Definition Ralstonia solanacearum GMI1000, complete genome.
Accession NC_003295
Length 3,716,413

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The map label for this gene is 17545844

Identifier: 17545844

GI number: 17545844

Start: 1183656

End: 1184477

Strand: Direct

Name: 17545844

Synonym: RSc1125

Alternate gene names: NA

Gene position: 1183656-1184477 (Clockwise)

Preceding gene: 17545843

Following gene: 17545845

Centisome position: 31.85

GC content: 68.86

Gene sequence:

>822_bases
ATGCGCGACGTGATGCTCTTTTCGCATGCCAACGGTTTTCCCGTCGGCACCTACCGGAAGATGCTGGACGTGCTGTCGGA
GACCTTCGACATCCATGCGGTCGAGCGCTTCGGGCACGATCCGCGTTTCCCCGTGACGCGGTCCTGGCCGGGGCTGGTCA
AGGAGCTGCTGGCCGAAATCGACGCGCAGCCCGAGCCGGTCTGGCTGGTCGGCCATTCGCTGGGCGGATTCCTGAGCCTG
ATGGCGGCGCTGCGCCGGCCCGGGCGCGTGCGCGGCGTGCTGATGCTCGATTCCCCCGTCATCGCAGGCTGGCGGGCCAG
GCTGCTGCGCATGGCGCAGTGGCTCGACATCGACGCGCGCCAATCCCCCGCGGCGGCCACCAAGAACCGTCGCAACCTGT
GGCCGGACCTCGATTCGGTCTGGACCCACTTCAAGGCCAAGCGCAAGTTCGATCGCTGGGACGAAGACGTGCTGCGCGAC
TACGTCGAGCACGGCACCGAGCCCACCGGCCGCGACGGCGAGCGCACGCTGCGCTTCTCGCGCGACATCGAATACCGGAT
CTACCGCACGCTGCCGACCAACATGGGGCGCAAGGTCGCCGGCGGTGCGCCGTTCCTGGTCAGCTTCGTGGCCGGCACGC
GCTCGCGCGAAATCCGCCAGGTCGGCCTGACGGCGACCCGCCGCCTGGTGGGCCGTCGCCTGCGCTGGATCGAGGGCAGC
CACCTGTATCCGATGGAAAAACCGCTGGAAACGGCGGGGCTGATCCGCGAACTGATCGACGAAATGCGCGCAGAGGCAGG
CGCCATGCGGCACGCCGCCTGA

Upstream 100 bases:

>100_bases
GCGCGCGCCGGGGCCCGCGTTCGGGCAGGGCGCCGCGGCGCAGCGCGTGGCCGGCGGATCGCACGAACCACACTGAACCC
GACGTCGGAGGCGCTGGCCG

Downstream 100 bases:

>100_bases
ACGGGCGAATTCGGCGGCGCCGACACGGATCGGACAGGGCACCTTTGCTATAATCCGGCTTTCCCCGGCAAGCCAGGTTT
ATGACCAAGTTCGTATTCGT

Product: hydrolase

Products: NA

Alternate protein names: Hydrolase; Alpha/Beta Hydrolase Fold Protein; Hydrolases Or Acyltransferases; Alpha/Beta Fold Family Hydrolase; Hydrolase/Acyltransferase; Alpha/Beta Superfamily Hydrolase/Acyltransferase; Hydrolase Protein; Alpha/Beta Hydrolase; Alpha/Beta Fold Superfamily Hydrolase; Hydrolase Alpha/Beta Family; Hydrolase Alpha/Beta Fold Family; Alpha/Beta Fold Hydrolase; Alpha/Beta Family Hydrolase; Alpha/Beta Hydrolase Fold-Containing Protein; Conserved Hydrolases Or Acyltransferase

Number of amino acids: Translated: 273; Mature: 273

Protein sequence:

>273_residues
MRDVMLFSHANGFPVGTYRKMLDVLSETFDIHAVERFGHDPRFPVTRSWPGLVKELLAEIDAQPEPVWLVGHSLGGFLSL
MAALRRPGRVRGVLMLDSPVIAGWRARLLRMAQWLDIDARQSPAAATKNRRNLWPDLDSVWTHFKAKRKFDRWDEDVLRD
YVEHGTEPTGRDGERTLRFSRDIEYRIYRTLPTNMGRKVAGGAPFLVSFVAGTRSREIRQVGLTATRRLVGRRLRWIEGS
HLYPMEKPLETAGLIRELIDEMRAEAGAMRHAA

Sequences:

>Translated_273_residues
MRDVMLFSHANGFPVGTYRKMLDVLSETFDIHAVERFGHDPRFPVTRSWPGLVKELLAEIDAQPEPVWLVGHSLGGFLSL
MAALRRPGRVRGVLMLDSPVIAGWRARLLRMAQWLDIDARQSPAAATKNRRNLWPDLDSVWTHFKAKRKFDRWDEDVLRD
YVEHGTEPTGRDGERTLRFSRDIEYRIYRTLPTNMGRKVAGGAPFLVSFVAGTRSREIRQVGLTATRRLVGRRLRWIEGS
HLYPMEKPLETAGLIRELIDEMRAEAGAMRHAA
>Mature_273_residues
MRDVMLFSHANGFPVGTYRKMLDVLSETFDIHAVERFGHDPRFPVTRSWPGLVKELLAEIDAQPEPVWLVGHSLGGFLSL
MAALRRPGRVRGVLMLDSPVIAGWRARLLRMAQWLDIDARQSPAAATKNRRNLWPDLDSVWTHFKAKRKFDRWDEDVLRD
YVEHGTEPTGRDGERTLRFSRDIEYRIYRTLPTNMGRKVAGGAPFLVSFVAGTRSREIRQVGLTATRRLVGRRLRWIEGS
HLYPMEKPLETAGLIRELIDEMRAEAGAMRHAA

Specific function: Unknown

COG id: COG0596

COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31296; Mature: 31296

Theoretical pI: Translated: 10.82; Mature: 10.82

Prosite motif: PS00120 LIPASE_SER ; PS00226 IF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRDVMLFSHANGFPVGTYRKMLDVLSETFDIHAVERFGHDPRFPVTRSWPGLVKELLAEI
CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHH
DAQPEPVWLVGHSLGGFLSLMAALRRPGRVRGVLMLDSPVIAGWRARLLRMAQWLDIDAR
CCCCCCEEEECCCHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHCCCCC
QSPAAATKNRRNLWPDLDSVWTHFKAKRKFDRWDEDVLRDYVEHGTEPTGRDGERTLRFS
CCCCHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCHHHHHHC
RDIEYRIYRTLPTNMGRKVAGGAPFLVSFVAGTRSREIRQVGLTATRRLVGRRLRWIEGS
CCCCEEEEEECCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
HLYPMEKPLETAGLIRELIDEMRAEAGAMRHAA
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRDVMLFSHANGFPVGTYRKMLDVLSETFDIHAVERFGHDPRFPVTRSWPGLVKELLAEI
CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHH
DAQPEPVWLVGHSLGGFLSLMAALRRPGRVRGVLMLDSPVIAGWRARLLRMAQWLDIDAR
CCCCCCEEEECCCHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHCCCCC
QSPAAATKNRRNLWPDLDSVWTHFKAKRKFDRWDEDVLRDYVEHGTEPTGRDGERTLRFS
CCCCHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCHHHHHHC
RDIEYRIYRTLPTNMGRKVAGGAPFLVSFVAGTRSREIRQVGLTATRRLVGRRLRWIEGS
CCCCEEEEEECCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
HLYPMEKPLETAGLIRELIDEMRAEAGAMRHAA
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA