| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is mtfA [H]
Identifier: 17545903
GI number: 17545903
Start: 1246856
End: 1247722
Strand: Reverse
Name: mtfA [H]
Synonym: RSc1184
Alternate gene names: 17545903
Gene position: 1247722-1246856 (Counterclockwise)
Preceding gene: 17545904
Following gene: 17545902
Centisome position: 33.57
GC content: 68.17
Gene sequence:
>867_bases ATGCTTTCAAGACTCTCCCAATGGCTGTCGCGACGCGCACGCTCGCGCCAGCTCGCCCGCTATGCCATCTCCGACGCGCT GTGGACACGCACGCTCTCCGGCCTGCCCTTCCTGCTCGACTGGCCGCAGGCGGCGCTCGCGCGCCTGCGTGAAACCGCCA CGCTGTTCATCGCCGAGAAAGAGTTCACCACGGCCCACGGCCTGGCGCTCACCGACGAGATGGTGGTCAGCATCGCCGCG CAGGCGAGCGTGCCCATCCTCGAACTGGGGATTGCGTGGTACCGGGGCTGGCGTGGCGTGGTTCTCTACCCCGGCGAGTT CCTGATCCGCGGCGAGGCGATGGACGAAGACGGCGTCGTGCACGACGTGCGCCAGGAAGCCAGCGGCGAGGCGGCGGCCA ACGGCCTGGTCCTGCTGTCGTGGCAGGACATCGAACTGGGCAGCGTGCTGGCCGGACCCGACATGCAGCCGTACAACGTC GTCATGCACGAGTTCACCCACAAGCTCGACATGCTCAACGGCGAAGCGGACGGCATCCCGGCGTTCTCGTCGCGGCTGCA TGCCGGGCTCGACCGCGAGCAATGGGCCGACGACCTCTACGCCGAATACGACGCCTTCGCCGAGCGCTGCGATCGCATTC CCGAACGGCGCTGGGATGCCGATCCGATCCTGTCGCTGCTCGATCCGTACGGCGCCCAGCATCCGGCGGAGTTCTTCGCG GTCGCCTCGGAAGTGTTTTTCGTCGAGCCCGCCGCGCTGCAGGACACGCTGCCGGCGCTCTACGCGCTCCTGCAAGCGTT CTATCTGCAAGACCCGGCACGGCGCATGCTGGACGCCGGGCGACACGCCGAGCCAGCCACGCCATGA
Upstream 100 bases:
>100_bases ACGTCGCCAACCAGCGCGGCGCGCGGCTGCTATCGGTGGCCTGACGCCGGCCGCCTGAACACCGAGGTGAAGGCTGGGAC GCGCACCCTATACTGGGCGC
Downstream 100 bases:
>100_bases CGATGCGCCCCACCTGTTCCTGTCGCCTTGCCGCACTGGCGCTGTCCGCGGCCGCGGCGGCCGCGCATGCGCAGTTGCCC GCCCCGCTGGTCCTGAGCCT
Product: hypothetical protein
Products: NA
Alternate protein names: Mlc titration factor A [H]
Number of amino acids: Translated: 288; Mature: 288
Protein sequence:
>288_residues MLSRLSQWLSRRARSRQLARYAISDALWTRTLSGLPFLLDWPQAALARLRETATLFIAEKEFTTAHGLALTDEMVVSIAA QASVPILELGIAWYRGWRGVVLYPGEFLIRGEAMDEDGVVHDVRQEASGEAAANGLVLLSWQDIELGSVLAGPDMQPYNV VMHEFTHKLDMLNGEADGIPAFSSRLHAGLDREQWADDLYAEYDAFAERCDRIPERRWDADPILSLLDPYGAQHPAEFFA VASEVFFVEPAALQDTLPALYALLQAFYLQDPARRMLDAGRHAEPATP
Sequences:
>Translated_288_residues MLSRLSQWLSRRARSRQLARYAISDALWTRTLSGLPFLLDWPQAALARLRETATLFIAEKEFTTAHGLALTDEMVVSIAA QASVPILELGIAWYRGWRGVVLYPGEFLIRGEAMDEDGVVHDVRQEASGEAAANGLVLLSWQDIELGSVLAGPDMQPYNV VMHEFTHKLDMLNGEADGIPAFSSRLHAGLDREQWADDLYAEYDAFAERCDRIPERRWDADPILSLLDPYGAQHPAEFFA VASEVFFVEPAALQDTLPALYALLQAFYLQDPARRMLDAGRHAEPATP >Mature_288_residues MLSRLSQWLSRRARSRQLARYAISDALWTRTLSGLPFLLDWPQAALARLRETATLFIAEKEFTTAHGLALTDEMVVSIAA QASVPILELGIAWYRGWRGVVLYPGEFLIRGEAMDEDGVVHDVRQEASGEAAANGLVLLSWQDIELGSVLAGPDMQPYNV VMHEFTHKLDMLNGEADGIPAFSSRLHAGLDREQWADDLYAEYDAFAERCDRIPERRWDADPILSLLDPYGAQHPAEFFA VASEVFFVEPAALQDTLPALYALLQAFYLQDPARRMLDAGRHAEPATP
Specific function: Involved in the regulation of ptsG expression by binding and inactivating mlc [H]
COG id: COG3228
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mtfA family [H]
Homologues:
Organism=Escherichia coli, GI87082014, Length=254, Percent_Identity=32.2834645669291, Blast_Score=125, Evalue=4e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010384 [H]
Pfam domain/function: PF06167 DUF980 [H]
EC number: NA
Molecular weight: Translated: 32170; Mature: 32170
Theoretical pI: Translated: 4.46; Mature: 4.46
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSRLSQWLSRRARSRQLARYAISDALWTRTLSGLPFLLDWPQAALARLRETATLFIAEK CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECHHHHHHHHHHHHEEEEEEC EFTTAHGLALTDEMVVSIAAQASVPILELGIAWYRGWRGVVLYPGEFLIRGEAMDEDGVV CCCHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEECCCEEEECCCCCCCCHH HDVRQEASGEAAANGLVLLSWQDIELGSVLAGPDMQPYNVVMHEFTHKLDMLNGEADGIP HHHHHHHCCCHHHCCEEEEEECCCCCCCEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCC AFSSRLHAGLDREQWADDLYAEYDAFAERCDRIPERRWDADPILSLLDPYGAQHPAEFFA HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCHHHCCCHHHHHHHHCCCCCCCHHHHHH VASEVFFVEPAALQDTLPALYALLQAFYLQDPARRMLDAGRHAEPATP HHHHHHEECCHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCC >Mature Secondary Structure MLSRLSQWLSRRARSRQLARYAISDALWTRTLSGLPFLLDWPQAALARLRETATLFIAEK CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECHHHHHHHHHHHHEEEEEEC EFTTAHGLALTDEMVVSIAAQASVPILELGIAWYRGWRGVVLYPGEFLIRGEAMDEDGVV CCCHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEECCCEEEECCCCCCCCHH HDVRQEASGEAAANGLVLLSWQDIELGSVLAGPDMQPYNVVMHEFTHKLDMLNGEADGIP HHHHHHHCCCHHHCCEEEEEECCCCCCCEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCC AFSSRLHAGLDREQWADDLYAEYDAFAERCDRIPERRWDADPILSLLDPYGAQHPAEFFA HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCHHHCCCHHHHHHHHCCCCCCCHHHHHH VASEVFFVEPAALQDTLPALYALLQAFYLQDPARRMLDAGRHAEPATP HHHHHHEECCHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA