| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is caiD [C]
Identifier: 17546017
GI number: 17546017
Start: 1384111
End: 1385241
Strand: Direct
Name: caiD [C]
Synonym: RSc1298
Alternate gene names: 17546017
Gene position: 1384111-1385241 (Clockwise)
Preceding gene: 17546015
Following gene: 17546018
Centisome position: 37.24
GC content: 71.09
Gene sequence:
>1131_bases ATGGAATCCACCGCATCGACCGCTTCCTCGACTGTTTCCGCCGCCACGCAGACCGACACCCAGGCCCACGTGATCGCCGA GGTGCACGGCGGCATCGGCTGGCTGACGCTGAACCGGCCGCAGGCGCTCAATGCGCTGTCGCTGGAGATGATTCGCGCGC TGTCGCATGCGCTGATGGCGTGGCAGCACGATCCGGCGGTGCGCGCCGTGATCCTGCGCGGCGAGGGCGGCAAGGCGCTG TGCGCCGGGGGCGACATCCGTTTTTTCCACCGCGCCGCCACCGCGCGCGATCCGCAACTGATCACCTTCTTCGCCGAGGA ATACCGCCTCAACCACCTGATCTTCCGCTACGCCAAGCCCTATATCGCGCTGATGGACGGCGTGGTGATGGGCGGCGGCA TGGGCATCTCGCAGGGCGCTTCGCTGCGCGTGGTGACCGGGCGCACGCGCATGGCCATGCCTGAGACCAACATCGGCCTG TTTCCCGATGTCGGGGGTGGCTGGTTCCTGGCGCGCCTGCCGGGGCACGTGGGCGAATACCTGGGGGTGACCGGGCAGGT GATCGACGCGGCGGACGCGTTGTCGGTCGGCCTGGCCGATTGCCATGTGCCGGCGGACACTCTGGCCGCCGTGGTCCGCC GCCTGCGCGACGGCACCTGGCAGCGCGCCGAGCAGATCGCCGCCTGCTTCGCCGAGGCCGCGACCGATCCCGACGCGACC CGGGCCGTGATCGCGCCGCACCGTGCCGCCATCGACGCGTGCTTTAGCCAGGCCACGGTGCCCGCCATCCTCGCCGACCT GGCCGGCAGCCCCGATGCCGGCTGGGCTGCGCAGACCGGGCAGCAGATGGCCCGGCGCTCACCGCTGATGATGGCGGTCA CGCTCGAGCAGATCCGCCGCGGCCGCCACACCACGCTCGCCGACGAACTGCGCCGCGAACTGGACATGATGGCGCGCGTG TTCGACGCTGGCGACGGCATCGAAGGCATCCGCGCGCTGGCCGTCGACAAGGACCATGCGCCCCGGTGGCAGCACGCCAG CGTCGACGCCGTGCGCGAAGACGAGGTGGCCGCGTTCTTCGCATCGCCGTGGCGGCGCGAGCAGCATCCGCTGCTGGGGC TGTCGGACTAG
Upstream 100 bases:
>100_bases CGTCCGCAAAGAGGGCCGGCTAGAGCCCTTCCTCGCAAACCTGCCGGCTCGTGTACAGTGCGAGCCGTCATTCCCGTAAC GACAGGCACAGACGCGAGAC
Downstream 100 bases:
>100_bases AACCGGTAAACTTGCGCGCCTGAACCGAATTACCGAATTGCCGTGTCTGCTGAACGCTCTACGCCGAATCCGCGTCGCCT GTCCGTTGCCCCGATGATGG
Product: 3-hydroxyisobutyryl-CoA hydrolase
Products: NA
Alternate protein names: 3-hydroxypropionyl-CoA dehydratase [H]
Number of amino acids: Translated: 376; Mature: 376
Protein sequence:
>376_residues MESTASTASSTVSAATQTDTQAHVIAEVHGGIGWLTLNRPQALNALSLEMIRALSHALMAWQHDPAVRAVILRGEGGKAL CAGGDIRFFHRAATARDPQLITFFAEEYRLNHLIFRYAKPYIALMDGVVMGGGMGISQGASLRVVTGRTRMAMPETNIGL FPDVGGGWFLARLPGHVGEYLGVTGQVIDAADALSVGLADCHVPADTLAAVVRRLRDGTWQRAEQIAACFAEAATDPDAT RAVIAPHRAAIDACFSQATVPAILADLAGSPDAGWAAQTGQQMARRSPLMMAVTLEQIRRGRHTTLADELRRELDMMARV FDAGDGIEGIRALAVDKDHAPRWQHASVDAVREDEVAAFFASPWRREQHPLLGLSD
Sequences:
>Translated_376_residues MESTASTASSTVSAATQTDTQAHVIAEVHGGIGWLTLNRPQALNALSLEMIRALSHALMAWQHDPAVRAVILRGEGGKAL CAGGDIRFFHRAATARDPQLITFFAEEYRLNHLIFRYAKPYIALMDGVVMGGGMGISQGASLRVVTGRTRMAMPETNIGL FPDVGGGWFLARLPGHVGEYLGVTGQVIDAADALSVGLADCHVPADTLAAVVRRLRDGTWQRAEQIAACFAEAATDPDAT RAVIAPHRAAIDACFSQATVPAILADLAGSPDAGWAAQTGQQMARRSPLMMAVTLEQIRRGRHTTLADELRRELDMMARV FDAGDGIEGIRALAVDKDHAPRWQHASVDAVREDEVAAFFASPWRREQHPLLGLSD >Mature_376_residues MESTASTASSTVSAATQTDTQAHVIAEVHGGIGWLTLNRPQALNALSLEMIRALSHALMAWQHDPAVRAVILRGEGGKAL CAGGDIRFFHRAATARDPQLITFFAEEYRLNHLIFRYAKPYIALMDGVVMGGGMGISQGASLRVVTGRTRMAMPETNIGL FPDVGGGWFLARLPGHVGEYLGVTGQVIDAADALSVGLADCHVPADTLAAVVRRLRDGTWQRAEQIAACFAEAATDPDAT RAVIAPHRAAIDACFSQATVPAILADLAGSPDAGWAAQTGQQMARRSPLMMAVTLEQIRRGRHTTLADELRRELDMMARV FDAGDGIEGIRALAVDKDHAPRWQHASVDAVREDEVAAFFASPWRREQHPLLGLSD
Specific function: Plays a role in autotrophic carbon fixation via the 3- hydroxypropionate/4-hydroxybutyrate cycle. Catalyzes the reversible dehydration of 3-hydroxypropionyl-CoA to form acryloyl- CoA, and the reversible dehydration of (S)-3-hydroxybutyryl-CoA to form crot
COG id: COG1024
COG function: function code I; Enoyl-CoA hydratase/carnithine racemase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the enoyl-CoA hydratase/isomerase family [H]
Homologues:
Organism=Homo sapiens, GI37594471, Length=351, Percent_Identity=37.3219373219373, Blast_Score=243, Evalue=2e-64, Organism=Homo sapiens, GI37594469, Length=302, Percent_Identity=38.4105960264901, Blast_Score=212, Evalue=3e-55, Organism=Homo sapiens, GI194097323, Length=242, Percent_Identity=30.5785123966942, Blast_Score=91, Evalue=2e-18, Organism=Homo sapiens, GI68989263, Length=237, Percent_Identity=26.5822784810127, Blast_Score=70, Evalue=4e-12, Organism=Homo sapiens, GI20127408, Length=238, Percent_Identity=27.3109243697479, Blast_Score=68, Evalue=2e-11, Organism=Homo sapiens, GI4502327, Length=184, Percent_Identity=28.804347826087, Blast_Score=66, Evalue=7e-11, Organism=Escherichia coli, GI221142681, Length=188, Percent_Identity=29.7872340425532, Blast_Score=69, Evalue=4e-13, Organism=Escherichia coli, GI1787660, Length=196, Percent_Identity=30.6122448979592, Blast_Score=68, Evalue=1e-12, Organism=Escherichia coli, GI1788597, Length=197, Percent_Identity=28.4263959390863, Blast_Score=65, Evalue=6e-12, Organism=Caenorhabditis elegans, GI25144157, Length=361, Percent_Identity=38.2271468144044, Blast_Score=236, Evalue=2e-62, Organism=Caenorhabditis elegans, GI25144160, Length=361, Percent_Identity=38.2271468144044, Blast_Score=236, Evalue=2e-62, Organism=Caenorhabditis elegans, GI17540714, Length=180, Percent_Identity=29.4444444444444, Blast_Score=80, Evalue=2e-15, Organism=Caenorhabditis elegans, GI17554946, Length=187, Percent_Identity=28.3422459893048, Blast_Score=72, Evalue=5e-13, Organism=Caenorhabditis elegans, GI25145438, Length=182, Percent_Identity=29.1208791208791, Blast_Score=66, Evalue=3e-11, Organism=Saccharomyces cerevisiae, GI6320241, Length=343, Percent_Identity=29.1545189504373, Blast_Score=143, Evalue=5e-35, Organism=Drosophila melanogaster, GI28571729, Length=358, Percent_Identity=36.3128491620112, Blast_Score=224, Evalue=7e-59, Organism=Drosophila melanogaster, GI28571730, Length=358, Percent_Identity=36.3128491620112, Blast_Score=224, Evalue=8e-59, Organism=Drosophila melanogaster, GI20129971, Length=205, Percent_Identity=30.2439024390244, Blast_Score=87, Evalue=1e-17, Organism=Drosophila melanogaster, GI24653477, Length=205, Percent_Identity=30.2439024390244, Blast_Score=87, Evalue=1e-17, Organism=Drosophila melanogaster, GI24653139, Length=220, Percent_Identity=29.5454545454545, Blast_Score=78, Evalue=8e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014748 - InterPro: IPR001753 - InterPro: IPR018376 [H]
Pfam domain/function: PF00378 ECH [H]
EC number: =4.2.1.116 [H]
Molecular weight: Translated: 40384; Mature: 40384
Theoretical pI: Translated: 6.45; Mature: 6.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MESTASTASSTVSAATQTDTQAHVIAEVHGGIGWLTLNRPQALNALSLEMIRALSHALMA CCCCHHHHHHHHHHHHCCCCHHEEEEEECCCEEEEEECCCCHHHHHHHHHHHHHHHHHHH WQHDPAVRAVILRGEGGKALCAGGDIRFFHRAATARDPQLITFFAEEYRLNHLIFRYAKP HCCCCCEEEEEEECCCCCEEEECCCCHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHCH YIALMDGVVMGGGMGISQGASLRVVTGRTRMAMPETNIGLFPDVGGGWFLARLPGHVGEY HHHHHHHHHCCCCCCCCCCCEEEEEECCCEEECCCCCCCCCCCCCCCEEEECCCHHHHHH LGVTGQVIDAADALSVGLADCHVPADTLAAVVRRLRDGTWQRAEQIAACFAEAATDPDAT HCCCCHHHHHHHHHHHCHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCC RAVIAPHRAAIDACFSQATVPAILADLAGSPDAGWAAQTGQQMARRSPLMMAVTLEQIRR EEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCEEEEEEHHHHHC GRHTTLADELRRELDMMARVFDAGDGIEGIRALAVDKDHAPRWQHASVDAVREDEVAAFF CCCCHHHHHHHHHHHHHHHHHHCCCCCCHHEEEEECCCCCCCCCCCCCCHHHHHHHHHHH ASPWRREQHPLLGLSD HCCCCCCCCCCCCCCC >Mature Secondary Structure MESTASTASSTVSAATQTDTQAHVIAEVHGGIGWLTLNRPQALNALSLEMIRALSHALMA CCCCHHHHHHHHHHHHCCCCHHEEEEEECCCEEEEEECCCCHHHHHHHHHHHHHHHHHHH WQHDPAVRAVILRGEGGKALCAGGDIRFFHRAATARDPQLITFFAEEYRLNHLIFRYAKP HCCCCCEEEEEEECCCCCEEEECCCCHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHCH YIALMDGVVMGGGMGISQGASLRVVTGRTRMAMPETNIGLFPDVGGGWFLARLPGHVGEY HHHHHHHHHCCCCCCCCCCCEEEEEECCCEEECCCCCCCCCCCCCCCEEEECCCHHHHHH LGVTGQVIDAADALSVGLADCHVPADTLAAVVRRLRDGTWQRAEQIAACFAEAATDPDAT HCCCCHHHHHHHHHHHCHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCC RAVIAPHRAAIDACFSQATVPAILADLAGSPDAGWAAQTGQQMARRSPLMMAVTLEQIRR EEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCEEEEEEHHHHHC GRHTTLADELRRELDMMARVFDAGDGIEGIRALAVDKDHAPRWQHASVDAVREDEVAAFF CCCCHHHHHHHHHHHHHHHHHHCCCCCCHHEEEEECCCCCCCCCCCCCCHHHHHHHHHHH ASPWRREQHPLLGLSD HCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA