| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
Click here to switch to the map view.
The map label for this gene is 17545835
Identifier: 17545835
GI number: 17545835
Start: 1172610
End: 1173689
Strand: Reverse
Name: 17545835
Synonym: RSc1116
Alternate gene names: NA
Gene position: 1173689-1172610 (Counterclockwise)
Preceding gene: 17545850
Following gene: 17545834
Centisome position: 31.58
GC content: 73.52
Gene sequence:
>1080_bases ATGATTCCCGAACTCACCCTAATTGTCCCGTTTTGTGCGCCGGCAGCCGAGGTGGCGGACGATGCTTACCGTCAATTGAC CCTGCCCGGCCTCGAAAGGTTGCTTGCCCGCGCCCGCGAGGCCGGCCGCGAGCGCCACGACGACGCGTACCTGCCCACGC TGCCGCACGAGCGCTGGCTGGCCGAGCACGCCGGACTGCCGGCGGGCACGCTGCCGTCCGCGCCGTACATGCGCCTGGCC GACGGCGCCGCCGCCGACACCCGCACCTGGGCCTGCCTGCAGCCGATCCATATCCACGCCGCGCGGGACCACCTGGTGAT GCTCGACCCCGGCCGGCTGCGCCTGGAAGCGGACGACGCCGAAGCGCTGCACCAGGCCATCGCCCCGCTGATCGCCGAGT CGGGTCTGACGCTGGAGGCGCCCCACCCCGCCCGCTGGTACCTGGCCGACGCGCCGTTCGGTGAACTGCGTGCCGCCGCC CCGCAGCGCGCCGCCGGCCACAATATCGACATCTGGATGCATCAGGGCGAACACGAACGCGCCTGGCGCAAGTTCCAGAA CGAGGTGCAGATGACGTGGTACGACCACCCCGTCAACCGGGCACGGGACGCGCGCGGCCTGCTGCCGGTCAATTCGGTGT GGCTGTTCGGCCAGGGCGCGCTGGTCGACGCCCGGCCGATCGCCGAGCGCATGGTCGGCGCCGATCCGTTCTTCGCCGGC CTGTGCCGCGCCGCCGGCGCGACCGAGCTGAGCGCCGCGACGCTGGCCGACCTGCCCGCCGACGGCACCGGCGCCGCCGT GCTGCTCGACGCCGCCGGCGCCCCGTTCCTGTCGGCCGACTGGTACGACTGGATCGAAGCGCTGCGCGCCTGCGACCGCG ACTGGTTCGCCCCGGCCGCCGACGCGCTGGCCGACGGCCGCATCGACGCCGTCTCGCTGGTGCTGAGCGGCGATTCGCAC TACGCCCACTACCGCATCACCCACCGCGAGCTGGCCGGCGGGCCGCTCGGCTGGCTGCGCCGCCTGAGCCGTCCGCGCAC CCTGCGCGATGCGCTGTCCCCGCTTTCCATCCCTGCCTGA
Upstream 100 bases:
>100_bases CGATCTGCCATTCGTATGGAAATTTCAAAGGGGCGTCCCCATTGGATGTGATGTAGCCGGCGCCCTCGCCAGCCAGCCGG AAGTTTACAATCTCGGGGCC
Downstream 100 bases:
>100_bases ATGACCCGCATCGCCATCCGTCCGCATTCCGCCGAGACCGCCAGCCTGCTGGCCGGCCACGGCATCCATCCCATCCTGGC GCGCATCCTGGCCGCGCGCG
Product: signal peptide protein
Products: NA
Alternate protein names: 2 3-Bisphosphoglycerate-Independent Phosphoglycerate Mutase; Regulatory Protein; Regulatory Protein RpfE; Regulatory Protein Rpfe
Number of amino acids: Translated: 359; Mature: 359
Protein sequence:
>359_residues MIPELTLIVPFCAPAAEVADDAYRQLTLPGLERLLARAREAGRERHDDAYLPTLPHERWLAEHAGLPAGTLPSAPYMRLA DGAAADTRTWACLQPIHIHAARDHLVMLDPGRLRLEADDAEALHQAIAPLIAESGLTLEAPHPARWYLADAPFGELRAAA PQRAAGHNIDIWMHQGEHERAWRKFQNEVQMTWYDHPVNRARDARGLLPVNSVWLFGQGALVDARPIAERMVGADPFFAG LCRAAGATELSAATLADLPADGTGAAVLLDAAGAPFLSADWYDWIEALRACDRDWFAPAADALADGRIDAVSLVLSGDSH YAHYRITHRELAGGPLGWLRRLSRPRTLRDALSPLSIPA
Sequences:
>Translated_359_residues MIPELTLIVPFCAPAAEVADDAYRQLTLPGLERLLARAREAGRERHDDAYLPTLPHERWLAEHAGLPAGTLPSAPYMRLA DGAAADTRTWACLQPIHIHAARDHLVMLDPGRLRLEADDAEALHQAIAPLIAESGLTLEAPHPARWYLADAPFGELRAAA PQRAAGHNIDIWMHQGEHERAWRKFQNEVQMTWYDHPVNRARDARGLLPVNSVWLFGQGALVDARPIAERMVGADPFFAG LCRAAGATELSAATLADLPADGTGAAVLLDAAGAPFLSADWYDWIEALRACDRDWFAPAADALADGRIDAVSLVLSGDSH YAHYRITHRELAGGPLGWLRRLSRPRTLRDALSPLSIPA >Mature_359_residues MIPELTLIVPFCAPAAEVADDAYRQLTLPGLERLLARAREAGRERHDDAYLPTLPHERWLAEHAGLPAGTLPSAPYMRLA DGAAADTRTWACLQPIHIHAARDHLVMLDPGRLRLEADDAEALHQAIAPLIAESGLTLEAPHPARWYLADAPFGELRAAA PQRAAGHNIDIWMHQGEHERAWRKFQNEVQMTWYDHPVNRARDARGLLPVNSVWLFGQGALVDARPIAERMVGADPFFAG LCRAAGATELSAATLADLPADGTGAAVLLDAAGAPFLSADWYDWIEALRACDRDWFAPAADALADGRIDAVSLVLSGDSH YAHYRITHRELAGGPLGWLRRLSRPRTLRDALSPLSIPA
Specific function: Unknown
COG id: COG4255
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39209; Mature: 39209
Theoretical pI: Translated: 5.83; Mature: 5.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIPELTLIVPFCAPAAEVADDAYRQLTLPGLERLLARAREAGRERHDDAYLPTLPHERWL CCCCEEEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH AEHAGLPAGTLPSAPYMRLADGAAADTRTWACLQPIHIHAARDHLVMLDPGRLRLEADDA HHHCCCCCCCCCCCCCCEECCCCCCCCCCEEEECCEEEEECCCCEEEECCCCEEEECCHH EALHQAIAPLIAESGLTLEAPHPARWYLADAPFGELRAAAPQRAAGHNIDIWMHQGEHER HHHHHHHHHHHHHCCCEEECCCCCEEEEECCCHHHHHHCCCCHHCCCCEEEEEECCCHHH AWRKFQNEVQMTWYDHPVNRARDARGLLPVNSVWLFGQGALVDARPIAERMVGADPFFAG HHHHHHHCEEEEEECCCHHHHHHCCCCCCCCCEEEECCCCEECCHHHHHHHCCCCHHHHH LCRAAGATELSAATLADLPADGTGAAVLLDAAGAPFLSADWYDWIEALRACDRDWFAPAA HHHHCCCCHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCHH DALADGRIDAVSLVLSGDSHYAHYRITHRELAGGPLGWLRRLSRPRTLRDALSPLSIPA HHHHCCCEEEEEEEEECCCCEEEEEEEHHHHCCCHHHHHHHHCCCHHHHHHHCCCCCCC >Mature Secondary Structure MIPELTLIVPFCAPAAEVADDAYRQLTLPGLERLLARAREAGRERHDDAYLPTLPHERWL CCCCEEEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH AEHAGLPAGTLPSAPYMRLADGAAADTRTWACLQPIHIHAARDHLVMLDPGRLRLEADDA HHHCCCCCCCCCCCCCCEECCCCCCCCCCEEEECCEEEEECCCCEEEECCCCEEEECCHH EALHQAIAPLIAESGLTLEAPHPARWYLADAPFGELRAAAPQRAAGHNIDIWMHQGEHER HHHHHHHHHHHHHCCCEEECCCCCEEEEECCCHHHHHHCCCCHHCCCCEEEEEECCCHHH AWRKFQNEVQMTWYDHPVNRARDARGLLPVNSVWLFGQGALVDARPIAERMVGADPFFAG HHHHHHHCEEEEEECCCHHHHHHCCCCCCCCCEEEECCCCEECCHHHHHHHCCCCHHHHH LCRAAGATELSAATLADLPADGTGAAVLLDAAGAPFLSADWYDWIEALRACDRDWFAPAA HHHHCCCCHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCHH DALADGRIDAVSLVLSGDSHYAHYRITHRELAGGPLGWLRRLSRPRTLRDALSPLSIPA HHHHCCCEEEEEEEEECCCCEEEEEEEHHHHCCCHHHHHHHHCCCHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA