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The map label for this gene is ugpA [H]

Identifier: 17545984

GI number: 17545984

Start: 1344710

End: 1345591

Strand: Direct

Name: ugpA [H]

Synonym: RSc1265

Alternate gene names: 17545984

Gene position: 1344710-1345591 (Clockwise)

Preceding gene: 17545983

Following gene: 17545985

Centisome position: 36.18

GC content: 64.63

Gene sequence:

>882_bases
ATGGAAAAACGGGTCGTATTCCGGTCGCGCTGGCTGCCCTATGTGCTGGTGGCCCCGCAGATCGCCGTCACCCTGGTGTT
CTTCTTCTGGCCGGCGGGGCAGGCGCTGTACCAGTCGCTGCTGCGGCAGGATGCCTTCGGCATGAATCTCGACTTCGTCG
GGCTGGAGAACTTCGCCGACCTGTTCGCCGATCCGACCTACCTCGGGTCGTTCCGGACCACGGCGGTGTTCGCCATCGGC
GTGGCCGTCGTGGGGCTGTCCACGTCACTGGCGCTGGCCTACTTCGCCGACCGCGCACTGCGCGGCGCCGCCTTCTACAA
GATGCTGCTGATCTGGCCCTACGCGGTCGCGCCGGCCGTGGCGGGCGTGCTGTGGAGCTTCCTGTTCAACCCGTCGCTGG
GCATCGTCTCGTTCGTGATCCGCAGGATGGGCGTGGACTGGAACTTCGTGCTCAACGGCGGGCAGGCACTGTTGCTGGTC
GTCGTCATCGCGGCGTGGAAGCAGATCAGCTACAACTTCCTGTTTTTCCTGGCCGGGCTGCAGAGCATCCCGAAATCGCT
GATCGAGGCGGCGGCCATCGACGGCGCGGGCCCGTGGAAGCGGTTCTGGTCGATCGTCTTTCCGCTGCTGTCGCCCACGA
CCTTTTTCCTGATGGTGGTGAACGTGGTGTATGCCTTCTTCGACACCTTCGCCATCATCGATTCGGTCACGCAGGGCGGG
CCGTTCAAGGCGACCGAGACGCTGGTGTTCAAGGTGTACCAGGACGGTGTGCGCGGGCTCGACATCGGCGGCTCGGCCGC
GCAGTCGGTGATCCTCATGGCGGTGGTGATCGTGCTGACCATCGTGCAGTTCCGCTACGTCGAGCGCAAGGTCCAGTACT
GA

Upstream 100 bases:

>100_bases
CCGCTTCGAGAAGACCGTCAAGGAGTAAGCGCGCGGTTGCGCGTGCCGTCAGCCGCCGGTCCCGCATGCGCGGGGGCGGC
GGCGCGTTTTGGGAATCCCC

Downstream 100 bases:

>100_bases
GGAGCGCGACCATGATCGAACGCCGCCCGTTCCTGGATGTCCTGACCCACCTCGTGCTGATCCTGGGCGTGGTGGTGGTC
GCCTTTCCGGTCTACGTGGT

Product: SN-glycerol-3-phosphate transmembrane ABC transporter protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 293; Mature: 293

Protein sequence:

>293_residues
MEKRVVFRSRWLPYVLVAPQIAVTLVFFFWPAGQALYQSLLRQDAFGMNLDFVGLENFADLFADPTYLGSFRTTAVFAIG
VAVVGLSTSLALAYFADRALRGAAFYKMLLIWPYAVAPAVAGVLWSFLFNPSLGIVSFVIRRMGVDWNFVLNGGQALLLV
VVIAAWKQISYNFLFFLAGLQSIPKSLIEAAAIDGAGPWKRFWSIVFPLLSPTTFFLMVVNVVYAFFDTFAIIDSVTQGG
PFKATETLVFKVYQDGVRGLDIGGSAAQSVILMAVVIVLTIVQFRYVERKVQY

Sequences:

>Translated_293_residues
MEKRVVFRSRWLPYVLVAPQIAVTLVFFFWPAGQALYQSLLRQDAFGMNLDFVGLENFADLFADPTYLGSFRTTAVFAIG
VAVVGLSTSLALAYFADRALRGAAFYKMLLIWPYAVAPAVAGVLWSFLFNPSLGIVSFVIRRMGVDWNFVLNGGQALLLV
VVIAAWKQISYNFLFFLAGLQSIPKSLIEAAAIDGAGPWKRFWSIVFPLLSPTTFFLMVVNVVYAFFDTFAIIDSVTQGG
PFKATETLVFKVYQDGVRGLDIGGSAAQSVILMAVVIVLTIVQFRYVERKVQY
>Mature_293_residues
MEKRVVFRSRWLPYVLVAPQIAVTLVFFFWPAGQALYQSLLRQDAFGMNLDFVGLENFADLFADPTYLGSFRTTAVFAIG
VAVVGLSTSLALAYFADRALRGAAFYKMLLIWPYAVAPAVAGVLWSFLFNPSLGIVSFVIRRMGVDWNFVLNGGQALLLV
VVIAAWKQISYNFLFFLAGLQSIPKSLIEAAAIDGAGPWKRFWSIVFPLLSPTTFFLMVVNVVYAFFDTFAIIDSVTQGG
PFKATETLVFKVYQDGVRGLDIGGSAAQSVILMAVVIVLTIVQFRYVERKVQY

Specific function: Part of the ABC transporter complex ugpABCE involved in sn-glycerol-3-phosphate import. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1175

COG function: function code G; ABC-type sugar transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789861, Length=292, Percent_Identity=59.9315068493151, Blast_Score=337, Evalue=7e-94,
Organism=Escherichia coli, GI1790465, Length=255, Percent_Identity=29.8039215686275, Blast_Score=97, Evalue=2e-21,
Organism=Escherichia coli, GI1787570, Length=273, Percent_Identity=29.6703296703297, Blast_Score=94, Evalue=1e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 32488; Mature: 32488

Theoretical pI: Translated: 9.75; Mature: 9.75

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKRVVFRSRWLPYVLVAPQIAVTLVFFFWPAGQALYQSLLRQDAFGMNLDFVGLENFAD
CCCCHHHHHCCCCCEEEHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEECHHHHHH
LFADPTYLGSFRTTAVFAIGVAVVGLSTSLALAYFADRALRGAAFYKMLLIWPYAVAPAV
HHCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGVLWSFLFNPSLGIVSFVIRRMGVDWNFVLNGGQALLLVVVIAAWKQISYNFLFFLAGL
HHHHHHHHHCCCHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH
QSIPKSLIEAAAIDGAGPWKRFWSIVFPLLSPTTFFLMVVNVVYAFFDTFAIIDSVTQGG
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PFKATETLVFKVYQDGVRGLDIGGSAAQSVILMAVVIVLTIVQFRYVERKVQY
CCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MEKRVVFRSRWLPYVLVAPQIAVTLVFFFWPAGQALYQSLLRQDAFGMNLDFVGLENFAD
CCCCHHHHHCCCCCEEEHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEECHHHHHH
LFADPTYLGSFRTTAVFAIGVAVVGLSTSLALAYFADRALRGAAFYKMLLIWPYAVAPAV
HHCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGVLWSFLFNPSLGIVSFVIRRMGVDWNFVLNGGQALLLVVVIAAWKQISYNFLFFLAGL
HHHHHHHHHCCCHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH
QSIPKSLIEAAAIDGAGPWKRFWSIVFPLLSPTTFFLMVVNVVYAFFDTFAIIDSVTQGG
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PFKATETLVFKVYQDGVRGLDIGGSAAQSVILMAVVIVLTIVQFRYVERKVQY
CCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11481431 [H]