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The map label for this gene is nagAb [H]

Identifier: 17545807

GI number: 17545807

Start: 1146092

End: 1146403

Strand: Reverse

Name: nagAb [H]

Synonym: RSc1088

Alternate gene names: 17545807

Gene position: 1146403-1146092 (Counterclockwise)

Preceding gene: 17545808

Following gene: 17545806

Centisome position: 30.85

GC content: 66.03

Gene sequence:

>312_bases
ATGACGACAACCTGGTTCAAGCTCATCCCCGTCGCGGACCTGCCCGACGACGACGTGATCGCCGTCGATGCCGGCGAGGC
GGAGATCGCGCTCTACCGGGTCGCGGGCGAAGTGTTCGCGACCGACAACCTCTGCACCCACGGCCACGCCCGCCTGTGCG
ATGGCTTCCTCGACGGCCACGAGATCGAATGCCCGCTGCACCAGGGCAAGTTCGACGTGCGCTCGGGCAAGGCGATGTGC
GAGCCGCTGAGCCGCGACGTGCGGACGTATCCGATCAAGATCGAAGACGGCCACGTCTTCGTCGAACTGTGA

Upstream 100 bases:

>100_bases
TCGTCCGCACGGACGACGGGCTGAAGCTTGCGTCGCGCCTCTGCGTGTTCGACAGCGAAATGATCCCCAACTCGATCATC
TATCCGATCTGAGACCTGCC

Downstream 100 bases:

>100_bases
GGGCCGCGCCATGACTTCGCAGACACTGCCGCCTGAGCGCGACACCTACTACAGCCTGCTCGGCGGGATGGGCCTGGCGC
CGCTCTGGGAGTCGCTCCAT

Product: ferredoxin subunit of A ring-hydroxylating dioxygenase oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 103; Mature: 102

Protein sequence:

>103_residues
MTTTWFKLIPVADLPDDDVIAVDAGEAEIALYRVAGEVFATDNLCTHGHARLCDGFLDGHEIECPLHQGKFDVRSGKAMC
EPLSRDVRTYPIKIEDGHVFVEL

Sequences:

>Translated_103_residues
MTTTWFKLIPVADLPDDDVIAVDAGEAEIALYRVAGEVFATDNLCTHGHARLCDGFLDGHEIECPLHQGKFDVRSGKAMC
EPLSRDVRTYPIKIEDGHVFVEL
>Mature_102_residues
TTTWFKLIPVADLPDDDVIAVDAGEAEIALYRVAGEVFATDNLCTHGHARLCDGFLDGHEIECPLHQGKFDVRSGKAMCE
PLSRDVRTYPIKIEDGHVFVEL

Specific function: Component of naphthalene dioxygenase (NDO) multicomponent enzyme system which catalyzes the incorporation of both atoms of molecular oxygen into naphthalene to form cis- naphthalene dihydrodiol. This subunit is a 2Fe-2S ferredoxin that transfers electrons

COG id: COG2146

COG function: function code PR; Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Rieske domain [H]

Homologues:

Organism=Escherichia coli, GI1788890, Length=95, Percent_Identity=40, Blast_Score=86, Evalue=4e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017941 [H]

Pfam domain/function: PF00355 Rieske [H]

EC number: 1.-.-.-

Molecular weight: Translated: 11414; Mature: 11283

Theoretical pI: Translated: 4.45; Mature: 4.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
3.9 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTTWFKLIPVADLPDDDVIAVDAGEAEIALYRVAGEVFATDNLCTHGHARLCDGFLDGH
CCCCEEEEEECCCCCCCCEEEEECCCCEEEEEEECCEEEECCCCCCCCCCCEECCCCCCC
EIECPLHQGKFDVRSGKAMCEPLSRDVRTYPIKIEDGHVFVEL
EEECCCCCCEEECCCCCHHHHHHCCCCEEEEEEECCCEEEEEC
>Mature Secondary Structure 
TTTWFKLIPVADLPDDDVIAVDAGEAEIALYRVAGEVFATDNLCTHGHARLCDGFLDGH
CCCEEEEEECCCCCCCCEEEEECCCCEEEEEEECCEEEECCCCCCCCCCCEECCCCCCC
EIECPLHQGKFDVRSGKAMCEPLSRDVRTYPIKIEDGHVFVEL
EEECCCCCCEEECCCCCHHHHHHCCCCEEEEEEECCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA