| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is cinA [H]
Identifier: 17545975
GI number: 17545975
Start: 1334901
End: 1335719
Strand: Direct
Name: cinA [H]
Synonym: RSc1256
Alternate gene names: 17545975
Gene position: 1334901-1335719 (Clockwise)
Preceding gene: 17545974
Following gene: 17545977
Centisome position: 35.92
GC content: 69.47
Gene sequence:
>819_bases ATGGCTTTCGGCATGATCATCATCGGCGACGAGATCCTTTCCGGCCGCCGCGAAGACCAGCATCTGCGCAAGCTGATCGA GGTGCTGCGCGCGCGTGGCCTGTCGCTCGAATGGGCCGAGTACGTCGGCGACCAGCCCGCGCGCATCACCGATGTGCTCA AGCGCACCTTCGCCACCGGCGACGTGGTGTTCTGCACCGGCGGCATCGGCGCCACGCCCGATGACCACACGCGCCAATGC GCCGCCGCCGCGCTGGGCGTGCCGCTGGCGCTGCATCCCGATGCGCGCGAGCAGATCACGCTGCGCATCGCCGAGACCGC CGCCGGCGACCCGCTCAAGGCGGACCTGTCGACGCCCGAGAACCAGCACCGCTTCAAGATGGGCGAGTTTCCGCAAGGCG CGCGCATCATCCCCAACGCCTACAACCGCATCCCCGGCTTCTCCGTGGGCGACCATCACTTCATGCCGGGCTTTCCGGTG ATGGCATGGCCGATGATGGAGTGGGTGCTCGATACCTACTACGCCCACCTGTTCCACAGCGCTCCGCGCGAAGAGCGCTC CTTCCTGGTGTTCGGCTTGCCGGAGTCGCGGCTGACGCCGCTGATGGAGCGCATCGAAGCCGAGTTCGGCGGGGTCAAGG TGTTCAGCCTGCCCAGCGTGGGCGATGCGGCGCGCGGCGAGCGCTACGCGCGCAGCCACATCGACCTCGGCGTGAAGGGG CCGCCCGACGCGGTGGCGCGCGCCTATGCGGTGCTGCGTGAAGGCGCTGCGGCGCTCGGCGGCGAGATTCTGGAAGCGGA CGCCGCCGCCGCGTCCTGA
Upstream 100 bases:
>100_bases CGGCTGCGCGGCGAGGCGCCGCCGCCGACCCGCGTGATCGAGTCGACCGTGATCGACGTCACCCCCGGCCTCCCGCGCGA ATAAGACAGGAAACGATCCC
Downstream 100 bases:
>100_bases GCGGCGGGGCCTCGGGCGCGCCGGCGCCCGGAGCGTGCCCGCACGGCGCCGCCGCCGACGCGCGTGGCGAATCTCGCGGG CCGGGAGCGCGCCGCGCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 272; Mature: 271
Protein sequence:
>272_residues MAFGMIIIGDEILSGRREDQHLRKLIEVLRARGLSLEWAEYVGDQPARITDVLKRTFATGDVVFCTGGIGATPDDHTRQC AAAALGVPLALHPDAREQITLRIAETAAGDPLKADLSTPENQHRFKMGEFPQGARIIPNAYNRIPGFSVGDHHFMPGFPV MAWPMMEWVLDTYYAHLFHSAPREERSFLVFGLPESRLTPLMERIEAEFGGVKVFSLPSVGDAARGERYARSHIDLGVKG PPDAVARAYAVLREGAAALGGEILEADAAAAS
Sequences:
>Translated_272_residues MAFGMIIIGDEILSGRREDQHLRKLIEVLRARGLSLEWAEYVGDQPARITDVLKRTFATGDVVFCTGGIGATPDDHTRQC AAAALGVPLALHPDAREQITLRIAETAAGDPLKADLSTPENQHRFKMGEFPQGARIIPNAYNRIPGFSVGDHHFMPGFPV MAWPMMEWVLDTYYAHLFHSAPREERSFLVFGLPESRLTPLMERIEAEFGGVKVFSLPSVGDAARGERYARSHIDLGVKG PPDAVARAYAVLREGAAALGGEILEADAAAAS >Mature_271_residues AFGMIIIGDEILSGRREDQHLRKLIEVLRARGLSLEWAEYVGDQPARITDVLKRTFATGDVVFCTGGIGATPDDHTRQCA AAALGVPLALHPDAREQITLRIAETAAGDPLKADLSTPENQHRFKMGEFPQGARIIPNAYNRIPGFSVGDHHFMPGFPVM AWPMMEWVLDTYYAHLFHSAPREERSFLVFGLPESRLTPLMERIEAEFGGVKVFSLPSVGDAARGERYARSHIDLGVKGP PDAVARAYAVLREGAAALGGEILEADAAAAS
Specific function: Unknown
COG id: COG1058
COG function: function code R; Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CinA family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6323832, Length=227, Percent_Identity=27.3127753303965, Blast_Score=76, Evalue=7e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008136 - InterPro: IPR008135 - InterPro: IPR001453 [H]
Pfam domain/function: PF02464 CinA; PF00994 MoCF_biosynth [H]
EC number: NA
Molecular weight: Translated: 29630; Mature: 29499
Theoretical pI: Translated: 5.82; Mature: 5.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFGMIIIGDEILSGRREDQHLRKLIEVLRARGLSLEWAEYVGDQPARITDVLKRTFATG CCEEEEEECHHHHCCCCHHHHHHHHHHHHHHCCCCEEHHHHCCCCCHHHHHHHHHHHCCC DVVFCTGGIGATPDDHTRQCAAAALGVPLALHPDAREQITLRIAETAAGDPLKADLSTPE CEEEEECCCCCCCCHHHHHHHHHHHCCCEEECCCCCCEEEEEEECCCCCCCCCCCCCCCC NQHRFKMGEFPQGARIIPNAYNRIPGFSVGDHHFMPGFPVMAWPMMEWVLDTYYAHLFHS CCCCCCCCCCCCCCEECCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC APREERSFLVFGLPESRLTPLMERIEAEFGGVKVFSLPSVGDAARGERYARSHIDLGVKG CCCCCCCEEEEECCHHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHCCCCCCC PPDAVARAYAVLREGAAALGGEILEADAAAAS CHHHHHHHHHHHHHHHHHHCCHHHHCCHHCCC >Mature Secondary Structure AFGMIIIGDEILSGRREDQHLRKLIEVLRARGLSLEWAEYVGDQPARITDVLKRTFATG CEEEEEECHHHHCCCCHHHHHHHHHHHHHHCCCCEEHHHHCCCCCHHHHHHHHHHHCCC DVVFCTGGIGATPDDHTRQCAAAALGVPLALHPDAREQITLRIAETAAGDPLKADLSTPE CEEEEECCCCCCCCHHHHHHHHHHHCCCEEECCCCCCEEEEEEECCCCCCCCCCCCCCCC NQHRFKMGEFPQGARIIPNAYNRIPGFSVGDHHFMPGFPVMAWPMMEWVLDTYYAHLFHS CCCCCCCCCCCCCCEECCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC APREERSFLVFGLPESRLTPLMERIEAEFGGVKVFSLPSVGDAARGERYARSHIDLGVKG CCCCCCCEEEEECCHHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHCCCCCCC PPDAVARAYAVLREGAAALGGEILEADAAAAS CHHHHHHHHHHHHHHHHHHCCHHHHCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA