| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is nagI
Identifier: 17545806
GI number: 17545806
Start: 1145035
End: 1146081
Strand: Reverse
Name: nagI
Synonym: RSc1087
Alternate gene names: NA
Gene position: 1146081-1145035 (Counterclockwise)
Preceding gene: 17545807
Following gene: 17545805
Centisome position: 30.84
GC content: 70.3
Gene sequence:
>1047_bases ATGACTTCGCAGACACTGCCGCCTGAGCGCGACACCTACTACAGCCTGCTCGGCGGGATGGGCCTGGCGCCGCTCTGGGA GTCGCTCCATGCGCTCGTTCCGCGCGAGCCGAAGCCGCGCATCGTGCCGGCGCACTGGCAATACGCGGCGATCCGCCCGC TGGTGATGCAGGCCGGCCGCATCATCAGCGCCGAAGAGGCCGTGCGCCGCGTGCTGGTGCTGGAGAACCCGGGACTGCCC GGCCGCTCCAGCATCACCTCCACGCTGTATGCCGGCCTGCAGCTGATCCTGCCGGGCGAGATCGCGCCCAGCCACCGCCA TACGCAGTCGGCGCTGCGCTTCATCGTCGAGGGCAAGGGCGCGTGGACGGCCGTCGACGGCGAGCGCACCACCATGCATC CGGGCGATTTCATCATCACGCCGTCCTGGACCTGGCACGACCACGGCTGCCCGCGCCTCGACGAAGGCGGCGAGCCGGTG GTGTGGCTCGACGGCCTGGACATTCCGCTGGTGCAGCAGTTCGATGCGGGCTTCGCCGAGAACCACCCCGAAGCGCAGCA GCCGGTGACGAGGCCCGAGGGCGACAGCTTCGCGCGCTTCGGCCACAACATGGTGCCGGTGCGGCACCGGGTGAGCGATC CCACCTCGCCGGTCTTCAGCTACCCGTACGAACGCTCGCGCGAAGCGCTGGACACGCTCTACCGCCACGGCGAGCTCGAC CCATGGGACGGTGTCAAGCTGCGCTACGTCAACCCGGCCACCGGCGGCTGGCCGATGCCGACCATCGCCACCTTCATGCA GTACCTGCCGGCGGGCTTCCGGGGCAAGACGTATCGCAGCACCGATGCCACCGTCTACTGCGTGGTGGAAGGCCGCGGCA CGGCGCACATCGGCGAGGCACGGTTCGCGTTCGCGCCGCACGACGTGTTCGTCGTGCCGTCGTGGGCACCGGTGCGCCTC GACGCGCAGGACGACGCCGTGCTGTTCAGCTATTCCGACCGGCCCGTGCTGGCCGCGCTCAACCTGCTGCGCGAGGCGCG CACCTGA
Upstream 100 bases:
>100_bases TCGGGCAAGGCGATGTGCGAGCCGCTGAGCCGCGACGTGCGGACGTATCCGATCAAGATCGAAGACGGCCACGTCTTCGT CGAACTGTGAGGGCCGCGCC
Downstream 100 bases:
>100_bases CCCCGGCCGCTCCCGATTGCCGACGCGGCGTGCCGGCCGCCGCCGGCCCCGCTCACCCTTCCGATCCGATCCGATCCGAT CCGATCCGATCCGAACCGAC
Product: gentisate 1,2-dioxygenase oxidoreductase
Products: maleylpyruvate
Alternate protein names: Cupin 2 Domain-Containing Protein; Cupin 2 Conserved Barrel Domain Protein; Cupin 2 Barrel; Cupin 2 Conserved Barrel Domain-Containing Protein; 1 2-Dioxygenase; Gentisate 1 2-Dioxygenase Oxidoreductase Protein; Cupin 2 Protein; 1-Hydroxy-2-Naphthoate Dioxygenase; Gentisate 1 2-Dioxygenase Oxidoreductase; Dioxygenase Oxidoreductase Protein; Dioxygenase
Number of amino acids: Translated: 348; Mature: 347
Protein sequence:
>348_residues MTSQTLPPERDTYYSLLGGMGLAPLWESLHALVPREPKPRIVPAHWQYAAIRPLVMQAGRIISAEEAVRRVLVLENPGLP GRSSITSTLYAGLQLILPGEIAPSHRHTQSALRFIVEGKGAWTAVDGERTTMHPGDFIITPSWTWHDHGCPRLDEGGEPV VWLDGLDIPLVQQFDAGFAENHPEAQQPVTRPEGDSFARFGHNMVPVRHRVSDPTSPVFSYPYERSREALDTLYRHGELD PWDGVKLRYVNPATGGWPMPTIATFMQYLPAGFRGKTYRSTDATVYCVVEGRGTAHIGEARFAFAPHDVFVVPSWAPVRL DAQDDAVLFSYSDRPVLAALNLLREART
Sequences:
>Translated_348_residues MTSQTLPPERDTYYSLLGGMGLAPLWESLHALVPREPKPRIVPAHWQYAAIRPLVMQAGRIISAEEAVRRVLVLENPGLP GRSSITSTLYAGLQLILPGEIAPSHRHTQSALRFIVEGKGAWTAVDGERTTMHPGDFIITPSWTWHDHGCPRLDEGGEPV VWLDGLDIPLVQQFDAGFAENHPEAQQPVTRPEGDSFARFGHNMVPVRHRVSDPTSPVFSYPYERSREALDTLYRHGELD PWDGVKLRYVNPATGGWPMPTIATFMQYLPAGFRGKTYRSTDATVYCVVEGRGTAHIGEARFAFAPHDVFVVPSWAPVRL DAQDDAVLFSYSDRPVLAALNLLREART >Mature_347_residues TSQTLPPERDTYYSLLGGMGLAPLWESLHALVPREPKPRIVPAHWQYAAIRPLVMQAGRIISAEEAVRRVLVLENPGLPG RSSITSTLYAGLQLILPGEIAPSHRHTQSALRFIVEGKGAWTAVDGERTTMHPGDFIITPSWTWHDHGCPRLDEGGEPVV WLDGLDIPLVQQFDAGFAENHPEAQQPVTRPEGDSFARFGHNMVPVRHRVSDPTSPVFSYPYERSREALDTLYRHGELDP WDGVKLRYVNPATGGWPMPTIATFMQYLPAGFRGKTYRSTDATVYCVVEGRGTAHIGEARFAFAPHDVFVVPSWAPVRLD AQDDAVLFSYSDRPVLAALNLLREART
Specific function: Unknown
COG id: COG3435
COG function: function code Q; Gentisate 1,2-dioxygenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 1.13.11.4
Molecular weight: Translated: 38719; Mature: 38588
Theoretical pI: Translated: 6.45; Mature: 6.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSQTLPPERDTYYSLLGGMGLAPLWESLHALVPREPKPRIVPAHWQYAAIRPLVMQAGR CCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCEEECCCCHHHHHHHHHHCCC IISAEEAVRRVLVLENPGLPGRSSITSTLYAGLQLILPGEIAPSHRHTQSALRFIVEGKG EECHHHHHHEEEEEECCCCCCHHHHHHHHHHCEEEEECCCCCCCHHHHHHHHHEEEECCC AWTAVDGERTTMHPGDFIITPSWTWHDHGCPRLDEGGEPVVWLDGLDIPLVQQFDAGFAE CEEEECCCCCEECCCCEEECCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHCCCCCC NHPEAQQPVTRPEGDSFARFGHNMVPVRHRVSDPTSPVFSYPYERSREALDTLYRHGELD CCCCHHCCCCCCCCCHHHHHCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCC PWDGVKLRYVNPATGGWPMPTIATFMQYLPAGFRGKTYRSTDATVYCVVEGRGTAHIGEA CCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCEEECCCCEEEEEEECCCCEEECCC RFAFAPHDVFVVPSWAPVRLDAQDDAVLFSYSDRPVLAALNLLREART EEEECCCCEEEECCCCCEEECCCCCEEEEEECCCHHHHHHHHHHHHCC >Mature Secondary Structure TSQTLPPERDTYYSLLGGMGLAPLWESLHALVPREPKPRIVPAHWQYAAIRPLVMQAGR CCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCEEECCCCHHHHHHHHHHCCC IISAEEAVRRVLVLENPGLPGRSSITSTLYAGLQLILPGEIAPSHRHTQSALRFIVEGKG EECHHHHHHEEEEEECCCCCCHHHHHHHHHHCEEEEECCCCCCCHHHHHHHHHEEEECCC AWTAVDGERTTMHPGDFIITPSWTWHDHGCPRLDEGGEPVVWLDGLDIPLVQQFDAGFAE CEEEECCCCCEECCCCEEECCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHCCCCCC NHPEAQQPVTRPEGDSFARFGHNMVPVRHRVSDPTSPVFSYPYERSREALDTLYRHGELD CCCCHHCCCCCCCCCHHHHHCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCC PWDGVKLRYVNPATGGWPMPTIATFMQYLPAGFRGKTYRSTDATVYCVVEGRGTAHIGEA CCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCEEECCCCEEEEEEECCCCEEECCC RFAFAPHDVFVVPSWAPVRLDAQDDAVLFSYSDRPVLAALNLLREART EEEECCCCEEEECCCCCEEECCCCCEEEEEECCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 2,5-dihydroxybenzoate; O2
Specific reaction: 2,5-dihydroxybenzoate + O2 = maleylpyruvate
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA