| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is iolI [H]
Identifier: 17545964
GI number: 17545964
Start: 1320458
End: 1321279
Strand: Direct
Name: iolI [H]
Synonym: RSc1245
Alternate gene names: 17545964
Gene position: 1320458-1321279 (Clockwise)
Preceding gene: 17545963
Following gene: 17545965
Centisome position: 35.53
GC content: 66.67
Gene sequence:
>822_bases ATGAACCACCGCATCCAATTTGGCATCAACCGGATCAGCGCACCGCGCCAGACGTTTGCCGACTATCTGGCCATGTGCAA GCGCATCGGCGTTTCGGCCATCGAGATCCGCAACGACCTGAAAGGCGTGGAGATCAGCGACGGCACGCCGGCCGCCGAAC TGAAGGCGCAGGCCGAGCAGGCCGGTATTGTCATCCGCTCGATCAACGCGCTGTATCCGTTCGACGTGTTCGACGCCGGG CTCGAGGCCCGGGCGCGCTCGATGGCCGCCTACGCGCGCGCCTGCGGCGCCCAGGCGCTGGTGATGTGCCCGCTCAACAG CCGGGATGACCAGCGGACCGAGGCCGAGCGCCGCCGGGATCTGGTGCACGCGCTGCGCAGGCTGCGCCCGATTCTGGACG AGTACGGTATCGAAGGGCTGGTCGAGCCGCTCGGCTTCGAGGAATGCGTCCTGCGCCGCAAGTCCGATGCCGTCGAAGCC ATCTATGCCGCCGCCGGCGAGCGGCATTTCAAGCTGGTGCACGACACGTTCCACCACCACCTGGCCGGCGAGGACATCTT CTTTCCCGACCTGACGGGGCTCGTGCATGTGTCGGGCGTCGAATCGGCGGAGCTCGACGCGCGCGACATGCGCGATGGCC ACCGCGTCCTGGTCGGGCAGGGTGACCGGCTCGGCAATATCGCGCAACTGCGTACGCTGCTCGATCGCGGCTACCGGGGC CTGGTGTCGTTCGAGCCGTTCGCGGCCGAAGTGATGGAGGCGGAGAACAGCGAGGCGTTGCTTGCCGAGAGCATGCACTA CATCCACCACGCATTGTCTTGA
Upstream 100 bases:
>100_bases CGCGGAGGCATCGTCCCGCTTCATGCGCGGTGAACTGCAACGTTACATCGACCGATATTTCCGCGGCGCCGTGCGCTGAA TCCACCAATCGACCCCAACC
Downstream 100 bases:
>100_bases CACGCTGGACGACAGGGAAAACGGTATGACTCTGCAAATTGGGGTGATCGGCTGCGGCGCGATCGGCCAGGACCACATCC GGCGGCTGACGCGCACGTTG
Product: protein implicated IN myo-inositol catabolique pathway
Products: NA
Alternate protein names: 2-keto-myo-inositol isomerase; 2KMI isomerase [H]
Number of amino acids: Translated: 273; Mature: 273
Protein sequence:
>273_residues MNHRIQFGINRISAPRQTFADYLAMCKRIGVSAIEIRNDLKGVEISDGTPAAELKAQAEQAGIVIRSINALYPFDVFDAG LEARARSMAAYARACGAQALVMCPLNSRDDQRTEAERRRDLVHALRRLRPILDEYGIEGLVEPLGFEECVLRRKSDAVEA IYAAAGERHFKLVHDTFHHHLAGEDIFFPDLTGLVHVSGVESAELDARDMRDGHRVLVGQGDRLGNIAQLRTLLDRGYRG LVSFEPFAAEVMEAENSEALLAESMHYIHHALS
Sequences:
>Translated_273_residues MNHRIQFGINRISAPRQTFADYLAMCKRIGVSAIEIRNDLKGVEISDGTPAAELKAQAEQAGIVIRSINALYPFDVFDAG LEARARSMAAYARACGAQALVMCPLNSRDDQRTEAERRRDLVHALRRLRPILDEYGIEGLVEPLGFEECVLRRKSDAVEA IYAAAGERHFKLVHDTFHHHLAGEDIFFPDLTGLVHVSGVESAELDARDMRDGHRVLVGQGDRLGNIAQLRTLLDRGYRG LVSFEPFAAEVMEAENSEALLAESMHYIHHALS >Mature_273_residues MNHRIQFGINRISAPRQTFADYLAMCKRIGVSAIEIRNDLKGVEISDGTPAAELKAQAEQAGIVIRSINALYPFDVFDAG LEARARSMAAYARACGAQALVMCPLNSRDDQRTEAERRRDLVHALRRLRPILDEYGIEGLVEPLGFEECVLRRKSDAVEA IYAAAGERHFKLVHDTFHHHLAGEDIFFPDLTGLVHVSGVESAELDARDMRDGHRVLVGQGDRLGNIAQLRTLLDRGYRG LVSFEPFAAEVMEAENSEALLAESMHYIHHALS
Specific function: Involved in the reversible interconverion of 2-keto-myo- inositol (2KMI, inosose or 2,4,6/3,5-pentahydroxycyclohexanone) to 1-keto-D-chiro-inositol (1KDCI or 2,3,5/4,6- pentahydroxycyclohexanone) [H]
COG id: COG4130
COG function: function code G; Predicted sugar epimerase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the iolI family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013022 - InterPro: IPR012307 [H]
Pfam domain/function: PF01261 AP_endonuc_2 [H]
EC number: NA
Molecular weight: Translated: 30359; Mature: 30359
Theoretical pI: Translated: 6.08; Mature: 6.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNHRIQFGINRISAPRQTFADYLAMCKRIGVSAIEIRNDLKGVEISDGTPAAELKAQAEQ CCCEEEECHHHHCCCHHHHHHHHHHHHHHCCHHEEHHHCCCCCEECCCCCHHHHHHHHHH AGIVIRSINALYPFDVFDAGLEARARSMAAYARACGAQALVMCPLNSRDDQRTEAERRRD HCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHH LVHALRRLRPILDEYGIEGLVEPLGFEECVLRRKSDAVEAIYAAAGERHFKLVHDTFHHH HHHHHHHHHHHHHHHCHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH LAGEDIFFPDLTGLVHVSGVESAELDARDMRDGHRVLVGQGDRLGNIAQLRTLLDRGYRG HCCCCCCCCCCCCEEEECCCCCHHCCHHHCCCCCEEEEECCCCCCHHHHHHHHHHHCCCC LVSFEPFAAEVMEAENSEALLAESMHYIHHALS CCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure MNHRIQFGINRISAPRQTFADYLAMCKRIGVSAIEIRNDLKGVEISDGTPAAELKAQAEQ CCCEEEECHHHHCCCHHHHHHHHHHHHHHCCHHEEHHHCCCCCEECCCCCHHHHHHHHHH AGIVIRSINALYPFDVFDAGLEARARSMAAYARACGAQALVMCPLNSRDDQRTEAERRRD HCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHH LVHALRRLRPILDEYGIEGLVEPLGFEECVLRRKSDAVEAIYAAAGERHFKLVHDTFHHH HHHHHHHHHHHHHHHCHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH LAGEDIFFPDLTGLVHVSGVESAELDARDMRDGHRVLVGQGDRLGNIAQLRTLLDRGYRG HCCCCCCCCCCCCEEEECCCCCHHCCHHHCCCCCEEEEECCCCCCHHHHHHHHHHHCCCC LVSFEPFAAEVMEAENSEALLAESMHYIHHALS CCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11058132 [H]