| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is menG [C]
Identifier: 17546073
GI number: 17546073
Start: 1442194
End: 1442700
Strand: Direct
Name: menG [C]
Synonym: RSc1354
Alternate gene names: 17546073
Gene position: 1442194-1442700 (Clockwise)
Preceding gene: 17546072
Following gene: 17546074
Centisome position: 38.81
GC content: 70.22
Gene sequence:
>507_bases ATGACGACGATGATGATTCCCGTGACCGACCTGTGCGACGCGCACGAAGACCAGCTCGCCAGCGGCGCCGTGCGCGTGCT CGCGCCGGTGTTCCGCAGCTTCGGCGCGCGCGCGGCCTTTGCCGGGCCGGCCGCCACGCTCAAGGTGTTCGAGGACAACG GCCTGGTGCGCGCCATGCTGGAGCAGCCGGGCGAGGGGCGCGTGCTGGTCGTCGACGGCGGCGGCTCGCTGCGCTGCGCG CTGGTGGGCGGCAACCTCGCCAAGCTGGCCGAGGACAACGGCTGGGAGGGTGTCCTCGTCAACGGCTGTGTGCGCGATAC CCGCGAGCTGGCCGCCTGCAACGTCGGCGTGCATGCCCTGGCCGCGCATCCGCGCAAGAGCTTCAAGAAAAACCAGGGCG AGCGCGACATCGGCGTGCAGATGCCCGGCGCCTACATCCACCCGGGCGAATGGATCTACGGCGACGAAGATGGCGTGCTG GTCTCGCGGGAGCGGTTGCATGACTGA
Upstream 100 bases:
>100_bases AGTGCAGACCGATCCGGAGATCATCAGCCCGCGCGCAACCCTGCAATCGCTGCGTGCGCAGGCGCGCGGCTGAACCCGTT CCATCCACGCCGACACCGCC
Downstream 100 bases:
>100_bases GGCCATCCACGTCTTCGCCTACGGCACGCTGCGCGCGGGCGAGGCCAACGACCTGCGCGTCGCCGCGTCCCGGCGCGGTA TCGCCGAGCCGAAGCTGATC
Product: ribonuclease activity regulator protein RraA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 168; Mature: 167
Protein sequence:
>168_residues MTTMMIPVTDLCDAHEDQLASGAVRVLAPVFRSFGARAAFAGPAATLKVFEDNGLVRAMLEQPGEGRVLVVDGGGSLRCA LVGGNLAKLAEDNGWEGVLVNGCVRDTRELAACNVGVHALAAHPRKSFKKNQGERDIGVQMPGAYIHPGEWIYGDEDGVL VSRERLHD
Sequences:
>Translated_168_residues MTTMMIPVTDLCDAHEDQLASGAVRVLAPVFRSFGARAAFAGPAATLKVFEDNGLVRAMLEQPGEGRVLVVDGGGSLRCA LVGGNLAKLAEDNGWEGVLVNGCVRDTRELAACNVGVHALAAHPRKSFKKNQGERDIGVQMPGAYIHPGEWIYGDEDGVL VSRERLHD >Mature_167_residues TTMMIPVTDLCDAHEDQLASGAVRVLAPVFRSFGARAAFAGPAATLKVFEDNGLVRAMLEQPGEGRVLVVDGGGSLRCAL VGGNLAKLAEDNGWEGVLVNGCVRDTRELAACNVGVHALAAHPRKSFKKNQGERDIGVQMPGAYIHPGEWIYGDEDGVLV SRERLHD
Specific function: Regulator Of Rnase E/Rne, Which Inhibits The Endonuclease Activity And Thereby Leads To Increase The Half-Life And Abundance Of Rnas. General Modulator Of RNA Abundance. Does Not Have Any Methyltransferase Activity. [C]
COG id: COG0684
COG function: function code H; Demethylmenaquinone methyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the RraA family [H]
Homologues:
Organism=Escherichia coli, GI1790364, Length=163, Percent_Identity=42.3312883435583, Blast_Score=133, Evalue=6e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005493 - InterPro: IPR010203 [H]
Pfam domain/function: PF03737 Methyltransf_6 [H]
EC number: NA
Molecular weight: Translated: 17894; Mature: 17762
Theoretical pI: Translated: 5.60; Mature: 5.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTMMIPVTDLCDAHEDQLASGAVRVLAPVFRSFGARAAFAGPAATLKVFEDNGLVRAML CCEEEEEHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCEECCCCCEEEEEEECCCEEEHHH EQPGEGRVLVVDGGGSLRCALVGGNLAKLAEDNGWEGVLVNGCVRDTRELAACNVGVHAL CCCCCCEEEEEECCCCEEEEEECCCEEEHHCCCCCCEEEEECCHHHHHHHHHHCCCHHHH AAHPRKSFKKNQGERDIGVQMPGAYIHPGEWIYGDEDGVLVSRERLHD HCCCHHHHHHCCCCCCCCEECCCCEECCCCEEEECCCCEEECHHHCCC >Mature Secondary Structure TTMMIPVTDLCDAHEDQLASGAVRVLAPVFRSFGARAAFAGPAATLKVFEDNGLVRAML CEEEEEHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCEECCCCCEEEEEEECCCEEEHHH EQPGEGRVLVVDGGGSLRCALVGGNLAKLAEDNGWEGVLVNGCVRDTRELAACNVGVHAL CCCCCCEEEEEECCCCEEEEEECCCEEEHHCCCCCCEEEEECCHHHHHHHHHHCCCHHHH AAHPRKSFKKNQGERDIGVQMPGAYIHPGEWIYGDEDGVLVSRERLHD HCCCHHHHHHCCCCCCCCEECCCCEECCCCEEEECCCCEEECHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11823852 [H]