| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is 17545538
Identifier: 17545538
GI number: 17545538
Start: 862468
End: 862872
Strand: Reverse
Name: 17545538
Synonym: RSc0819
Alternate gene names: NA
Gene position: 862872-862468 (Counterclockwise)
Preceding gene: 17545539
Following gene: 17545535
Centisome position: 23.22
GC content: 63.21
Gene sequence:
>405_bases GTGTCGGCAACGCCCCGGCGCGGCACGCTGAAGAGGGTGCCAGCGTATTACGCGTCAGCCATCTACCCCGTTCGGGAGCC GAGGCCATCACGGCCAGGCAACCTATTCGCTACGGGATCTCCGCACGCCTTGACGTTCAGGACTGATCGGTACAGAACCT TTCCGGCGTTTCCGGGCTTCAGCTTCCAAATCGAGCGGATGGTCGCCGAGGGTGATCAGGTGGCCGCCTACCTGGTCTTC GACGGCGAACACAAGAGCGGCGTGATCGATGGCATCGCCCCTGCGGGCAAGCGCCTGCGCTTTTCGCTGCTGATGCTGCT GACGATCTCGGATGGGAAGATCATCGAGAAGCGAGCGCACTTCGATCGCATGGACATCCATCGGCAGCTCGCGGGCGAGC CCTGA
Upstream 100 bases:
>100_bases CCCAGCGGCAAGATCTGCCGTTGAAATCGGGCGCGTGCCCGTGAAGAAGGCAACCCGCTCGAAGCGTTGACATCAGAGTG CGCTCGATGGGCTTGGCAAC
Downstream 100 bases:
>100_bases TCACCCACCACCGCTTACTCGGAAAACTGCACCTTCCCCTGGACAAAATAGGGCTTGCTGCACGGCGATGCCTCGCCCGC CTTCTGGGGTGTGCAATCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 134; Mature: 133
Protein sequence:
>134_residues MSATPRRGTLKRVPAYYASAIYPVREPRPSRPGNLFATGSPHALTFRTDRYRTFPAFPGFSFQIERMVAEGDQVAAYLVF DGEHKSGVIDGIAPAGKRLRFSLLMLLTISDGKIIEKRAHFDRMDIHRQLAGEP
Sequences:
>Translated_134_residues MSATPRRGTLKRVPAYYASAIYPVREPRPSRPGNLFATGSPHALTFRTDRYRTFPAFPGFSFQIERMVAEGDQVAAYLVF DGEHKSGVIDGIAPAGKRLRFSLLMLLTISDGKIIEKRAHFDRMDIHRQLAGEP >Mature_133_residues SATPRRGTLKRVPAYYASAIYPVREPRPSRPGNLFATGSPHALTFRTDRYRTFPAFPGFSFQIERMVAEGDQVAAYLVFD GEHKSGVIDGIAPAGKRLRFSLLMLLTISDGKIIEKRAHFDRMDIHRQLAGEP
Specific function: Unknown
COG id: COG5485
COG function: function code R; Predicted ester cyclase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15021; Mature: 14890
Theoretical pI: Translated: 10.62; Mature: 10.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSATPRRGTLKRVPAYYASAIYPVREPRPSRPGNLFATGSPHALTFRTDRYRTFPAFPGF CCCCCCCCCHHHCCHHHHHEECCCCCCCCCCCCCEEECCCCCEEEEECCCEEECCCCCCC SFQIERMVAEGDQVAAYLVFDGEHKSGVIDGIAPAGKRLRFSLLMLLTISDGKIIEKRAH CEEEHEECCCCCCEEEEEEECCCCCCCCCCCCCCCCCHHEEEEEEEEEECCCCEEHHHHC FDRMDIHRQLAGEP CCHHHHHHHHCCCC >Mature Secondary Structure SATPRRGTLKRVPAYYASAIYPVREPRPSRPGNLFATGSPHALTFRTDRYRTFPAFPGF CCCCCCCCHHHCCHHHHHEECCCCCCCCCCCCCEEECCCCCEEEEECCCEEECCCCCCC SFQIERMVAEGDQVAAYLVFDGEHKSGVIDGIAPAGKRLRFSLLMLLTISDGKIIEKRAH CEEEHEECCCCCCEEEEEEECCCCCCCCCCCCCCCCCHHEEEEEEEEEECCCCEEHHHHC FDRMDIHRQLAGEP CCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA