| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is iolG
Identifier: 17545965
GI number: 17545965
Start: 1321305
End: 1322318
Strand: Direct
Name: iolG
Synonym: RSc1246
Alternate gene names: 17545965
Gene position: 1321305-1322318 (Clockwise)
Preceding gene: 17545964
Following gene: 17545966
Centisome position: 35.55
GC content: 66.77
Gene sequence:
>1014_bases ATGACTCTGCAAATTGGGGTGATCGGCTGCGGCGCGATCGGCCAGGACCACATCCGGCGGCTGACGCGCACGTTGTCGGG CGCGCGCGTGGTGGCCGTGACCGACATCGATCCGACGCAGGCACACGCCGCCGTGGCGAATCACGGCCTGAATGCCGAGG TGTACGCGAACGGCGGCGATCTGATCGAGGCGCCGGACGTGCAGGCGGTGCTGGTCACGTCGTGGGGGCCGACGCACGAG GAATTTGTCCTGAAGGCGATCGCGCAAGGCAAGCCGGTGTTCTGCGAGAAGCCGCTGGCGGTGACCGCCGACGGTTGCAT GCGGATCGTCGCGGCCGAGCAGGCGCACGGCAGCAGGCTGGTGCAGGTGGGCTTCATGCGCCCATACGACGCCGGCTATC GTGCGCTCAAGCAGGTGATCGACAGCGGCACGATCGGCGCACCGCTGATGCTGCATTGCGCGCACCGCAACCCGTCGGTC GGCGACCGCTACATGACCGACATGGCGATCACCGACACGCTGATCCACGAACTCGACGTGCTGCGCTGGCTGACCGGCGA CGACTATGTCAGCGCGCAGGTCGTCTATCCGAGGAAGACGCGCCACGCGTCTTCGCATCTCGCCGATCCGCAGATCGTGC TGCTGGAGACGGCGCAGGGCGTGCGCATCGACGTGGAGATTTTCGTCAACTGCCAGTATGGCTACGACATCCAGTGCGAG GTGGTTGGCGAGAACGGGATTGCCACGCTGCCGGACCCGCAGGCGGTGTCGCTCAAACATGCGGCCAGGCATGCGATCGC GATCCTGACCGATTGGAAGGACCGCTTCATCGCCGCGTACGACATCGAGCTGCAGGCCTTCATCGATGGCGTGCAAGGGG GCGCATTGACCGGCCCATCGGCGTGGGATGGCTATGCCGCGGCGGTTGCCGCCGACGCCTGCGTGCGGGCACAGAAGAGC GGCGCGATCGAGCGCATCGAGATGGCGGCGAGGCCGGCGTTCTATCGTGGCTGA
Upstream 100 bases:
>100_bases GAAGTGATGGAGGCGGAGAACAGCGAGGCGTTGCTTGCCGAGAGCATGCACTACATCCACCACGCATTGTCTTGACACGC TGGACGACAGGGAAAACGGT
Downstream 100 bases:
>100_bases GTCCGGCCGCGGCCACAACGAATGGAATCCACCGATATGACGATGAAAATCGGCTGTGCGCCCTGCTGCTGGGGCGTGGA CGACGTGAGGAATCCGCACC
Product: oxidoreductase myo-inositol 2-dehydrogenase signal peptide protein
Products: NA
Alternate protein names: Myo-inositol 2-dehydrogenase; MI 2-dehydrogenase
Number of amino acids: Translated: 337; Mature: 336
Protein sequence:
>337_residues MTLQIGVIGCGAIGQDHIRRLTRTLSGARVVAVTDIDPTQAHAAVANHGLNAEVYANGGDLIEAPDVQAVLVTSWGPTHE EFVLKAIAQGKPVFCEKPLAVTADGCMRIVAAEQAHGSRLVQVGFMRPYDAGYRALKQVIDSGTIGAPLMLHCAHRNPSV GDRYMTDMAITDTLIHELDVLRWLTGDDYVSAQVVYPRKTRHASSHLADPQIVLLETAQGVRIDVEIFVNCQYGYDIQCE VVGENGIATLPDPQAVSLKHAARHAIAILTDWKDRFIAAYDIELQAFIDGVQGGALTGPSAWDGYAAAVAADACVRAQKS GAIERIEMAARPAFYRG
Sequences:
>Translated_337_residues MTLQIGVIGCGAIGQDHIRRLTRTLSGARVVAVTDIDPTQAHAAVANHGLNAEVYANGGDLIEAPDVQAVLVTSWGPTHE EFVLKAIAQGKPVFCEKPLAVTADGCMRIVAAEQAHGSRLVQVGFMRPYDAGYRALKQVIDSGTIGAPLMLHCAHRNPSV GDRYMTDMAITDTLIHELDVLRWLTGDDYVSAQVVYPRKTRHASSHLADPQIVLLETAQGVRIDVEIFVNCQYGYDIQCE VVGENGIATLPDPQAVSLKHAARHAIAILTDWKDRFIAAYDIELQAFIDGVQGGALTGPSAWDGYAAAVAADACVRAQKS GAIERIEMAARPAFYRG >Mature_336_residues TLQIGVIGCGAIGQDHIRRLTRTLSGARVVAVTDIDPTQAHAAVANHGLNAEVYANGGDLIEAPDVQAVLVTSWGPTHEE FVLKAIAQGKPVFCEKPLAVTADGCMRIVAAEQAHGSRLVQVGFMRPYDAGYRALKQVIDSGTIGAPLMLHCAHRNPSVG DRYMTDMAITDTLIHELDVLRWLTGDDYVSAQVVYPRKTRHASSHLADPQIVLLETAQGVRIDVEIFVNCQYGYDIQCEV VGENGIATLPDPQAVSLKHAARHAIAILTDWKDRFIAAYDIELQAFIDGVQGGALTGPSAWDGYAAAVAADACVRAQKSG AIERIEMAARPAFYRG
Specific function: Involved in the oxidation of myo-inositol (MI) to 2- keto-myo-inositol (2KMI or 2-inosose)
COG id: COG0673
COG function: function code R; Predicted dehydrogenases and related proteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gfo/idh/mocA family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): IOLG_RALSO (Q8XZZ9)
Other databases:
- EMBL: AL646052 - RefSeq: NP_519367.1 - ProteinModelPortal: Q8XZZ9 - SMR: Q8XZZ9 - GeneID: 1220069 - GenomeReviews: AL646052_GR - KEGG: rso:RSc1246 - NMPDR: fig|267608.1.peg.1246 - HOGENOM: HBG612336 - OMA: DWKDRFI - ProtClustDB: CLSK896889 - BioCyc: RSOL267608:RSC1246-MONOMER - GO: GO:0005488 - HAMAP: MF_01671 - InterPro: IPR016040 - InterPro: IPR000683 - InterPro: IPR004104 - Gene3D: G3DSA:3.40.50.720
Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C
EC number: =1.1.1.18
Molecular weight: Translated: 36236; Mature: 36104
Theoretical pI: Translated: 5.91; Mature: 5.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLQIGVIGCGAIGQDHIRRLTRTLSGARVVAVTDIDPTQAHAAVANHGLNAEVYANGGD CEEEEEEEEECCCCHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHCCCCEEEEECCCC LIEAPDVQAVLVTSWGPTHEEFVLKAIAQGKPVFCEKPLAVTADGCMRIVAAEQAHGSRL EEECCCCCEEEEECCCCCHHHHHHHHHHCCCCCEECCCCEEECCHHEEEEEECCCCCCEE VQVGFMRPYDAGYRALKQVIDSGTIGAPLMLHCAHRNPSVGDRYMTDMAITDTLIHELDV EEEECCCCCHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHH LRWLTGDDYVSAQVVYPRKTRHASSHLADPQIVLLETAQGVRIDVEIFVNCQYGYDIQCE HHHCCCCCEEEEEEECCCCCCCCHHHCCCCEEEEEECCCCCEEEEEEEEEEECCCEEEEE VVGENGIATLPDPQAVSLKHAARHAIAILTDWKDRFIAAYDIELQAFIDGVQGGALTGPS EECCCCEEECCCCCCCHHHHHHCEEEEEEEECCCCEEEEEEEEEEEECCCCCCCCCCCCC AWDGYAAAVAADACVRAQKSGAIERIEMAARPAFYRG CCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCC >Mature Secondary Structure TLQIGVIGCGAIGQDHIRRLTRTLSGARVVAVTDIDPTQAHAAVANHGLNAEVYANGGD EEEEEEEEECCCCHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHCCCCEEEEECCCC LIEAPDVQAVLVTSWGPTHEEFVLKAIAQGKPVFCEKPLAVTADGCMRIVAAEQAHGSRL EEECCCCCEEEEECCCCCHHHHHHHHHHCCCCCEECCCCEEECCHHEEEEEECCCCCCEE VQVGFMRPYDAGYRALKQVIDSGTIGAPLMLHCAHRNPSVGDRYMTDMAITDTLIHELDV EEEECCCCCHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHH LRWLTGDDYVSAQVVYPRKTRHASSHLADPQIVLLETAQGVRIDVEIFVNCQYGYDIQCE HHHCCCCCEEEEEEECCCCCCCCHHHCCCCEEEEEECCCCCEEEEEEEEEEECCCEEEEE VVGENGIATLPDPQAVSLKHAARHAIAILTDWKDRFIAAYDIELQAFIDGVQGGALTGPS EECCCCEEECCCCCCCHHHHHHCEEEEEEEECCCCEEEEEEEEEEEECCCCCCCCCCCCC AWDGYAAAVAADACVRAQKSGAIERIEMAARPAFYRG CCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11823852