| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is pyrG
Identifier: 17545845
GI number: 17545845
Start: 1184558
End: 1186222
Strand: Direct
Name: pyrG
Synonym: RSc1126
Alternate gene names: 17545845
Gene position: 1184558-1186222 (Clockwise)
Preceding gene: 17545844
Following gene: 17545846
Centisome position: 31.87
GC content: 65.29
Gene sequence:
>1665_bases ATGACCAAGTTCGTATTCGTCACCGGTGGCGTTGTGTCCTCGCTCGGCAAGGGCATCGCCGCCGCCTCGCTCGCGGCCAT CCTTGAGTCGCGCGGCCTCAAAGTCACCCTCCTCAAACTCGATCCCTACATCAACGTCGACCCGGGCACGATGAGCCCGT TCCAGCACGGCGAGGTGTTCGTGACGGAGGACGGTGCAGAAACCGACCTCGATCTTGGCCACTACGAGCGCTTCGTCTCG GCCAAGATGCGCAAGGCCAACAACTTCACCACCGGCCAGATCTACGAATCCGTGATCCGCAAGGAGCGTCGCGGCGAGTA TCTCGGCAAGACGGTGCAGGTCATTCCGCACATCACCAACGAGATCCAGGCCTTCATCGAGCGTGGCGCCAAGGCCTCGC ACGATGGCAAGGCAGACGTGGCGATCGTCGAGATCGGCGGCACGGTGGGCGACATCGAGTCGCTGCCGTTCCTGGAAGCC GCGCGGCAGATGAGCCTGCGCCTGGGCCGCAACCAGGCGGCGTTCGTGCATCTGACGCTGGTGCCGTTCATCGCCAGCGC CGGCGAGCTCAAGACCAAGCCGACCCAGCACTCGGTGCAGAAGCTGCGCGAGATCGGCGTCCAGCCGACCGCGCTGCTGT GCCGCGCCGACCGCCCCATCCCCGATGACGAGCGCGCGAAGATCTCGCTGTTCGCCAACATGCCGCAGGACGCGGTGATC TCGGTGTGGGACGTCGACACCATCTACAAGATCCCGCAGATGCTCAACGAGCAGGGCCTCGACCGCATCATCTGCGAGGA GCTGCGCATCGATGCACCGCCGGCCGACCTGTCCATGTGGTCGCGCATGGTGCACACGCTGGAGAACCCGCAGCACGAGA TCACCATCGGCATGGTCGGCAAGTATGTCGACCTGACCGAGTCGTACAAGTCGCTGATCGAGGCGCTGCGCCATGCCGGG CTGCACACCTCGACGCGCGTCAACATCGAGTACATCGATTCCGAAGAGCTGGAGTCGGGCCATACGCAGGTGCTGGAATC GCTCGACGCGATCCTGGTGCCGGGCGGCTTCGGCAAGCGCGGCACGGAAGGCAAGATCCGCGCGATCCAGTACGCCCGCG AGAAGACTGTGCCGTACCTGGGCATCTGCCTGGGGATGCAGCTGGCCGTCATCGAGTTCGCCCGCCACGTGGCCGGCATG CAGGACGCCAACAGCACGGAATTCAACCTCGAGACCGAGCATCCGGTGGTGGCGCTGATCACCGAATGGCAGGATCGCGA CGGCCGCGTTGAAAAACGCTCGGCCGACTCCGACCTGGGCGGCACCATGCGCCTGGGCGCGCAGCGCGTGCCGGTCCAGA CCGGCACCAAGGCGTCGCAGATCTATGGTGCTGAGGTCAACGAGCGCCACCGTCATCGCTACGAAGTGAACAACCACTAC GTGCCGCAGCTGGAGAAGTCCGGGATGATCATCTCGGCGCGCACGCCGTCGGAAAACCTGCCGGAAATGATGGAGCTGCC GGGCGCGATGCACCCGTGGTTCGTCGGCGTGCAGTTCCACCCGGAATTCACCTCGACACCGCGCGACGGCCACCCGCTGT TCAAGGCCTATGTGGAAGCCGCGCTGGCGCATCGCCAGCGCCAGGCACAACGCGCGGTCGCCTGA
Upstream 100 bases:
>100_bases CCATGCGGCACGCCGCCTGAACGGGCGAATTCGGCGGCGCCGACACGGATCGGACAGGGCACCTTTGCTATAATCCGGCT TTCCCCGGCAAGCCAGGTTT
Downstream 100 bases:
>100_bases GCGGCAGCGCACGGGAAACACGATGAAACTCTGCGATTTCGAGATCGGCCTCGACCGTCCGTTCTTCCTGATTGCCGGCA CCTGCGTGATCGAGTCCGAG
Product: CTP synthetase
Products: NA
Alternate protein names: CTP synthetase; UTP--ammonia ligase
Number of amino acids: Translated: 554; Mature: 553
Protein sequence:
>554_residues MTKFVFVTGGVVSSLGKGIAAASLAAILESRGLKVTLLKLDPYINVDPGTMSPFQHGEVFVTEDGAETDLDLGHYERFVS AKMRKANNFTTGQIYESVIRKERRGEYLGKTVQVIPHITNEIQAFIERGAKASHDGKADVAIVEIGGTVGDIESLPFLEA ARQMSLRLGRNQAAFVHLTLVPFIASAGELKTKPTQHSVQKLREIGVQPTALLCRADRPIPDDERAKISLFANMPQDAVI SVWDVDTIYKIPQMLNEQGLDRIICEELRIDAPPADLSMWSRMVHTLENPQHEITIGMVGKYVDLTESYKSLIEALRHAG LHTSTRVNIEYIDSEELESGHTQVLESLDAILVPGGFGKRGTEGKIRAIQYAREKTVPYLGICLGMQLAVIEFARHVAGM QDANSTEFNLETEHPVVALITEWQDRDGRVEKRSADSDLGGTMRLGAQRVPVQTGTKASQIYGAEVNERHRHRYEVNNHY VPQLEKSGMIISARTPSENLPEMMELPGAMHPWFVGVQFHPEFTSTPRDGHPLFKAYVEAALAHRQRQAQRAVA
Sequences:
>Translated_554_residues MTKFVFVTGGVVSSLGKGIAAASLAAILESRGLKVTLLKLDPYINVDPGTMSPFQHGEVFVTEDGAETDLDLGHYERFVS AKMRKANNFTTGQIYESVIRKERRGEYLGKTVQVIPHITNEIQAFIERGAKASHDGKADVAIVEIGGTVGDIESLPFLEA ARQMSLRLGRNQAAFVHLTLVPFIASAGELKTKPTQHSVQKLREIGVQPTALLCRADRPIPDDERAKISLFANMPQDAVI SVWDVDTIYKIPQMLNEQGLDRIICEELRIDAPPADLSMWSRMVHTLENPQHEITIGMVGKYVDLTESYKSLIEALRHAG LHTSTRVNIEYIDSEELESGHTQVLESLDAILVPGGFGKRGTEGKIRAIQYAREKTVPYLGICLGMQLAVIEFARHVAGM QDANSTEFNLETEHPVVALITEWQDRDGRVEKRSADSDLGGTMRLGAQRVPVQTGTKASQIYGAEVNERHRHRYEVNNHY VPQLEKSGMIISARTPSENLPEMMELPGAMHPWFVGVQFHPEFTSTPRDGHPLFKAYVEAALAHRQRQAQRAVA >Mature_553_residues TKFVFVTGGVVSSLGKGIAAASLAAILESRGLKVTLLKLDPYINVDPGTMSPFQHGEVFVTEDGAETDLDLGHYERFVSA KMRKANNFTTGQIYESVIRKERRGEYLGKTVQVIPHITNEIQAFIERGAKASHDGKADVAIVEIGGTVGDIESLPFLEAA RQMSLRLGRNQAAFVHLTLVPFIASAGELKTKPTQHSVQKLREIGVQPTALLCRADRPIPDDERAKISLFANMPQDAVIS VWDVDTIYKIPQMLNEQGLDRIICEELRIDAPPADLSMWSRMVHTLENPQHEITIGMVGKYVDLTESYKSLIEALRHAGL HTSTRVNIEYIDSEELESGHTQVLESLDAILVPGGFGKRGTEGKIRAIQYAREKTVPYLGICLGMQLAVIEFARHVAGMQ DANSTEFNLETEHPVVALITEWQDRDGRVEKRSADSDLGGTMRLGAQRVPVQTGTKASQIYGAEVNERHRHRYEVNNHYV PQLEKSGMIISARTPSENLPEMMELPGAMHPWFVGVQFHPEFTSTPRDGHPLFKAYVEAALAHRQRQAQRAVA
Specific function: Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen
COG id: COG0504
COG function: function code F; CTP synthase (UTP-ammonia lyase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-1 domain
Homologues:
Organism=Homo sapiens, GI148491070, Length=571, Percent_Identity=45.0087565674256, Blast_Score=481, Evalue=1e-136, Organism=Homo sapiens, GI28559085, Length=571, Percent_Identity=43.6077057793345, Blast_Score=478, Evalue=1e-135, Organism=Homo sapiens, GI28559083, Length=571, Percent_Identity=43.6077057793345, Blast_Score=478, Evalue=1e-135, Organism=Homo sapiens, GI221316689, Length=571, Percent_Identity=43.6077057793345, Blast_Score=478, Evalue=1e-135, Organism=Escherichia coli, GI1789142, Length=550, Percent_Identity=61.6363636363636, Blast_Score=696, Evalue=0.0, Organism=Caenorhabditis elegans, GI25148299, Length=609, Percent_Identity=38.752052545156, Blast_Score=422, Evalue=1e-118, Organism=Saccharomyces cerevisiae, GI6319432, Length=570, Percent_Identity=41.4035087719298, Blast_Score=447, Evalue=1e-126, Organism=Saccharomyces cerevisiae, GI6322563, Length=575, Percent_Identity=42.2608695652174, Blast_Score=442, Evalue=1e-125, Organism=Drosophila melanogaster, GI24664469, Length=571, Percent_Identity=44.1330998248687, Blast_Score=472, Evalue=1e-133, Organism=Drosophila melanogaster, GI21357815, Length=516, Percent_Identity=42.8294573643411, Blast_Score=399, Evalue=1e-111,
Paralogues:
None
Copy number: 480 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): PYRG_RALSO (Q8Y0B8)
Other databases:
- EMBL: AL646052 - RefSeq: NP_519247.1 - ProteinModelPortal: Q8Y0B8 - SMR: Q8Y0B8 - GeneID: 1219941 - GenomeReviews: AL646052_GR - KEGG: rso:RSc1126 - NMPDR: fig|267608.1.peg.1126 - HOGENOM: HBG597806 - OMA: RVTMQKL - ProtClustDB: PRK05380 - BioCyc: RSOL267608:RSC1126-MONOMER - BRENDA: 6.3.4.2 - HAMAP: MF_01227 - InterPro: IPR004468 - InterPro: IPR017456 - InterPro: IPR017926 - InterPro: IPR000991 - TIGRFAMs: TIGR00337
Pfam domain/function: PF06418 CTP_synth_N; PF00117 GATase
EC number: =6.3.4.2
Molecular weight: Translated: 61442; Mature: 61311
Theoretical pI: Translated: 6.43; Mature: 6.43
Prosite motif: PS51273 GATASE_TYPE_1; PS00442 GATASE_TYPE_I
Important sites: ACT_SITE 383-383 ACT_SITE 520-520 ACT_SITE 522-522
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKFVFVTGGVVSSLGKGIAAASLAAILESRGLKVTLLKLDPYINVDPGTMSPFQHGEVF CCEEEEEECHHHHHHCCHHHHHHHHHHHHCCCCEEEEEEECCEEECCCCCCCCCCCCEEE VTEDGAETDLDLGHYERFVSAKMRKANNFTTGQIYESVIRKERRGEYLGKTVQVIPHITN EECCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH EIQAFIERGAKASHDGKADVAIVEIGGTVGDIESLPFLEAARQMSLRLGRNQAAFVHLTL HHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEH VPFIASAGELKTKPTQHSVQKLREIGVQPTALLCRADRPIPDDERAKISLFANMPQDAVI HHHHHCCCCCCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCEEEEEECCCCCCEE SVWDVDTIYKIPQMLNEQGLDRIICEELRIDAPPADLSMWSRMVHTLENPQHEITIGMVG EEECHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECC KYVDLTESYKSLIEALRHAGLHTSTRVNIEYIDSEELESGHTQVLESLDAILVPGGFGKR CHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHCCHHHHHHHHCCEEEECCCCCCC GTEGKIRAIQYAREKTVPYLGICLGMQLAVIEFARHVAGMQDANSTEFNLETEHPVVALI CCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCEEEEE TEWQDRDGRVEKRSADSDLGGTMRLGAQRVPVQTGTKASQIYGAEVNERHRHRYEVNNHY ECCCCCCCCCCCCCCCCCCCCHHHCCCEECCCCCCCCHHHEECCCCCHHHHHHCCCCCCC VPQLEKSGMIISARTPSENLPEMMELPGAMHPWFVGVQFHPEFTSTPRDGHPLFKAYVEA CCCCCCCCEEEEECCCCCCCCHHHHCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHH ALAHRQRQAQRAVA HHHHHHHHHHHCCC >Mature Secondary Structure TKFVFVTGGVVSSLGKGIAAASLAAILESRGLKVTLLKLDPYINVDPGTMSPFQHGEVF CEEEEEECHHHHHHCCHHHHHHHHHHHHCCCCEEEEEEECCEEECCCCCCCCCCCCEEE VTEDGAETDLDLGHYERFVSAKMRKANNFTTGQIYESVIRKERRGEYLGKTVQVIPHITN EECCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH EIQAFIERGAKASHDGKADVAIVEIGGTVGDIESLPFLEAARQMSLRLGRNQAAFVHLTL HHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEH VPFIASAGELKTKPTQHSVQKLREIGVQPTALLCRADRPIPDDERAKISLFANMPQDAVI HHHHHCCCCCCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCEEEEEECCCCCCEE SVWDVDTIYKIPQMLNEQGLDRIICEELRIDAPPADLSMWSRMVHTLENPQHEITIGMVG EEECHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECC KYVDLTESYKSLIEALRHAGLHTSTRVNIEYIDSEELESGHTQVLESLDAILVPGGFGKR CHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHCCHHHHHHHHCCEEEECCCCCCC GTEGKIRAIQYAREKTVPYLGICLGMQLAVIEFARHVAGMQDANSTEFNLETEHPVVALI CCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCEEEEE TEWQDRDGRVEKRSADSDLGGTMRLGAQRVPVQTGTKASQIYGAEVNERHRHRYEVNNHY ECCCCCCCCCCCCCCCCCCCCHHHCCCEECCCCCCCCHHHEECCCCCHHHHHHCCCCCCC VPQLEKSGMIISARTPSENLPEMMELPGAMHPWFVGVQFHPEFTSTPRDGHPLFKAYVEA CCCCCCCCEEEEECCCCCCCCHHHHCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHH ALAHRQRQAQRAVA HHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11823852