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The map label for this gene is recJ [H]

Identifier: 17545834

GI number: 17545834

Start: 1170912

End: 1172609

Strand: Reverse

Name: recJ [H]

Synonym: RSc1115

Alternate gene names: 17545834

Gene position: 1172609-1170912 (Counterclockwise)

Preceding gene: 17545835

Following gene: 17545833

Centisome position: 31.55

GC content: 71.08

Gene sequence:

>1698_bases
ATGACCCGCATCGCCATCCGTCCGCATTCCGCCGAGACCGCCAGCCTGCTGGCCGGCCACGGCATCCATCCCATCCTGGC
GCGCATCCTGGCCGCGCGCGGCGTGGCCCGACCCAGCGAACTGTCGACCGAACTGACCGACCTGCTGCCGCCCGCGCAGC
TCAAGGGCATCGACGACGCGGCGCGCTACCTGGCCGACGCGATCGCCGCCGGCAAGCGCCTGCTGATCGTCGCCGACTAC
GACTGCGACGGCGCCACCGCCTGCGCGGTCGGCGTGCGCGGGCTGCGCATGCTGGGCGCGCAGGTCGGCTACATCGTGCC
CAACCGCTTCGAGTACGGCTACGGCCTGTCGCCCGAGATCGTCGCGCTGGCCGCGCGCGAGCGGCCGGACGTGCTCGTCA
CCGTCGACAACGGCATCGCCGACGTGGCGGGCGTGGCGGCGGCCAACGCGCTGGGCATCGACGTCGTCGTCACCGATCAC
CACATGCCGGGCGCGCAGTTGCCCGAGGCCCGCGTGATCGTCAACCCGAACCAGCCGGGCTGCGGCTTTCCGAGCAAGCA
CCTGGCGGGCGTGGGCGTGATGTTCTACGTGTTGCTGGCGCTGCGGGCCGAGCTGCGCAACCGCGGCGCCTTCACGCCGC
AGAACCAGCCACGCCTCGACGCGCTGCTCGACCTGGTGGCGCTCGGCACCGTGGCCGACGTGGTCCGGCTCGATGCCAAC
AACCGGCTGCTGGTGGCGCAGGGCCTCAAGCGCATGCGCGCGGGCCGGATGTGCGCCGGCATCGCGGCGCTGTTCCGCGT
GGCCGGGCGCGAGGCGCGGCGCGCATCCACCTTCGACCTCGGCTTCGGCCTGGGCCCGCGCCTGAACGCCGCCGGCCGCC
TGGCCGACATGTCGCTCGGCATCGAATGCCTGCTGACCGATGATTTCGACCGCGCCATGGCCATCGCCGCCGAGCTCGAC
GGCATGAACCGGGAGCGCCGCGAAATCGAGGCCGGCATGCAGCAGGAGGCCATGGCGATCCTCGCGTCCACGCTGGCCGG
CATGGACGGCGCCGGCCGCCACACCATCGCCGTCTACAACGAGACCTGGCACCAGGGCGTGATCGGCATCGTCGCCTCGC
GGCTCAAGGACAAGTTCCACCGGCCGGTGATCACCTTCGCGCCGGGCGACGACGGCGTCATCAAGGGCTCGGGCCGCTCC
ATCCCCGGCTTCCACCTGCGCGATGCGCTGGACGCCGTGCACAAGCGCTGCCCCGGGCTGATCGTCAAGTTCGGCGGCCA
CGCGATGGCGGCCGGGCTGTCGCTGCATGCGGACGGCTTCGACCGCTTTGTCGAGACCTTCGAGGCGGTCGGCCGCGAAT
GGCTGGACGAGTCCCTGCTCTCGCGGGTGCTCGAAACCGACGGCGAGGCCGAAGCGGAGTGCTTCACGCCGCAGTTCGTG
GAGCTGCTCGAAACCCACGTCTGGGGCCAGGGCTTTCCGGCGCCGAGCTTCTGCGGCGAGTTCGACGTGCTGTCGCAAGC
CGTGCTCAAGGACAAGCACCTGAAGCTGCAGCTCGGGCGCGGCAAGCAGCGCTTCGACGCGATCTGGTTCAACCACGCCG
AACCGCTCGGCGCCTCGGCGTACGTGGCCTACCGGCTGGACAACAACACCTTCAACGGCATCACCCGCGTGCAGATGGTG
ATCGAGCACGCGCAGTAG

Upstream 100 bases:

>100_bases
CCACCGCGAGCTGGCCGGCGGGCCGCTCGGCTGGCTGCGCCGCCTGAGCCGTCCGCGCACCCTGCGCGATGCGCTGTCCC
CGCTTTCCATCCCTGCCTGA

Downstream 100 bases:

>100_bases
CCGAACCGGCTCCACCCCCGCGCCCGCGCATATTCACATGCGAAAACTGTCTGACGGGCCACACGGGTGCCGGCCGTCGG
GCACGAGGGCTGCGCTACAA

Product: single-stranded-DNA-specific exonuclease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 565; Mature: 564

Protein sequence:

>565_residues
MTRIAIRPHSAETASLLAGHGIHPILARILAARGVARPSELSTELTDLLPPAQLKGIDDAARYLADAIAAGKRLLIVADY
DCDGATACAVGVRGLRMLGAQVGYIVPNRFEYGYGLSPEIVALAARERPDVLVTVDNGIADVAGVAAANALGIDVVVTDH
HMPGAQLPEARVIVNPNQPGCGFPSKHLAGVGVMFYVLLALRAELRNRGAFTPQNQPRLDALLDLVALGTVADVVRLDAN
NRLLVAQGLKRMRAGRMCAGIAALFRVAGREARRASTFDLGFGLGPRLNAAGRLADMSLGIECLLTDDFDRAMAIAAELD
GMNRERREIEAGMQQEAMAILASTLAGMDGAGRHTIAVYNETWHQGVIGIVASRLKDKFHRPVITFAPGDDGVIKGSGRS
IPGFHLRDALDAVHKRCPGLIVKFGGHAMAAGLSLHADGFDRFVETFEAVGREWLDESLLSRVLETDGEAEAECFTPQFV
ELLETHVWGQGFPAPSFCGEFDVLSQAVLKDKHLKLQLGRGKQRFDAIWFNHAEPLGASAYVAYRLDNNTFNGITRVQMV
IEHAQ

Sequences:

>Translated_565_residues
MTRIAIRPHSAETASLLAGHGIHPILARILAARGVARPSELSTELTDLLPPAQLKGIDDAARYLADAIAAGKRLLIVADY
DCDGATACAVGVRGLRMLGAQVGYIVPNRFEYGYGLSPEIVALAARERPDVLVTVDNGIADVAGVAAANALGIDVVVTDH
HMPGAQLPEARVIVNPNQPGCGFPSKHLAGVGVMFYVLLALRAELRNRGAFTPQNQPRLDALLDLVALGTVADVVRLDAN
NRLLVAQGLKRMRAGRMCAGIAALFRVAGREARRASTFDLGFGLGPRLNAAGRLADMSLGIECLLTDDFDRAMAIAAELD
GMNRERREIEAGMQQEAMAILASTLAGMDGAGRHTIAVYNETWHQGVIGIVASRLKDKFHRPVITFAPGDDGVIKGSGRS
IPGFHLRDALDAVHKRCPGLIVKFGGHAMAAGLSLHADGFDRFVETFEAVGREWLDESLLSRVLETDGEAEAECFTPQFV
ELLETHVWGQGFPAPSFCGEFDVLSQAVLKDKHLKLQLGRGKQRFDAIWFNHAEPLGASAYVAYRLDNNTFNGITRVQMV
IEHAQ
>Mature_564_residues
TRIAIRPHSAETASLLAGHGIHPILARILAARGVARPSELSTELTDLLPPAQLKGIDDAARYLADAIAAGKRLLIVADYD
CDGATACAVGVRGLRMLGAQVGYIVPNRFEYGYGLSPEIVALAARERPDVLVTVDNGIADVAGVAAANALGIDVVVTDHH
MPGAQLPEARVIVNPNQPGCGFPSKHLAGVGVMFYVLLALRAELRNRGAFTPQNQPRLDALLDLVALGTVADVVRLDANN
RLLVAQGLKRMRAGRMCAGIAALFRVAGREARRASTFDLGFGLGPRLNAAGRLADMSLGIECLLTDDFDRAMAIAAELDG
MNRERREIEAGMQQEAMAILASTLAGMDGAGRHTIAVYNETWHQGVIGIVASRLKDKFHRPVITFAPGDDGVIKGSGRSI
PGFHLRDALDAVHKRCPGLIVKFGGHAMAAGLSLHADGFDRFVETFEAVGREWLDESLLSRVLETDGEAEAECFTPQFVE
LLETHVWGQGFPAPSFCGEFDVLSQAVLKDKHLKLQLGRGKQRFDAIWFNHAEPLGASAYVAYRLDNNTFNGITRVQMVI
EHAQ

Specific function: Single-stranded-DNA-specific exonuclease. Required for many types of recombinational events, although the stringency of the requirement for recJ appears to vary with the type of recombinational event monitored and the other recombination gene products whi

COG id: COG0608

COG function: function code L; Single-stranded DNA-specific exonuclease

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recJ family [H]

Homologues:

Organism=Escherichia coli, GI1789259, Length=563, Percent_Identity=49.0230905861456, Blast_Score=495, Evalue=1e-141,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003156
- InterPro:   IPR001667
- InterPro:   IPR004610 [H]

Pfam domain/function: PF01368 DHH; PF02272 DHHA1 [H]

EC number: 3.1.-.- [C]

Molecular weight: Translated: 60717; Mature: 60585

Theoretical pI: Translated: 6.66; Mature: 6.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRIAIRPHSAETASLLAGHGIHPILARILAARGVARPSELSTELTDLLPPAQLKGIDDA
CCEEEECCCCCHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHCCCHHH
ARYLADAIAAGKRLLIVADYDCDGATACAVGVRGLRMLGAQVGYIVPNRFEYGYGLSPEI
HHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCEECCCCCCCCCCCCHHH
VALAARERPDVLVTVDNGIADVAGVAAANALGIDVVVTDHHMPGAQLPEARVIVNPNQPG
EEEEECCCCCEEEEECCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCEEEECCCCCC
CGFPSKHLAGVGVMFYVLLALRAELRNRGAFTPQNQPRLDALLDLVALGTVADVVRLDAN
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHEECCC
NRLLVAQGLKRMRAGRMCAGIAALFRVAGREARRASTFDLGFGLGPRLNAAGRLADMSLG
CCEEHHHHHHHHHHCHHHHHHHHHHHHHCHHHHCCCCEECCCCCCCCCCCCCCCCHHCCC
IECLLTDDFDRAMAIAAELDGMNRERREIEAGMQQEAMAILASTLAGMDGAGRHTIAVYN
EEEEEECCHHHHHHHHHHHCCCCHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCEEEEEEC
ETWHQGVIGIVASRLKDKFHRPVITFAPGDDGVIKGSGRSIPGFHLRDALDAVHKRCPGL
CCHHHHHHHHHHHHHHHHHCCCEEEECCCCCCEEECCCCCCCCHHHHHHHHHHHHHCCCE
IVKFGGHAMAAGLSLHADGFDRFVETFEAVGREWLDESLLSRVLETDGEAEAECFTPQFV
EEEECCCCHHCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCHHHH
ELLETHVWGQGFPAPSFCGEFDVLSQAVLKDKHLKLQLGRGKQRFDAIWFNHAEPLGASA
HHHHHHHCCCCCCCCHHCCCHHHHHHHHHCCCCEEEEECCCCHHHHEEEECCCCCCCCCE
YVAYRLDNNTFNGITRVQMVIEHAQ
EEEEEECCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure 
TRIAIRPHSAETASLLAGHGIHPILARILAARGVARPSELSTELTDLLPPAQLKGIDDA
CEEEECCCCCHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHCCCHHH
ARYLADAIAAGKRLLIVADYDCDGATACAVGVRGLRMLGAQVGYIVPNRFEYGYGLSPEI
HHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCEECCCCCCCCCCCCHHH
VALAARERPDVLVTVDNGIADVAGVAAANALGIDVVVTDHHMPGAQLPEARVIVNPNQPG
EEEEECCCCCEEEEECCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCEEEECCCCCC
CGFPSKHLAGVGVMFYVLLALRAELRNRGAFTPQNQPRLDALLDLVALGTVADVVRLDAN
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHEECCC
NRLLVAQGLKRMRAGRMCAGIAALFRVAGREARRASTFDLGFGLGPRLNAAGRLADMSLG
CCEEHHHHHHHHHHCHHHHHHHHHHHHHCHHHHCCCCEECCCCCCCCCCCCCCCCHHCCC
IECLLTDDFDRAMAIAAELDGMNRERREIEAGMQQEAMAILASTLAGMDGAGRHTIAVYN
EEEEEECCHHHHHHHHHHHCCCCHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCEEEEEEC
ETWHQGVIGIVASRLKDKFHRPVITFAPGDDGVIKGSGRSIPGFHLRDALDAVHKRCPGL
CCHHHHHHHHHHHHHHHHHCCCEEEECCCCCCEEECCCCCCCCHHHHHHHHHHHHHCCCE
IVKFGGHAMAAGLSLHADGFDRFVETFEAVGREWLDESLLSRVLETDGEAEAECFTPQFV
EEEECCCCHHCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCHHHH
ELLETHVWGQGFPAPSFCGEFDVLSQAVLKDKHLKLQLGRGKQRFDAIWFNHAEPLGASA
HHHHHHHCCCCCCCCHHCCCHHHHHHHHHCCCCEEEEECCCCHHHHEEEECCCCCCCCCE
YVAYRLDNNTFNGITRVQMVIEHAQ
EEEEEECCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on ester bonds [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8168497 [H]