| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is ilvG [H]
Identifier: 17546072
GI number: 17546072
Start: 1440421
End: 1442166
Strand: Direct
Name: ilvG [H]
Synonym: RSc1353
Alternate gene names: 17546072
Gene position: 1440421-1442166 (Clockwise)
Preceding gene: 17546071
Following gene: 17546073
Centisome position: 38.76
GC content: 72.16
Gene sequence:
>1746_bases ATGGAGACAGCCGTTGCCCGCCCGGTATCCACCGGCCCCACCGATTCCACCGATTCCGGTTCCCGTCCGGTCCCCCGGCA CGGCGGACAGATCCTGGTCGATGCCCTGATCGCCCATGGCACGGACCTCGCCTTCGGCGTGCCGGGCGAGAGCTACCTGG CCGTGCTGGAAGGCTTCTACCAGCGGCGCGACCGCGCGCGCTTCATCGTATGCCGGCAGGAGGGCGGGGCCGCCACCATG GCCGACGCCCATGGCAAGCTGACCGGTCGCCCCGGCATCGTGTTCTGCACGCGCGGCCCCGGGGCGACCAACGCTAGCAT CGGCGTGCACACCGCGTTCCAGGATTCCACGCCGCTGATCCTTTTCATTGGCCAGGTCGGCCGCGACTGCGTCGACCGCG AAGCCTTCCAGGAGATCGACTACCGCCGCATGTTCGGCCAGATGGCCAAGTGGGTTGCGCAGATCGACAGCGTCGAGCGC ATCCCCGAATACATCGCGCGCGCCTTCCAGACCGCGACGGCGGGGCGCCCCGGCCCGGTGGTGCTGGCGCTGCCCGAAGA CATGCTCACCCAGGTCGCCACCGTGGCCGACGTGCCGCCGATGCCGCGCGCGATGGCGTGGCCCGCGCCGCACGATCTGG CGCGGCTCAAGGCCCTGCTGGGCCGCGCCGAGCGCCCGCTGCTGCTGCTGGGCGGCGCCGGCTGGACGCCGCAGGCCGCC GCGCGCCTGCAGGCCTTCGCCGAGCGCTGGCGCTTGCCGGTGGGCTGCGTGTTCCGCCGGCAGGATCTGTTCGACAACCG CCATCCGAACTACGCCGGCGATGTCGGCATCGCCATCAACCCGAAGCTGGCGGCGCGCGTGCGCGAGGCGGACGTGGTGC TCGCCATCGGCACGCGCCTGGGCGAGATGGCGACTTCGGGCTACACGCTGTTCGACGTGCCGCGCCCGCGGCAGACGCTG ATCCACGTGCACGCCGGCGCCGAAGAGCTGGGCCGCGTCTACCAGGCCGATCTGATGATCCACGCGGCGATGCCCGCCAT CGGCGAGGCGCTGGACGGCGTCGCGCCCGATGCGCCGCCGCGCTGGCAGGCCTGGACCGAGGCCGCGCATGCGGACTACC TCGCCAACATCGCGCCGCCGCCGTTCGCCGGGCGGGGCATCGATCTGGCCCGCGCGATGCAATGGCTGCGCGAGCGCCTG CCGCGCAACGCCATCCTGACCAACGGCGCGGGCAACTACGCCACCTGGCTGCATCGCTTCTACCAGTACGGGCCGCTGGC CGCCGGCTCGCGCACCCAGCTCGCGCCGACCAGCGGGGCGATGGGCTATGGCGCCCCGGCGGCCGTGGCGGCCAAGATCG CCTGTCCGCAGACGCCCGTGATCTGCCTCGCCGGCGACGGCTGCTTCCTGATGAACGGCCAGGAGCTGGCGACCGCCATG CAGTACGACGCGCCGGTGATCTTCATCGTGGTCAACAACGGCATGTACGGCACCATTCGCATGCACCAGGAGCGCGCGTA TCCGGAACACGTGAGCGGCACCGAGCTGCGCAACCCGGACTTCGCCGCGCTGGCGCGCGCCTACGGCGCCGAGGGCCACA CCGTGCGTTCGCTGGAGGGCTTCCAGGCCGCGGTGGAGGCGGCGCTGGCGGTCCCGGTGGCCACCGTCATCGAAGTGCAG ACCGATCCGGAGATCATCAGCCCGCGCGCAACCCTGCAATCGCTGCGTGCGCAGGCGCGCGGCTGA
Upstream 100 bases:
>100_bases GTTCCGGCAGATGTAGCGTCCCCATTCGGGGGTGTGCGCGGGCCGTCCTTCCGCTATGCTCGGTTGTATCGTCAACGAAT CGATAGCGAGACGACCCGCC
Downstream 100 bases:
>100_bases ACCCGTTCCATCCACGCCGACACCGCCATGACGACGATGATGATTCCCGTGACCGACCTGTGCGACGCGCACGAAGACCA GCTCGCCAGCGGCGCCGTGC
Product: thiamine pyrophosphate protein
Products: NA
Alternate protein names: AHAS; Acetohydroxy-acid synthase large subunit; ALS [H]
Number of amino acids: Translated: 581; Mature: 581
Protein sequence:
>581_residues METAVARPVSTGPTDSTDSGSRPVPRHGGQILVDALIAHGTDLAFGVPGESYLAVLEGFYQRRDRARFIVCRQEGGAATM ADAHGKLTGRPGIVFCTRGPGATNASIGVHTAFQDSTPLILFIGQVGRDCVDREAFQEIDYRRMFGQMAKWVAQIDSVER IPEYIARAFQTATAGRPGPVVLALPEDMLTQVATVADVPPMPRAMAWPAPHDLARLKALLGRAERPLLLLGGAGWTPQAA ARLQAFAERWRLPVGCVFRRQDLFDNRHPNYAGDVGIAINPKLAARVREADVVLAIGTRLGEMATSGYTLFDVPRPRQTL IHVHAGAEELGRVYQADLMIHAAMPAIGEALDGVAPDAPPRWQAWTEAAHADYLANIAPPPFAGRGIDLARAMQWLRERL PRNAILTNGAGNYATWLHRFYQYGPLAAGSRTQLAPTSGAMGYGAPAAVAAKIACPQTPVICLAGDGCFLMNGQELATAM QYDAPVIFIVVNNGMYGTIRMHQERAYPEHVSGTELRNPDFAALARAYGAEGHTVRSLEGFQAAVEAALAVPVATVIEVQ TDPEIISPRATLQSLRAQARG
Sequences:
>Translated_581_residues METAVARPVSTGPTDSTDSGSRPVPRHGGQILVDALIAHGTDLAFGVPGESYLAVLEGFYQRRDRARFIVCRQEGGAATM ADAHGKLTGRPGIVFCTRGPGATNASIGVHTAFQDSTPLILFIGQVGRDCVDREAFQEIDYRRMFGQMAKWVAQIDSVER IPEYIARAFQTATAGRPGPVVLALPEDMLTQVATVADVPPMPRAMAWPAPHDLARLKALLGRAERPLLLLGGAGWTPQAA ARLQAFAERWRLPVGCVFRRQDLFDNRHPNYAGDVGIAINPKLAARVREADVVLAIGTRLGEMATSGYTLFDVPRPRQTL IHVHAGAEELGRVYQADLMIHAAMPAIGEALDGVAPDAPPRWQAWTEAAHADYLANIAPPPFAGRGIDLARAMQWLRERL PRNAILTNGAGNYATWLHRFYQYGPLAAGSRTQLAPTSGAMGYGAPAAVAAKIACPQTPVICLAGDGCFLMNGQELATAM QYDAPVIFIVVNNGMYGTIRMHQERAYPEHVSGTELRNPDFAALARAYGAEGHTVRSLEGFQAAVEAALAVPVATVIEVQ TDPEIISPRATLQSLRAQARG >Mature_581_residues METAVARPVSTGPTDSTDSGSRPVPRHGGQILVDALIAHGTDLAFGVPGESYLAVLEGFYQRRDRARFIVCRQEGGAATM ADAHGKLTGRPGIVFCTRGPGATNASIGVHTAFQDSTPLILFIGQVGRDCVDREAFQEIDYRRMFGQMAKWVAQIDSVER IPEYIARAFQTATAGRPGPVVLALPEDMLTQVATVADVPPMPRAMAWPAPHDLARLKALLGRAERPLLLLGGAGWTPQAA ARLQAFAERWRLPVGCVFRRQDLFDNRHPNYAGDVGIAINPKLAARVREADVVLAIGTRLGEMATSGYTLFDVPRPRQTL IHVHAGAEELGRVYQADLMIHAAMPAIGEALDGVAPDAPPRWQAWTEAAHADYLANIAPPPFAGRGIDLARAMQWLRERL PRNAILTNGAGNYATWLHRFYQYGPLAAGSRTQLAPTSGAMGYGAPAAVAAKIACPQTPVICLAGDGCFLMNGQELATAM QYDAPVIFIVVNNGMYGTIRMHQERAYPEHVSGTELRNPDFAALARAYGAEGHTVRSLEGFQAAVEAALAVPVATVIEVQ TDPEIISPRATLQSLRAQARG
Specific function: Valine and isoleucine biosynthesis; first step. [C]
COG id: COG0028
COG function: function code EH; Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TPP enzyme family [H]
Homologues:
Organism=Homo sapiens, GI93004078, Length=569, Percent_Identity=25.6590509666081, Blast_Score=150, Evalue=3e-36, Organism=Homo sapiens, GI21361361, Length=554, Percent_Identity=26.3537906137184, Blast_Score=128, Evalue=2e-29, Organism=Escherichia coli, GI87081685, Length=544, Percent_Identity=27.7573529411765, Blast_Score=208, Evalue=7e-55, Organism=Escherichia coli, GI1790104, Length=545, Percent_Identity=28.6238532110092, Blast_Score=197, Evalue=1e-51, Organism=Escherichia coli, GI1786717, Length=572, Percent_Identity=26.9230769230769, Blast_Score=145, Evalue=6e-36, Organism=Escherichia coli, GI1788716, Length=574, Percent_Identity=23.6933797909408, Blast_Score=108, Evalue=7e-25, Organism=Escherichia coli, GI1787096, Length=560, Percent_Identity=23.5714285714286, Blast_Score=97, Evalue=3e-21, Organism=Caenorhabditis elegans, GI17531301, Length=554, Percent_Identity=26.3537906137184, Blast_Score=142, Evalue=5e-34, Organism=Caenorhabditis elegans, GI17531299, Length=572, Percent_Identity=26.2237762237762, Blast_Score=142, Evalue=6e-34, Organism=Caenorhabditis elegans, GI17542570, Length=584, Percent_Identity=23.1164383561644, Blast_Score=105, Evalue=4e-23, Organism=Saccharomyces cerevisiae, GI6323755, Length=575, Percent_Identity=27.304347826087, Blast_Score=224, Evalue=2e-59, Organism=Saccharomyces cerevisiae, GI6320816, Length=561, Percent_Identity=20.855614973262, Blast_Score=85, Evalue=4e-17, Organism=Saccharomyces cerevisiae, GI6323073, Length=534, Percent_Identity=21.9101123595506, Blast_Score=74, Evalue=7e-14, Organism=Drosophila melanogaster, GI19922626, Length=564, Percent_Identity=26.9503546099291, Blast_Score=141, Evalue=1e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012846 - InterPro: IPR012000 - InterPro: IPR012001 - InterPro: IPR000399 - InterPro: IPR011766 [H]
Pfam domain/function: PF02775 TPP_enzyme_C; PF00205 TPP_enzyme_M; PF02776 TPP_enzyme_N [H]
EC number: =2.2.1.6 [H]
Molecular weight: Translated: 62450; Mature: 62450
Theoretical pI: Translated: 7.40; Mature: 7.40
Prosite motif: PS00187 TPP_ENZYMES
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METAVARPVSTGPTDSTDSGSRPVPRHGGQILVDALIAHGTDLAFGVPGESYLAVLEGFY CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEECCCCHHHHHHHHHHH QRRDRARFIVCRQEGGAATMADAHGKLTGRPGIVFCTRGPGATNASIGVHTAFQDSTPLI HHCCCCEEEEEECCCCCEEEECCCCCCCCCCCEEEEECCCCCCCCCCEEEEEECCCCCEE LFIGQVGRDCVDREAFQEIDYRRMFGQMAKWVAQIDSVERIPEYIARAFQTATAGRPGPV EEECHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCE VLALPEDMLTQVATVADVPPMPRAMAWPAPHDLARLKALLGRAERPLLLLGGAGWTPQAA EEECCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEECCCCCHHHH ARLQAFAERWRLPVGCVFRRQDLFDNRHPNYAGDVGIAINPKLAARVREADVVLAIGTRL HHHHHHHHHHCCCHHHEEEHHHHHCCCCCCCCCCEEEEECCHHHHHHHHCCEEEEECHHH GEMATSGYTLFDVPRPRQTLIHVHAGAEELGRVYQADLMIHAAMPAIGEALDGVAPDAPP HHHHCCCEEEEECCCCHHEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC RWQAWTEAAHADYLANIAPPPFAGRGIDLARAMQWLRERLPRNAILTNGAGNYATWLHRF CCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHH YQYGPLAAGSRTQLAPTSGAMGYGAPAAVAAKIACPQTPVICLAGDGCFLMNGQELATAM HHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEECCCEEEECCHHHHHHH QYDAPVIFIVVNNGMYGTIRMHQERAYPEHVSGTELRNPDFAALARAYGAEGHTVRSLEG HCCCCEEEEEECCCEEEEEEEECHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCEEHHHHH FQAAVEAALAVPVATVIEVQTDPEIISPRATLQSLRAQARG HHHHHHHHHHCCEEEEEEECCCCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure METAVARPVSTGPTDSTDSGSRPVPRHGGQILVDALIAHGTDLAFGVPGESYLAVLEGFY CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEECCCCHHHHHHHHHHH QRRDRARFIVCRQEGGAATMADAHGKLTGRPGIVFCTRGPGATNASIGVHTAFQDSTPLI HHCCCCEEEEEECCCCCEEEECCCCCCCCCCCEEEEECCCCCCCCCCEEEEEECCCCCEE LFIGQVGRDCVDREAFQEIDYRRMFGQMAKWVAQIDSVERIPEYIARAFQTATAGRPGPV EEECHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCE VLALPEDMLTQVATVADVPPMPRAMAWPAPHDLARLKALLGRAERPLLLLGGAGWTPQAA EEECCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEECCCCCHHHH ARLQAFAERWRLPVGCVFRRQDLFDNRHPNYAGDVGIAINPKLAARVREADVVLAIGTRL HHHHHHHHHHCCCHHHEEEHHHHHCCCCCCCCCCEEEEECCHHHHHHHHCCEEEEECHHH GEMATSGYTLFDVPRPRQTLIHVHAGAEELGRVYQADLMIHAAMPAIGEALDGVAPDAPP HHHHCCCEEEEECCCCHHEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC RWQAWTEAAHADYLANIAPPPFAGRGIDLARAMQWLRERLPRNAILTNGAGNYATWLHRF CCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHH YQYGPLAAGSRTQLAPTSGAMGYGAPAAVAAKIACPQTPVICLAGDGCFLMNGQELATAM HHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEECCCEEEECCHHHHHHH QYDAPVIFIVVNNGMYGTIRMHQERAYPEHVSGTELRNPDFAALARAYGAEGHTVRSLEG HCCCCEEEEEECCCEEEEEEEECHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCEEHHHHH FQAAVEAALAVPVATVIEVQTDPEIISPRATLQSLRAQARG HHHHHHHHHHCCEEEEEEECCCCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12917641 [H]