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The map label for this gene is 17545539

Identifier: 17545539

GI number: 17545539

Start: 862903

End: 863580

Strand: Reverse

Name: 17545539

Synonym: RSc0820

Alternate gene names: NA

Gene position: 863580-862903 (Counterclockwise)

Preceding gene: 17545546

Following gene: 17545538

Centisome position: 23.24

GC content: 61.21

Gene sequence:

>678_bases
GTGAAGACAGCCCGTACACCCGTCAAACCCAGGAAACTTCCCACACAGGAGCGTTCGCGGGCCACCGTGGACGCCATAAT
GCAAGCAGCAACTTACATTCTGGTGAAGTTCGGGTGGGAACGCCTGACAACCAACGCGATCGCGGAGCGTGCCGGCGTGA
ACATCGGCTCGCTCTATCAATACTTTCCGAACAAGCAGGCGATCATTGCCGAACTGCAGCGGCGCCATGTCCTTCAGACA
CGCGAGATACTGTCAAAGGCGCTTCCGCAAGTCTCCGAGCAGCGCTCGCTGCGCGAGGCGCTGACCCTGCTTGTCGTCGC
GATGATTGATGAGCATCGCGTTGCGCCCGCGGTTCATCGAGCGATCGATGCGGAGTTGCCGCGATCGGTAAGGGTTCCGC
TGGGTGACGAGAGTCGCGGCGGCGACCAGCCTTTGCAAGTGCTGCAACCCTTCATGAAGAACGTGCCCGATCCCCACTTT
GCGCTCCGGATCGCACGCATCGCGGCGCACGCCGTCATCCACGAAGCGGCCTCGCATCAGCCTGAACTGTTCGATCGCCC
CGATTTCGTCGATGAGGTCGTTGCGCTTTTGGAGGGGTACTTCCGACGCCCAGCGGCAAGATCTGCCGTTGAAATCGGGC
GCGTGCCCGTGAAGAAGGCAACCCGCTCGAAGCGTTGA

Upstream 100 bases:

>100_bases
CGCCTGGAAGGCGCCCCAAAGTATGGATGTGTCTTGCGTTTTCATGCCGAGATCGTAAGCTTTAGCTTATTTTTCTGATA
CTCGCATTCGGACGCAACGC

Downstream 100 bases:

>100_bases
CATCAGAGTGCGCTCGATGGGCTTGGCAACGTGTCGGCAACGCCCCGGCGCGGCACGCTGAAGAGGGTGCCAGCGTATTA
CGCGTCAGCCATCTACCCCG

Product: transcription regulator protein

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Transcriptional Regulatory Protein; Regulatory Protein TetR; Transcriptional Regulator TetR Family Protein; TetR Family Transcriptional Regulatory Protein; Transcription Regulator Protein; Transcriptional Regulator Protein; Kregulator TetR Family; AcrR Family Transcriptional Regulator; Transcriptional Regulator Protein TetR Family; TetR Family Regulatory Protein; TetR Family Regulatory

Number of amino acids: Translated: 225; Mature: 225

Protein sequence:

>225_residues
MKTARTPVKPRKLPTQERSRATVDAIMQAATYILVKFGWERLTTNAIAERAGVNIGSLYQYFPNKQAIIAELQRRHVLQT
REILSKALPQVSEQRSLREALTLLVVAMIDEHRVAPAVHRAIDAELPRSVRVPLGDESRGGDQPLQVLQPFMKNVPDPHF
ALRIARIAAHAVIHEAASHQPELFDRPDFVDEVVALLEGYFRRPAARSAVEIGRVPVKKATRSKR

Sequences:

>Translated_225_residues
MKTARTPVKPRKLPTQERSRATVDAIMQAATYILVKFGWERLTTNAIAERAGVNIGSLYQYFPNKQAIIAELQRRHVLQT
REILSKALPQVSEQRSLREALTLLVVAMIDEHRVAPAVHRAIDAELPRSVRVPLGDESRGGDQPLQVLQPFMKNVPDPHF
ALRIARIAAHAVIHEAASHQPELFDRPDFVDEVVALLEGYFRRPAARSAVEIGRVPVKKATRSKR
>Mature_225_residues
MKTARTPVKPRKLPTQERSRATVDAIMQAATYILVKFGWERLTTNAIAERAGVNIGSLYQYFPNKQAIIAELQRRHVLQT
REILSKALPQVSEQRSLREALTLLVVAMIDEHRVAPAVHRAIDAELPRSVRVPLGDESRGGDQPLQVLQPFMKNVPDPHF
ALRIARIAAHAVIHEAASHQPELFDRPDFVDEVVALLEGYFRRPAARSAVEIGRVPVKKATRSKR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25295; Mature: 25295

Theoretical pI: Translated: 10.94; Mature: 10.94

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTARTPVKPRKLPTQERSRATVDAIMQAATYILVKFGWERLTTNAIAERAGVNIGSLYQ
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
YFPNKQAIIAELQRRHVLQTREILSKALPQVSEQRSLREALTLLVVAMIDEHRVAPAVHR
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AIDAELPRSVRVPLGDESRGGDQPLQVLQPFMKNVPDPHFALRIARIAAHAVIHEAASHQ
HHHHHCCCCEECCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCC
PELFDRPDFVDEVVALLEGYFRRPAARSAVEIGRVPVKKATRSKR
CCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHCCCHHHHHCCCC
>Mature Secondary Structure
MKTARTPVKPRKLPTQERSRATVDAIMQAATYILVKFGWERLTTNAIAERAGVNIGSLYQ
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
YFPNKQAIIAELQRRHVLQTREILSKALPQVSEQRSLREALTLLVVAMIDEHRVAPAVHR
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AIDAELPRSVRVPLGDESRGGDQPLQVLQPFMKNVPDPHFALRIARIAAHAVIHEAASHQ
HHHHHCCCCEECCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCC
PELFDRPDFVDEVVALLEGYFRRPAARSAVEIGRVPVKKATRSKR
CCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHCCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA