homo sapiens, GI42822866, Length=422, Percent_Identity=26.7772511848341, Blast_Score=69, Evalue=1e-11,
Organism=Homo sapiens, GI42822864, Length=422, Percent_Identity=26.7772511848341, Blast_Score=69, Evalue=1e-11,
Organism=Homo sapiens, GI21361547, Length=422, Percent_Identity=26.7772511848341, Blast_Score=69, Evalue=1e-11,
Organism=Homo sapiens, GI42794608, Length=422, Percent_Identity=26.7772511848341, Blast_Score=69, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI71984630, Length=482, Percent_Identity=23.8589211618257, Blast_Score=87, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI17569511, Length=302, Percent_Identity=28.1456953642384, Blast_Score=76, Evalue=6e-14,
Organism=Caenorhabditis elegans, GI17542470, Length=316, Percent_Identity=27.8481012658228, Blast_Score=74, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17542472, Length=316, Percent_Identity=27.8481012658228, Blast_Score=74, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI71980576, Length=300, Percent_Identity=29.3333333333333, Blast_Score=69, Evalue=9e-12,
Organism=Caenorhabditis elegans, GI17551022, Length=275, Percent_Identity=25.0909090909091, Blast_Score=67, Evalue=3e-11,
Organism=Drosophila melanogaster, GI221500776, Length=494, Percent_Identity=24.8987854251012, Blast_Score=84, Evalue=3e-16,
Organism=Drosophila melanogaster, GI21358607, Length=438, Percent_Identity=24.4292237442922, Blast_Score=82, Evalue=2e-15,
Organism=Drosophila melanogaster, GI24657927, Length=364, Percent_Identity=28.8461538461538, Blast_Score=81, Evalue=2e-15,
Organism=Drosophila melanogaster, GI24657920, Length=364, Percent_Identity=28.8461538461538, Blast_Score=81, Evalue=2e-15,
Organism=Drosophila melanogaster, GI17136634, Length=458, Percent_Identity=25.3275109170306, Blast_Score=80, Evalue=4e-15,
Organism=Drosophila melanogaster, GI161077058, Length=294, Percent_Identity=24.4897959183673, Blast_Score=80, Evalue=5e-15,
Organism=Drosophila melanogaster, GI17648023, Length=419, Percent_Identity=26.7303102625298, Blast_Score=77, Evalue=4e-14,
Organism=Drosophila melanogaster, GI24657961, Length=303, Percent_Identity=24.7524752475248, Blast_Score=74, Evalue=3e-13,
Organism=Drosophila melanogaster, GI24657983, Length=303, Percent_Identity=24.7524752475248, Blast_Score=73, Evalue=5e-13,
Organism=Drosophila melanogaster, GI24657976, Length=303, Percent_Identity=24.7524752475248, Blast_Score=73, Evalue=5e-13,
Organism=Drosophila melanogaster, GI24657968, Length=303, Percent_Identity=24.7524752475248, Blast_Score=73, Evalue=5e-13,
Organism=Drosophila melanogaster, GI281363494, Length=325, Percent_Identity=26.7692307692308, Blast_Score=72, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24667524, Length=362, Percent_Identity=26.7955801104972, Blast_Score=71, Evalue=2e-12,
Organism=Drosophila melanogaster, GI281363846, Length=380, Percent_Identity=27.6315789473684, Blast_Score=70, Evalue=4e-12,
Organism=Drosophila melanogaster, GI17648021, Length=441, Percent_Identity=24.2630385487528, Blast_Score=67, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 64198; Mature: 64198

Theoretical pI: Translated: 7.87; Mature: 7.87

Prosite motif: PS00867 CPSASE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSRIPTGNRGQGNGIEQSASSHATEATPWLGVNLPYGHWLPSSARSVVSRASSLLGGLA
CCCCCCCCCCCCCCCCCHHHHCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHH
NFRWGGRPASARPAPNIRSAAIAPAQQTLPPELWQQIATLAGARPRRAMREVSLELRNAS
HCCCCCCCCCCCCCCCCCHHCCCCHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCC
RAVVTHLTISDPAMFRQLSLYPALKSVRFKGELTLEALKALPPELEHLEIGRCTGSAISA
EEEEEEEEECCHHHHHHHHHHHHHHHEEECCCHHHHHHHHCCCCCCEEEECCCCCCCCCH
EGLAHLASMPLKSLNLNGIEIGVEGARTLAASKSLVSLSLIGCGIGDRAAQALVASRSIQ
HHHHHHHHCCHHHCCCCCEEEECCCHHHHHHHHHHEEEEEEECCCCHHHHHHHHHHCCEE
CLDLSVNRIGRDGAQALAGAPLVSLNLHNNEIGNEGARVLATSRTLTSLDVSNNGVGNAG
EEEEEHHHCCCCHHHHHCCCCEEEEEECCCCCCCCCCEEEEECCEEEEEECCCCCCCCCC
AEAFAGNTVLKQLSLAGGMISGDGAQALADNKSLTDLDLSNNRLGDAGAQALADSESFVS
CHHHHHHHHHHHHHHHCCEECCCCCHHHHCCCCCEEECCCCCCCCCHHHHHHCCCCCEEE
LKLGGNEIGADGAEALARNVVLQSLNLSYNPIGFWGVNALGRAKLRKLDLCACAIDSDGA
EEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHHEEEEEEEECCCCH
SALARNTSLASLYLGSNRIGDDGARALAKNSTLTLLNLSGNNIHAVGAQALASNDSLITL
HHHHCCCCEEEEEECCCCCCCHHHHHHHCCCEEEEEEECCCEEEEECHHHHCCCCCEEEE
DLSRNGIGDDGTAALACHPRLTSLNLSRNQIGSTGAQQLAKSATLAELDLSENRIGPEGA
EECCCCCCCCCCEEEEECCCCEEECCCHHHCCCHHHHHHHHHCHHEEECCCCCCCCCHHH
EALARSTVLTTLNVSYNAIGEAGARALAESVSLTSLDARRNGIGEDGAKVLEANTRITGT
HHHHHHHEEEEEECCHHHHHHHHHHHHHHHCCCEEEHHHHCCCCCCCHHEEECCCEEECC
PQNPNFLAEDVPRPDVRWRD
CCCCCCHHHCCCCCCCCCCC
>Mature Secondary Structure
MVSRIPTGNRGQGNGIEQSASSHATEATPWLGVNLPYGHWLPSSARSVVSRASSLLGGLA
CCCCCCCCCCCCCCCCCHHHHCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHH
NFRWGGRPASARPAPNIRSAAIAPAQQTLPPELWQQIATLAGARPRRAMREVSLELRNAS
HCCCCCCCCCCCCCCCCCHHCCCCHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCC
RAVVTHLTISDPAMFRQLSLYPALKSVRFKGELTLEALKALPPELEHLEIGRCTGSAISA
EEEEEEEEECCHHHHHHHHHHHHHHHEEECCCHHHHHHHHCCCCCCEEEECCCCCCCCCH
EGLAHLASMPLKSLNLNGIEIGVEGARTLAASKSLVSLSLIGCGIGDRAAQALVASRSIQ
HHHHHHHHCCHHHCCCCCEEEECCCHHHHHHHHHHEEEEEEECCCCHHHHHHHHHHCCEE
CLDLSVNRIGRDGAQALAGAPLVSLNLHNNEIGNEGARVLATSRTLTSLDVSNNGVGNAG
EEEEEHHHCCCCHHHHHCCCCEEEEEECCCCCCCCCCEEEEECCEEEEEECCCCCCCCCC
AEAFAGNTVLKQLSLAGGMISGDGAQALADNKSLTDLDLSNNRLGDAGAQALADSESFVS
CHHHHHHHHHHHHHHHCCEECCCCCHHHHCCCCCEEECCCCCCCCCHHHHHHCCCCCEEE
LKLGGNEIGADGAEALARNVVLQSLNLSYNPIGFWGVNALGRAKLRKLDLCACAIDSDGA
EEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHHEEEEEEEECCCCH
SALARNTSLASLYLGSNRIGDDGARALAKNSTLTLLNLSGNNIHAVGAQALASNDSLITL
HHHHCCCCEEEEEECCCCCCCHHHHHHHCCCEEEEEEECCCEEEEECHHHHCCCCCEEEE
DLSRNGIGDDGTAALACHPRLTSLNLSRNQIGSTGAQQLAKSATLAELDLSENRIGPEGA
EECCCCCCCCCCEEEEECCCCEEECCCHHHCCCHHHHHHHHHCHHEEECCCCCCCCCHHH
EALARSTVLTTLNVSYNAIGEAGARALAESVSLTSLDARRNGIGEDGAKVLEANTRITGT
HHHHHHHEEEEEECCHHHHHHHHHHHHHHHCCCEEEHHHHCCCCCCCHHEEECCCEEECC
PQNPNFLAEDVPRPDVRWRD
CCCCCCHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA