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The map label for this gene is tISRso1

Identifier: 17545728

GI number: 17545728

Start: 1059517

End: 1060341

Strand: Reverse

Name: tISRso1

Synonym: RSc1009

Alternate gene names: NA

Gene position: 1060341-1059517 (Counterclockwise)

Preceding gene: 17545729

Following gene: 17545727

Centisome position: 28.53

GC content: 63.76

Gene sequence:

>825_bases
ATGTGGAAAAAAGAACATCGAGAGCGTGAGGCGAAGCTAGCTCGCAAGACAAAGCGTTACCCGAGCGACATGACGGATAT
CGAATGGGCCGCTGTGCAGCCGCTGCTGCCACGCGCGGCCGTGCGTGGTCGGCGTCGGGAGTGCGACTTGAGGGAGGTGG
TCAATGCCTTGCGCTATCTGGTGCGGGCGGGCTGCGGCTGGCGCATGCTGCCGCACGACTTTCCGCCGTGGCAGACCGTA
TATTGGTGGTTTCGTCGGCTCATGCGCCGCTTCCTGTTCCGCACGCTGCATGACGTGGTGCTGATGCTGGACCGGGAGCT
GGCTGGGAGGCAGCCGTGCCCGAGTGGGGGCGTCATCGACAGCCAGACAGTCAAAGCACCCTCGGCCGACAAGCGCGGCT
ACGACGCCGCCAAGAAAGTCGTCGGGCGCAAGCGGCATATCGCGGTGGACACGGATGGACGACTGCTGATGGTGAACCTG
ACACCGGCGGACATTGCCGATAGCACCGGGGCGCTGGCGGTGCTGGAAGCGGTGAAGAAGCGCTGGCCGGGTATGGAACA
CCTGTTTGCAGACGGCGCCTACGACCGCACGGCGCTGATGGACAAGGCATCGGCCCTCGACTTCGTGGTTGAGGTGGTGC
GCCGGCACGAGCAGCAAACGGGCTTTGCCGTTCTGCCGCGCCGCTGGGTGGTCGAGCGCACCTTTGGGTGGATGGTTCGC
TGGCGCCGACTTGTACGCGACTACGAGCAGCGTGCGGACGTATCGGAAGCCATGATTCATATCGCGATGAGTGGCTTGTT
ACTGCGCAGAATCGCTCATCCTTGA

Upstream 100 bases:

>100_bases
GCGCTGAACTCGCACAACATCGACGCCGTGGTCAACGCCATCGCCGAAGTGCTCTGAGAGCCCGTTTGAAAATTCCCCGC
GGTTGTGATGTAAATGCGGG

Downstream 100 bases:

>100_bases
ATTTCCAAACGGGCTCTGAGCGGAACATCCTGCCTGGCCAGCCTAGGCAAACTCGACAAAAAAGCGGCTCCGGCCGCTTT
TTTGCTGCTTATCGACTGAC

Product: ISRSO1-transposase

Products: NA

Alternate protein names: Transposase IS4 Family Protein; IS4 Family Transposase; Transposase IS5 Family Protein; Transposase And Inactivated Derivatives-Like Protein; IS5 Family Transposase; Transposase Of; LOW QUALITY PROTEIN Transposase; IS4 Insertion Sequence Transposase Protein; Transposase-Like Protein; Transposase Fragment; Transposase And Inactivated Derivatives-Like; Transposase Protein; ISXo3 Transposase ORF B; Transposase And Inactivated Derivatives; Transposase IS5 Family Protein-Like Protein; Family Transposase; Transposase IS4 Family; Transposase Is4 Family Protein; Transposon; IS4 Family Insertion Sequence Transposase Protein; Transposase Is4 Family; IS3/IS4 Family Insertion Sequence Transposase Protein; IS Transposase; ISPsy19 Transposase; Transposase IS5 Family; Isxo3 Transposase Protein; Insertion Sequence Transposase Truncated Protein

Number of amino acids: Translated: 274; Mature: 274

Protein sequence:

>274_residues
MWKKEHREREAKLARKTKRYPSDMTDIEWAAVQPLLPRAAVRGRRRECDLREVVNALRYLVRAGCGWRMLPHDFPPWQTV
YWWFRRLMRRFLFRTLHDVVLMLDRELAGRQPCPSGGVIDSQTVKAPSADKRGYDAAKKVVGRKRHIAVDTDGRLLMVNL
TPADIADSTGALAVLEAVKKRWPGMEHLFADGAYDRTALMDKASALDFVVEVVRRHEQQTGFAVLPRRWVVERTFGWMVR
WRRLVRDYEQRADVSEAMIHIAMSGLLLRRIAHP

Sequences:

>Translated_274_residues
MWKKEHREREAKLARKTKRYPSDMTDIEWAAVQPLLPRAAVRGRRRECDLREVVNALRYLVRAGCGWRMLPHDFPPWQTV
YWWFRRLMRRFLFRTLHDVVLMLDRELAGRQPCPSGGVIDSQTVKAPSADKRGYDAAKKVVGRKRHIAVDTDGRLLMVNL
TPADIADSTGALAVLEAVKKRWPGMEHLFADGAYDRTALMDKASALDFVVEVVRRHEQQTGFAVLPRRWVVERTFGWMVR
WRRLVRDYEQRADVSEAMIHIAMSGLLLRRIAHP
>Mature_274_residues
MWKKEHREREAKLARKTKRYPSDMTDIEWAAVQPLLPRAAVRGRRRECDLREVVNALRYLVRAGCGWRMLPHDFPPWQTV
YWWFRRLMRRFLFRTLHDVVLMLDRELAGRQPCPSGGVIDSQTVKAPSADKRGYDAAKKVVGRKRHIAVDTDGRLLMVNL
TPADIADSTGALAVLEAVKKRWPGMEHLFADGAYDRTALMDKASALDFVVEVVRRHEQQTGFAVLPRRWVVERTFGWMVR
WRRLVRDYEQRADVSEAMIHIAMSGLLLRRIAHP

Specific function: Unknown

COG id: COG3293

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31908; Mature: 31908

Theoretical pI: Translated: 10.96; Mature: 10.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWKKEHREREAKLARKTKRYPSDMTDIEWAAVQPLLPRAAVRGRRRECDLREVVNALRYL
CCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
VRAGCGWRMLPHDFPPWQTVYWWFRRLMRRFLFRTLHDVVLMLDRELAGRQPCPSGGVID
HHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
SQTVKAPSADKRGYDAAKKVVGRKRHIAVDTDGRLLMVNLTPADIADSTGALAVLEAVKK
CCCCCCCCCCCCCHHHHHHHHCCCCEEEECCCCCEEEEECCCHHHCCCCHHHHHHHHHHH
RWPGMEHLFADGAYDRTALMDKASALDFVVEVVRRHEQQTGFAVLPRRWVVERTFGWMVR
HCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
WRRLVRDYEQRADVSEAMIHIAMSGLLLRRIAHP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA