| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is pit [H]
Identifier: 17546032
GI number: 17546032
Start: 1397981
End: 1398991
Strand: Direct
Name: pit [H]
Synonym: RSc1313
Alternate gene names: 17546032
Gene position: 1397981-1398991 (Clockwise)
Preceding gene: 17546031
Following gene: 17546045
Centisome position: 37.62
GC content: 65.28
Gene sequence:
>1011_bases ATGCACACACTCCAGATCAGTCTTTGGGTGGTTGTCCTGCTGGTGGCGCTGGCCATCCTGTTCGATTTCATGAACGGCTT CCACGATGCGGCCAACTCCATTGCCACGGTGGTGTCGACCGGCGTGCTCAAGCCGCAGCAGGCGGTGGCGATGGCCGCGG CCTGCAACGTGATCGCCATTTTCATCTTTCACCTCAAGGTCGCGACGACGGTGGGGCGCGACACCATCGACCCGAGCATC GTCGATCACTACGTCATTTTCGGTGCCCTGGTGGGGGCGATCGCCTGGAACATCGTCACCTGGTATTACGGCATTCCGTC GAGCTCGTCGCATGCGCTGATCGGCGGGCTGGTGGGGGCGGCCGTGGCCAAGTCGGGCACGGGCTCGCTGGTGGCCAGCG GTCTGCTGAAGACGGTGGCGTTCATCCTGATTTCGCCGCTGCTGGGGTTCATCCTCGGCTCCTGCCTGATGATCGCGGTG TCCTGGCTGTTCTTCCGCACGCCGCCTTCCAAGGTGGACCGCTGGTTCCGGCGGCTGCAGTTGCTGTCGGCGTCGCTGTA CAGCTTGGGCCACGGCGGCAACGATGCGCAGAAGACCATCGGCATCATCTGGATGCTGCTGATCGCCGGGGGGTATGCCT CGGCCACGGCAAGCACGCCGCCGATCTGGGTGATCGTGTGCTGCTACGTGGCGATCGGCATGGGCACGCTGCTGGGCGGC TGGCGCATCGTCCGGACCATGGGGCAGAAGATCACCAAGCTCAAGCCGGTGGGCGGTTTCTGCGCTGAAACCGGTGGCGC GCTGACGCTGTTCTTTGCTTCGGCGCTGGGCGTGCCGGTTTCGACCACGCATACCATCACCGGCGCCATTGTCGGCGTGG GCGCGGCACAGAAGGCTTCGGCCGTGCGCTGGGGCGTCGCGGGCAATATCGTCTGGGCGTGGGTCCTGACGATCCCGGCG TCGGCCTTCATGGCGGCGATCGCCTGGTGGATCGGACGGCAGTTGCTCTGA
Upstream 100 bases:
>100_bases CGATCTACGAGCAACTGGAGAGCATCACCGATCGTTGCGAGGATGTCGCCAACATCATCGAAGGCATCGTGCTCGAGAAC GCCTGACGAGACGACGCCTC
Downstream 100 bases:
>100_bases ACCTGCCGCAGCCGTTCAAACAGAAACGCCCACCATCCGGTGGGCGTTTTGTTTGGTGCAGCAGGCGCTTATTGCGTGGC GAAGCGTGCGATCGGGTCAT
Product: inorganic phosphate transporter
Products: Proton [Cytoplasm]; phosphate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 336; Mature: 336
Protein sequence:
>336_residues MHTLQISLWVVVLLVALAILFDFMNGFHDAANSIATVVSTGVLKPQQAVAMAAACNVIAIFIFHLKVATTVGRDTIDPSI VDHYVIFGALVGAIAWNIVTWYYGIPSSSSHALIGGLVGAAVAKSGTGSLVASGLLKTVAFILISPLLGFILGSCLMIAV SWLFFRTPPSKVDRWFRRLQLLSASLYSLGHGGNDAQKTIGIIWMLLIAGGYASATASTPPIWVIVCCYVAIGMGTLLGG WRIVRTMGQKITKLKPVGGFCAETGGALTLFFASALGVPVSTTHTITGAIVGVGAAQKASAVRWGVAGNIVWAWVLTIPA SAFMAAIAWWIGRQLL
Sequences:
>Translated_336_residues MHTLQISLWVVVLLVALAILFDFMNGFHDAANSIATVVSTGVLKPQQAVAMAAACNVIAIFIFHLKVATTVGRDTIDPSI VDHYVIFGALVGAIAWNIVTWYYGIPSSSSHALIGGLVGAAVAKSGTGSLVASGLLKTVAFILISPLLGFILGSCLMIAV SWLFFRTPPSKVDRWFRRLQLLSASLYSLGHGGNDAQKTIGIIWMLLIAGGYASATASTPPIWVIVCCYVAIGMGTLLGG WRIVRTMGQKITKLKPVGGFCAETGGALTLFFASALGVPVSTTHTITGAIVGVGAAQKASAVRWGVAGNIVWAWVLTIPA SAFMAAIAWWIGRQLL >Mature_336_residues MHTLQISLWVVVLLVALAILFDFMNGFHDAANSIATVVSTGVLKPQQAVAMAAACNVIAIFIFHLKVATTVGRDTIDPSI VDHYVIFGALVGAIAWNIVTWYYGIPSSSSHALIGGLVGAAVAKSGTGSLVASGLLKTVAFILISPLLGFILGSCLMIAV SWLFFRTPPSKVDRWFRRLQLLSASLYSLGHGGNDAQKTIGIIWMLLIAGGYASATASTPPIWVIVCCYVAIGMGTLLGG WRIVRTMGQKITKLKPVGGFCAETGGALTLFFASALGVPVSTTHTITGAIVGVGAAQKASAVRWGVAGNIVWAWVLTIPA SAFMAAIAWWIGRQLL
Specific function: Low-affinity inorganic phosphate transport (Probable) [H]
COG id: COG0306
COG function: function code P; Phosphate/sulphate permeases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the inorganic phosphate transporter (PiT) (TC 2.A.20) family. Pit subfamily [H]
Homologues:
Organism=Homo sapiens, GI31543630, Length=165, Percent_Identity=35.7575757575758, Blast_Score=102, Evalue=7e-22, Organism=Homo sapiens, GI5803173, Length=154, Percent_Identity=37.012987012987, Blast_Score=99, Evalue=4e-21, Organism=Escherichia coli, GI1789907, Length=218, Percent_Identity=31.1926605504587, Blast_Score=96, Evalue=2e-21, Organism=Escherichia coli, GI1789360, Length=219, Percent_Identity=31.0502283105023, Blast_Score=94, Evalue=1e-20, Organism=Caenorhabditis elegans, GI17539280, Length=169, Percent_Identity=36.094674556213, Blast_Score=101, Evalue=6e-22, Organism=Caenorhabditis elegans, GI25146401, Length=162, Percent_Identity=30.8641975308642, Blast_Score=96, Evalue=2e-20, Organism=Caenorhabditis elegans, GI71981576, Length=162, Percent_Identity=29.6296296296296, Blast_Score=92, Evalue=3e-19, Organism=Caenorhabditis elegans, GI32566716, Length=175, Percent_Identity=30.8571428571429, Blast_Score=92, Evalue=6e-19, Organism=Caenorhabditis elegans, GI17536725, Length=186, Percent_Identity=29.5698924731183, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI17557328, Length=169, Percent_Identity=32.5443786982249, Blast_Score=84, Evalue=9e-17, Organism=Saccharomyces cerevisiae, GI6319773, Length=165, Percent_Identity=30.9090909090909, Blast_Score=74, Evalue=2e-14, Organism=Drosophila melanogaster, GI21356511, Length=189, Percent_Identity=30.6878306878307, Blast_Score=91, Evalue=9e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001204 [H]
Pfam domain/function: PF01384 PHO4 [H]
EC number: NA
Molecular weight: Translated: 35284; Mature: 35284
Theoretical pI: Translated: 10.16; Mature: 10.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHTLQISLWVVVLLVALAILFDFMNGFHDAANSIATVVSTGVLKPQQAVAMAAACNVIAI CCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH FIFHLKVATTVGRDTIDPSIVDHYVIFGALVGAIAWNIVTWYYGIPSSSSHALIGGLVGA HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH AVAKSGTGSLVASGLLKTVAFILISPLLGFILGSCLMIAVSWLFFRTPPSKVDRWFRRLQ HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH LLSASLYSLGHGGNDAQKTIGIIWMLLIAGGYASATASTPPIWVIVCCYVAIGMGTLLGG HHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH WRIVRTMGQKITKLKPVGGFCAETGGALTLFFASALGVPVSTTHTITGAIVGVGAAQKAS HHHHHHHHHHHHHCCCCCCHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHH AVRWGVAGNIVWAWVLTIPASAFMAAIAWWIGRQLL HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MHTLQISLWVVVLLVALAILFDFMNGFHDAANSIATVVSTGVLKPQQAVAMAAACNVIAI CCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH FIFHLKVATTVGRDTIDPSIVDHYVIFGALVGAIAWNIVTWYYGIPSSSSHALIGGLVGA HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH AVAKSGTGSLVASGLLKTVAFILISPLLGFILGSCLMIAVSWLFFRTPPSKVDRWFRRLQ HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH LLSASLYSLGHGGNDAQKTIGIIWMLLIAGGYASATASTPPIWVIVCCYVAIGMGTLLGG HHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH WRIVRTMGQKITKLKPVGGFCAETGGALTLFFASALGVPVSTTHTITGAIVGVGAAQKAS HHHHHHHHHHHHHCCCCCCHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHH AVRWGVAGNIVWAWVLTIPASAFMAAIAWWIGRQLL HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; phosphate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + phosphate [Periplasm] = Proton [Cytoplasm] + phosphate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9696772; 11481430 [H]